RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 RNF13O43567 381 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 MFSD11O43934 449 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 UGT2B11O75310 529 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 IFNA14P01570 189 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 GLAP06280 429 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 CFHR2P36980 270 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 MYCNOSP40205 109 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 KIR3DL2P43630 455 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 CARD18P57730 90 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 RGS8P57771 180 aaPredicted RBP2.06□□□□□ -2.08
ITGB1-214ENST00000488427 BTN3A2P78410 334 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 IL5RAQ01344 420 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 PLCXD2Q0VAA5 305 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 BIKQ13323 160 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 ITIH4Q14624 930 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 TAF1AQ15573 450 aaPredicted RBP2.06□□□□□ -2.08
ITGB1-214ENST00000488427 PRSS54Q6PEW0 395 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 SGPP2Q8IWX5 399 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 TBC1D19Q8N5T2 526 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 C11orf72Q8NBR9 251 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 C19orf18Q8NEA5 215 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 OR2M3Q8NG83 312 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 OR4M1Q8NGD0 313 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 LYPD6BQ8NI32 183 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 NT5CQ8TCD5 201 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 DOK4Q8TEW6 326 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 CAPSLQ8WWF8 208 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 APH1AQ96BI3 265 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 LLPHQ9BRT6 129 aaKnown RBP2.06□□□□□ -2.08
ITGB1-214ENST00000488427 C20orf24Q9BUV8 137 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 IGHV2OR16-5A0A0B4J2B6 119 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 LOC285095A0A1B0GVY8 99 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 C17orf51A8MQB3 221 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 CCL22O00626 93 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 ERI3O43414 337 aaKnown RBP2.05□□□□□ -2.08
ITGB1-214ENST00000488427 ENSAO43768 121 aaKnown RBP2.05□□□□□ -2.08
ITGB1-214ENST00000488427 OXTP01178 125 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 IGLV6-57P01721 117 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 MT-ND4P03905 459 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 SLC6A1P30531 599 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 GALR1P47211 349 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 ERFP50548 548 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 INSL3P51460 131 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 ZNF121P58317 390 aaPredicted RBP2.05□□□□□ -2.08
ITGB1-214ENST00000488427 TAS2R46P59540 309 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 BTN1A1Q13410 526 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 DGCR6Q14129 220 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 NNATQ16517 81 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 PLPPR5Q32ZL2 321 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 ALKBH6Q3KRA9 238 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 TMEM155Q4W5P6 130 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 ZCWPW2Q504Y3 356 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 HIKESHIQ53FT3 197 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 SPIN3Q5JUX0 258 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 CCDC122Q5T0U0 273 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 MED27Q6P2C8 311 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 DGAT2L6Q6ZPD8 337 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 SLC22A9Q8IVM8 553 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 OR13C4Q8NGS5 318 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 PPWD1Q96BP3 646 aaKnown RBP2.05□□□□□ -2.08
ITGB1-214ENST00000488427 NRBF2Q96F24 287 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 MCEEQ96PE7 176 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 PEBP4Q96S96 227 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 TMEM185BQ9H7F4 350 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 ZNF586Q9NXT0 402 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 MED11Q9P086 117 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 MYEF2Q9P2K5 600 aaKnown RBP2.05□□□□□ -2.08
ITGB1-214ENST00000488427 ZNF391Q9UJN7 358 aa2.05□□□□□ -2.08
ITGB1-214ENST00000488427 LRP1Q07954 4544 aaKnown RBP2.05□□□□□ -2.08
ITGB1-214ENST00000488427 PKHD1L1Q86WI1 4243 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 IGHV3-15A0A0B4J1V0 119 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 XKRY2A2RUG3 117 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 CEACAM18A8MTB9 384 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 ZNF879B4DU55 563 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 C4orf51C9J302 202 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 H3BQV1 296 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 DNALI1O14645 258 aaPredicted RBP2.04□□□□□ -2.08
ITGB1-214ENST00000488427 AGTP01019 485 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 SMR3BP02814 79 aaPredicted RBP2.04□□□□□ -2.08
ITGB1-214ENST00000488427 CATP04040 527 aaKnown RBP2.04□□□□□ -2.08
ITGB1-214ENST00000488427 SPNP16150 400 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 ZNF140P52738 457 aaPredicted RBP2.04□□□□□ -2.08
ITGB1-214ENST00000488427 TCTAP57738 103 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 IRF8Q02556 426 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 STX5Q13190 355 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 NAB1Q13506 487 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 LGALS9BQ3B8N2 356 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 SP6Q3SY56 376 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 CARD17Q5XLA6 110 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 DCUN1D2Q6PH85 259 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 SPATA12Q7Z6I5 190 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 LYPD6Q86Y78 171 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 ST13P4Q8IZP2 240 aaPredicted RBP2.04□□□□□ -2.08
ITGB1-214ENST00000488427 BPIFCQ8NFQ6 507 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 ENKURQ8TC29 256 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 DEFB104AQ8WTQ1 72 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 MCUR1Q96AQ8 359 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 GPR21Q99679 349 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 CDCA4Q9BXL8 241 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 PCBD2Q9H0N5 130 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms