RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 DHRS7BQ6IAN0 325 aaPredicted RBP6.2□□□□□ -1.42
NPHP3-208ENST00000490993 TPRX1Q8N7U7 411 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 OR4D5Q8NGN0 318 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 RNF2Q99496 336 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 PSMG3Q9BT73 122 aaPredicted RBP6.2□□□□□ -1.42
NPHP3-208ENST00000490993 VAX2Q9UIW0 290 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 URB1O60287 2271 aaKnown RBP6.2□□□□□ -1.42
NPHP3-208ENST00000490993 H7BYZ3 331 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 CCL21O00585 134 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 IGHV3-13P01766 116 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 GYPAP02724 150 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 FAM74A3Q4VXF1 159 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 NCR3LG1Q68D85 454 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 BTNL8Q6UX41 500 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 OR8B3Q8NGG8 313 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 OR8B2Q96RD0 313 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 SLC25A15Q9Y619 301 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 CTXND1A0A1B0GTU2 59 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 RHOBP62745 196 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 KLRB1Q12918 225 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 IGFL2Q6UWQ7 119 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 Q8NFD4 153 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 CEP192Q8TEP8 1941 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 IGKV1D-13A0A0B4J2D9 117 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 PPP1R2P9O14990 202 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 GFRA3O60609 400 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 CNIH1O95406 144 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 IGKV1-13P0DP09 117 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 SPP1P10451 314 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 ATP5IP56385 69 aaPredicted RBP6.2□□□□□ -1.42
NPHP3-208ENST00000490993 CCL8P80075 99 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 S100A12P80511 92 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 FOXF2Q12947 444 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 LHFPL5Q8TAF8 219 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 TIMM9Q9Y5J7 89 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 AUP1Q9Y679 476 aa6.2□□□□□ -1.42
NPHP3-208ENST00000490993 CEACAM3P40198 252 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 FAM27E3Q08E93 113 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 STUMQ69YW2 141 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 Q6P435 159 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 RTN4RL2Q86UN3 420 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 FLYWCH2Q96CP2 140 aaKnown RBP6.19□□□□□ -1.42
NPHP3-208ENST00000490993 SLC45A2Q9UMX9 530 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 ATG2AQ2TAZ0 1938 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 AHCTF1Q8WYP5 2266 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 IGSF23A1L1A6 192 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 WIPF3A6NGB9 483 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 B9A039 149 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 DEFA4P12838 97 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 ID3Q02535 119 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 SIRT7Q9NRC8 400 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 COA4Q9NYJ1 87 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 CLN8Q9UBY8 286 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 MEX3AA1L020 520 aaKnown RBP6.19□□□□□ -1.42
NPHP3-208ENST00000490993 MARCH11A6NNE9 402 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 YPEL1O60688 119 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 HSPB1P04792 205 aaKnown RBP6.19□□□□□ -1.42
NPHP3-208ENST00000490993 RPS2P15880 293 aaKnown RBP6.19□□□□□ -1.42
NPHP3-208ENST00000490993 TMEM241Q24JQ0 296 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 ADAM5Q6NVV9 412 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 MOB3BQ86TA1 216 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 RPEQ96AT9 228 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 YPEL2Q96QA6 119 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 PFDN5Q99471 154 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 CARHSP1Q9Y2V2 147 aaKnown RBP6.19□□□□□ -1.42
NPHP3-208ENST00000490993 S1PR2O95136 353 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 MC5RP33032 325 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 SSTR5P35346 364 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 MEF2CQ06413 473 aaPredicted RBP6.19□□□□□ -1.42
NPHP3-208ENST00000490993 AWAT1Q58HT5 328 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 OR13A1Q8NGR1 328 aa6.19□□□□□ -1.42
NPHP3-208ENST00000490993 RPUSD4Q96CM3 377 aaKnown RBP6.19□□□□□ -1.42
NPHP3-208ENST00000490993 CYB5R3P00387 301 aaPredicted RBP6.18□□□□□ -1.42
NPHP3-208ENST00000490993 NPY1RP25929 384 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 CD1BP29016 333 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 NBL1P41271 181 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 HES1Q14469 280 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 TGIF2LYQ8IUE0 185 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 TGIF2LXQ8IUE1 241 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 TAF15Q92804 592 aaKnown RBP eCLIP6.18□□□□□ -1.42
NPHP3-208ENST00000490993 NAT8Q9UHE5 227 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 OR51B2Q9Y5P1 312 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 FAM90A9PA6NNJ1 464 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 CLDN34H7C241 214 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 SPINK9Q5DT21 86 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 P2RX4Q99571 388 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 CYTL1Q9NRR1 136 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 RNF115Q9Y4L5 304 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 KBTBD11-OT1A0A1B0GTJ5 212 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 SRRM5B3KS81 715 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 PPIHO43447 177 aaKnown RBP6.18□□□□□ -1.42
NPHP3-208ENST00000490993 IGHV3-7P01780 117 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 APOBEC3AP31941 199 aaPredicted RBP6.18□□□□□ -1.42
NPHP3-208ENST00000490993 OR1L8Q8NGR8 309 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 GPHA2Q96T91 129 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 SLC25A22Q9H936 323 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 ONECUT1Q9UBC0 465 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 PPP5D1E7EU14 171 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 COX7A2P2O60397 106 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 PTBP3O95758 552 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms