RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 PYCARDQ9ULZ3 195 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 CCL15-CCL14A0A0B4J2E2 113 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 COLCA2A8K830 154 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 F5H5P2 479 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 LGALS9O00182 355 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 TCF21O43680 179 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 GCM2O75603 506 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 MT-CO2P00403 227 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 IGKV1-17P01599 117 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 PPBPP02775 128 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 SOD3P08294 240 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 OR12D1P0DN82 309 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 CYBAP13498 195 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 CTLA4P16410 223 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 CTBP2P56545 445 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 HSPE1P61604 102 aaKnown RBP2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 CDK5Q00535 292 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 APOFQ13790 326 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 CCL15Q16663 113 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 IAH1Q2TAA2 248 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 BRMS1LQ5PSV4 323 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 GLYATQ6IB77 296 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 LPCAT3Q6P1A2 487 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 TBPL2Q6SJ96 375 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 ZBTB8OSQ8IWT0 167 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 ZNF567Q8N184 647 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 EIF4E3Q8N5X7 224 aaKnown RBP2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 OR52N1Q8NH53 320 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 ZNRF2Q8NHG8 242 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 OLFM3Q96PB7 478 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 KLF6Q99612 283 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 ZNF649Q9BS31 505 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 ABCG5Q9H222 651 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 SPANXA1Q9NS26 97 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 MRPL27Q9P0M9 148 aaKnown RBP2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 ENOPH1Q9UHY7 261 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 LINC00527Q9UJ94 153 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 WASHC3Q9Y3C0 194 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 RFNGQ9Y644 331 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 SYNMO15061 1565 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 KIF15Q9NS87 1388 aa2.73□□□□□ -1.97
HMGB1P38-201ENST00000490557 TRAV8-1A0A0A6YYK1 113 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 C9JQL5 133 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 PIK3C2GO75747 1445 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 OR10J4P0C629 311 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 C1GALT1C1LP0DN25 315 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 IMPA1P29218 277 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 RHOBP62745 196 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 RBX1P62877 108 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 RUNX1Q01196 453 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 TMEM267Q0VDI3 215 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 C1orf194Q5T5A4 169 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 Q5W150 140 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 CEMP1Q6PRD7 247 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 ALKAL1Q6UXT8 129 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 Q6ZRU5 148 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 FAM19A3Q7Z5A8 133 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 DEFB125Q8N687 156 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 ZNF645Q8N7E2 425 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 OR52L1Q8NGH7 329 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 OR8S1Q8NH09 359 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 OR51H1Q8NH63 302 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 GNPDA2Q8TDQ7 276 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 C11orf40Q8WZ69 217 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 L3HYPDHQ96EM0 354 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 SLC25A44Q96H78 314 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 CAMK2N2Q96S95 79 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 ZNF436Q9C0F3 470 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 PARVBQ9HBI1 364 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 TMEM138Q9NPI0 162 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 C14orf105Q9NVL8 296 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 GSKIPQ9P0R6 139 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 SS18L2Q9UHA2 77 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 RSL24D1Q9UHA3 163 aaKnown RBP2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 PAIP2BQ9ULR5 123 aaKnown RBP2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 FIS1Q9Y3D6 152 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 TMEM56-RWDD3S4R434 201 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 MYO15BQ96JP2 1530 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 GPATCH8Q9UKJ3 1502 aaKnown RBP2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 ARHGEF10O15013 1369 aa2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 NUP214P35658 2090 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P38-201ENST00000490557 TMEM131Q92545 1883 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 C2orf16Q68DN1 1984 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 NPATQ14207 1427 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 CABIN1Q9Y6J0 2220 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 FAM236DA0A1B0GTK5 79 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 hADV38S2A0JD32 116 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 B4DEV8 164 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 G3V2T6 193 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 HMGB3O15347 200 aaKnown RBP2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 RGS5O15539 181 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 ORC5O43913 435 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 EIF1BO60739 113 aaKnown RBP2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 PFN1P07737 140 aaKnown RBP2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 FBP1P09467 338 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 FAM236CP0DP71 79 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 FGF6P10767 208 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 CTSEP14091 401 aa2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 ZNF14P17017 642 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P38-201ENST00000490557 S100A1P23297 94 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms