RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 ZNF645Q8N7E2 425 aa12.96□□□□□ -0.33
CLIC4-203ENST00000489758 PIFOQ8TCI5 191 aa12.96□□□□□ -0.33
CLIC4-203ENST00000489758 CFHR4Q92496 578 aa12.96□□□□□ -0.33
CLIC4-203ENST00000489758 MRPL20Q9BYC9 149 aaKnown RBP12.96□□□□□ -0.33
CLIC4-203ENST00000489758 SLC2A8Q9NY64 477 aa12.96□□□□□ -0.33
CLIC4-203ENST00000489758 RBM7Q9Y580 266 aaKnown RBP12.96□□□□□ -0.33
CLIC4-203ENST00000489758 MXRA5Q9NR99 2828 aa12.95□□□□□ -0.34
CLIC4-203ENST00000489758 WNK2Q9Y3S1 2297 aa12.95□□□□□ -0.34
CLIC4-203ENST00000489758 IGHV1-3A0A0C4DH29 117 aa12.95□□□□□ -0.34
CLIC4-203ENST00000489758 DISC1C4P0D8 188 aa12.95□□□□□ -0.34
CLIC4-203ENST00000489758 TIMM23O14925 209 aa12.95□□□□□ -0.34
CLIC4-203ENST00000489758 GNRHRP30968 328 aa12.95□□□□□ -0.34
CLIC4-203ENST00000489758 IER3P46695 156 aa12.95□□□□□ -0.34
CLIC4-203ENST00000489758 EIF4EBP1Q13541 118 aaPredicted RBP12.95□□□□□ -0.34
CLIC4-203ENST00000489758 HABP2Q14520 560 aaPredicted RBP12.95□□□□□ -0.34
CLIC4-203ENST00000489758 MSMO1Q15800 293 aa12.95□□□□□ -0.34
CLIC4-203ENST00000489758 CCDC144NLQ6NUI1 221 aa12.95□□□□□ -0.34
CLIC4-203ENST00000489758 TMEM17Q86X19 198 aa12.95□□□□□ -0.34
CLIC4-203ENST00000489758 TGIF2LXQ8IUE1 241 aa12.95□□□□□ -0.34
CLIC4-203ENST00000489758 OR51S1Q8NGJ8 323 aa12.95□□□□□ -0.34
CLIC4-203ENST00000489758 SECTM1Q8WVN6 248 aa12.95□□□□□ -0.34
CLIC4-203ENST00000489758 S1PR3Q99500 378 aa12.95□□□□□ -0.34
CLIC4-203ENST00000489758 NABP2Q9BQ15 211 aa12.95□□□□□ -0.34
CLIC4-203ENST00000489758 SLC5A7Q9GZV3 580 aa12.95□□□□□ -0.34
CLIC4-203ENST00000489758 CCL28Q9NRJ3 127 aa12.95□□□□□ -0.34
CLIC4-203ENST00000489758 M0R1X1 148 aa12.94□□□□□ -0.34
CLIC4-203ENST00000489758 TXNL1O43396 289 aa12.94□□□□□ -0.34
CLIC4-203ENST00000489758 UPK1BO75841 260 aa12.94□□□□□ -0.34
CLIC4-203ENST00000489758 SLC22A5O76082 557 aa12.94□□□□□ -0.34
CLIC4-203ENST00000489758 CT45A6P0DMU7 189 aa12.94□□□□□ -0.34
CLIC4-203ENST00000489758 CT45A5P0DMU8 189 aa12.94□□□□□ -0.34
CLIC4-203ENST00000489758 CT45A7P0DMV0 189 aa12.94□□□□□ -0.34
CLIC4-203ENST00000489758 RAB13P51153 203 aa12.94□□□□□ -0.34
CLIC4-203ENST00000489758 UCP3P55916 312 aa12.94□□□□□ -0.34
CLIC4-203ENST00000489758 LINC00205P59089 165 aa12.94□□□□□ -0.34
CLIC4-203ENST00000489758 IFITM3Q01628 133 aa12.94□□□□□ -0.34
CLIC4-203ENST00000489758 LRRC75BQ2VPJ9 315 aa12.94□□□□□ -0.34
CLIC4-203ENST00000489758 FBLN7Q53RD9 439 aa12.94□□□□□ -0.34
CLIC4-203ENST00000489758 OR13C8Q8NGS7 320 aa12.94□□□□□ -0.34
CLIC4-203ENST00000489758 TERB2Q8NHR7 220 aa12.94□□□□□ -0.34
CLIC4-203ENST00000489758 ZDHHC16Q969W1 377 aa12.94□□□□□ -0.34
CLIC4-203ENST00000489758 SSX3Q99909 188 aa12.94□□□□□ -0.34
CLIC4-203ENST00000489758 OCEL1Q9H607 264 aa12.94□□□□□ -0.34
CLIC4-203ENST00000489758 ESM1Q9NQ30 184 aa12.94□□□□□ -0.34
CLIC4-203ENST00000489758 LINC00854A0A1B0GVQ3 168 aa12.93□□□□□ -0.34
CLIC4-203ENST00000489758 FAM90A9PA6NNJ1 464 aa12.93□□□□□ -0.34
CLIC4-203ENST00000489758 PLA2G10O15496 165 aa12.93□□□□□ -0.34
CLIC4-203ENST00000489758 HOXA3O43365 443 aaPredicted RBP12.93□□□□□ -0.34
CLIC4-203ENST00000489758 IGHV4-59P01825 116 aa12.93□□□□□ -0.34
CLIC4-203ENST00000489758 FAUP35544 74 aaKnown RBP12.93□□□□□ -0.34
CLIC4-203ENST00000489758 INPP1P49441 399 aa12.93□□□□□ -0.34
CLIC4-203ENST00000489758 SCGB2B2Q4G0G5 96 aa12.93□□□□□ -0.34
CLIC4-203ENST00000489758 ZNF818PQ6ZRF7 136 aa12.93□□□□□ -0.34
CLIC4-203ENST00000489758 MOB3BQ86TA1 216 aa12.93□□□□□ -0.34
CLIC4-203ENST00000489758 ZNF383Q8NA42 475 aa12.93□□□□□ -0.34
CLIC4-203ENST00000489758 DRAXINQ8NBI3 349 aaPredicted RBP12.93□□□□□ -0.34
CLIC4-203ENST00000489758 RBMXL1Q96E39 390 aaKnown RBP12.93□□□□□ -0.34
CLIC4-203ENST00000489758 PRRT1Q99946 306 aa12.93□□□□□ -0.34
CLIC4-203ENST00000489758 RSRP1Q9BUV0 290 aa12.93□□□□□ -0.34
CLIC4-203ENST00000489758 ABCB10Q9NRK6 738 aa12.93□□□□□ -0.34
CLIC4-203ENST00000489758 MCUBQ9NWR8 336 aa12.93□□□□□ -0.34
CLIC4-203ENST00000489758 H3BUX3 64 aa12.92□□□□□ -0.34
CLIC4-203ENST00000489758 CD24P25063 80 aa12.92□□□□□ -0.34
CLIC4-203ENST00000489758 DUTP33316 252 aaKnown RBP12.92□□□□□ -0.34
CLIC4-203ENST00000489758 BTCP35070 178 aa12.92□□□□□ -0.34
CLIC4-203ENST00000489758 HILS1P60008 231 aa12.92□□□□□ -0.34
CLIC4-203ENST00000489758 RBMS3Q6XE24 437 aaKnown RBP12.92□□□□□ -0.34
CLIC4-203ENST00000489758 IDO2Q6ZQW0 420 aa12.92□□□□□ -0.34
CLIC4-203ENST00000489758 BVESQ8NE79 360 aa12.92□□□□□ -0.34
CLIC4-203ENST00000489758 OR5AN1Q8NGI8 311 aa12.92□□□□□ -0.34
CLIC4-203ENST00000489758 ZNF418Q8TF45 676 aaPredicted RBP12.92□□□□□ -0.34
CLIC4-203ENST00000489758 SSMEM1Q8WWF3 244 aa12.92□□□□□ -0.34
CLIC4-203ENST00000489758 DDB2Q92466 427 aa12.92□□□□□ -0.34
CLIC4-203ENST00000489758 AKR1E2Q96JD6 320 aa12.92□□□□□ -0.34
CLIC4-203ENST00000489758 TSC22D3Q99576 134 aa12.92□□□□□ -0.34
CLIC4-203ENST00000489758 TBC1D24Q9ULP9 559 aa12.92□□□□□ -0.34
CLIC4-203ENST00000489758 IGHV3-72A0A0B4J1Y9 119 aa12.91□□□□□ -0.34
CLIC4-203ENST00000489758 DNAJC9-AS1A6NH13 148 aa12.91□□□□□ -0.34
CLIC4-203ENST00000489758 H0YJW9 148 aa12.91□□□□□ -0.34
CLIC4-203ENST00000489758 VENTXO95231 258 aa12.91□□□□□ -0.34
CLIC4-203ENST00000489758 CD1BP29016 333 aa12.91□□□□□ -0.34
CLIC4-203ENST00000489758 BRS3P32247 399 aa12.91□□□□□ -0.34
CLIC4-203ENST00000489758 ARHGDIBP52566 201 aa12.91□□□□□ -0.34
CLIC4-203ENST00000489758 RPL30P62888 115 aaKnown RBP12.91□□□□□ -0.34
CLIC4-203ENST00000489758 BAMBIQ13145 260 aa12.91□□□□□ -0.34
CLIC4-203ENST00000489758 EBI3Q14213 229 aa12.91□□□□□ -0.34
CLIC4-203ENST00000489758 SLC9A3R2Q15599 337 aa12.91□□□□□ -0.34
CLIC4-203ENST00000489758 GLDNQ6ZMI3 551 aaPredicted RBP12.91□□□□□ -0.34
CLIC4-203ENST00000489758 SLC38A6Q8IZM9 456 aa12.91□□□□□ -0.34
CLIC4-203ENST00000489758 TMEM86BQ8N661 226 aa12.91□□□□□ -0.34
CLIC4-203ENST00000489758 ZDHHC22Q8N966 263 aa12.91□□□□□ -0.34
CLIC4-203ENST00000489758 ZBTB34Q8NCN2 500 aa12.91□□□□□ -0.34
CLIC4-203ENST00000489758 MARCH1Q8TCQ1 289 aa12.91□□□□□ -0.34
CLIC4-203ENST00000489758 GPHA2Q96T91 129 aa12.91□□□□□ -0.34
CLIC4-203ENST00000489758 C7orf50Q9BRJ6 194 aaKnown RBP12.91□□□□□ -0.34
CLIC4-203ENST00000489758 DPAGT1Q9H3H5 408 aa12.91□□□□□ -0.34
CLIC4-203ENST00000489758 SCP2D1Q9UJQ7 156 aa12.91□□□□□ -0.34
CLIC4-203ENST00000489758 POMT1Q9Y6A1 747 aa12.91□□□□□ -0.34
CLIC4-203ENST00000489758 NAV3Q8IVL0 2385 aa12.9□□□□□ -0.34
CLIC4-203ENST00000489758 A6NDX4 124 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms