RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 ANAPC10Q9UM13 185 aa12.64□□□□□ -0.39
C9orf3-219ENST00000488186 ZNF736B4DX44 427 aaPredicted RBP12.63□□□□□ -0.39
C9orf3-219ENST00000488186 M0R1X1 148 aa12.63□□□□□ -0.39
C9orf3-219ENST00000488186 CTDSPLO15194 276 aa12.63□□□□□ -0.39
C9orf3-219ENST00000488186 HRH1P35367 487 aa12.63□□□□□ -0.39
C9orf3-219ENST00000488186 DGCR2P98153 550 aa12.63□□□□□ -0.39
C9orf3-219ENST00000488186 LYSMD2Q8IV50 215 aa12.63□□□□□ -0.39
C9orf3-219ENST00000488186 OR6F1Q8NGZ6 308 aa12.63□□□□□ -0.39
C9orf3-219ENST00000488186 OR2T10Q8NGZ9 312 aa12.63□□□□□ -0.39
C9orf3-219ENST00000488186 GIMAP1Q8WWP7 306 aa12.63□□□□□ -0.39
C9orf3-219ENST00000488186 C19orf24Q9BVV8 132 aa12.63□□□□□ -0.39
C9orf3-219ENST00000488186 MRPL20Q9BYC9 149 aaKnown RBP12.63□□□□□ -0.39
C9orf3-219ENST00000488186 FAM90A9PA6NNJ1 464 aa12.62□□□□□ -0.39
C9orf3-219ENST00000488186 H7C2Y5 167 aa12.62□□□□□ -0.39
C9orf3-219ENST00000488186 AADACP22760 399 aa12.62□□□□□ -0.39
C9orf3-219ENST00000488186 MC5RP33032 325 aa12.62□□□□□ -0.39
C9orf3-219ENST00000488186 TAS2R19P59542 299 aa12.62□□□□□ -0.39
C9orf3-219ENST00000488186 FXYD4P59646 89 aa12.62□□□□□ -0.39
C9orf3-219ENST00000488186 SSBP1Q04837 148 aaKnown RBP12.62□□□□□ -0.39
C9orf3-219ENST00000488186 DYRK1AQ13627 763 aa12.62□□□□□ -0.39
C9orf3-219ENST00000488186 ARSJQ5FYB0 599 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-219ENST00000488186 CCBE1Q6UXH8 406 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-219ENST00000488186 OVCH2Q7RTZ1 564 aa12.62□□□□□ -0.39
C9orf3-219ENST00000488186 C16orf82Q7Z2V1 217 aa12.62□□□□□ -0.39
C9orf3-219ENST00000488186 TMEM17Q86X19 198 aa12.62□□□□□ -0.39
C9orf3-219ENST00000488186 OR6Q1Q8NGQ2 317 aa12.62□□□□□ -0.39
C9orf3-219ENST00000488186 SMIM4Q8WVI0 70 aa12.62□□□□□ -0.39
C9orf3-219ENST00000488186 SECTM1Q8WVN6 248 aa12.62□□□□□ -0.39
C9orf3-219ENST00000488186 CFHR4Q92496 578 aa12.62□□□□□ -0.39
C9orf3-219ENST00000488186 NABP2Q9BQ15 211 aa12.62□□□□□ -0.39
C9orf3-219ENST00000488186 ZNF2Q9BSG1 426 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-219ENST00000488186 SLC25A33Q9BSK2 321 aa12.62□□□□□ -0.39
C9orf3-219ENST00000488186 NPFFR1Q9GZQ6 430 aa12.62□□□□□ -0.39
C9orf3-219ENST00000488186 GAB2Q9UQC2 676 aa12.62□□□□□ -0.39
C9orf3-219ENST00000488186 NCBP2LA6PVI3 153 aaKnown RBP12.61□□□□□ -0.39
C9orf3-219ENST00000488186 TUSC2O75896 110 aa12.61□□□□□ -0.39
C9orf3-219ENST00000488186 MOSP00540 346 aa12.61□□□□□ -0.39
C9orf3-219ENST00000488186 PPYP01298 95 aa12.61□□□□□ -0.39
C9orf3-219ENST00000488186 APOA2P02652 100 aa12.61□□□□□ -0.39
C9orf3-219ENST00000488186 CSF1P09603 554 aa12.61□□□□□ -0.39
C9orf3-219ENST00000488186 CT45A6P0DMU7 189 aa12.61□□□□□ -0.39
C9orf3-219ENST00000488186 CT45A5P0DMU8 189 aa12.61□□□□□ -0.39
C9orf3-219ENST00000488186 CT45A7P0DMV0 189 aa12.61□□□□□ -0.39
C9orf3-219ENST00000488186 PTBP1P26599 531 aaKnown RBP eCLIP12.61□□□□□ -0.39
C9orf3-219ENST00000488186 COMPP49747 757 aaPredicted RBP12.61□□□□□ -0.39
C9orf3-219ENST00000488186 CBX3Q13185 183 aa12.61□□□□□ -0.39
C9orf3-219ENST00000488186 LSAMPQ13449 338 aa12.61□□□□□ -0.39
C9orf3-219ENST00000488186 CNPY1Q3B7I2 92 aa12.61□□□□□ -0.39
C9orf3-219ENST00000488186 RNASE10Q5GAN6 216 aaKnown RBP12.61□□□□□ -0.39
C9orf3-219ENST00000488186 ZNF645Q8N7E2 425 aa12.61□□□□□ -0.39
C9orf3-219ENST00000488186 TMEM229BQ8NBD8 167 aa12.61□□□□□ -0.39
C9orf3-219ENST00000488186 DRAXINQ8NBI3 349 aaPredicted RBP12.61□□□□□ -0.39
C9orf3-219ENST00000488186 OR4C13Q8NGP0 309 aa12.61□□□□□ -0.39
C9orf3-219ENST00000488186 RBM14Q96PK6 669 aaKnown RBP12.61□□□□□ -0.39
C9orf3-219ENST00000488186 ZNF251Q9BRH9 671 aa12.61□□□□□ -0.39
C9orf3-219ENST00000488186 SLC5A7Q9GZV3 580 aa12.61□□□□□ -0.39
C9orf3-219ENST00000488186 SDHAF2Q9NX18 166 aa12.61□□□□□ -0.39
C9orf3-219ENST00000488186 TAS2R8Q9NYW2 309 aa12.61□□□□□ -0.39
C9orf3-219ENST00000488186 C1RLQ9NZP8 487 aa12.61□□□□□ -0.39
C9orf3-219ENST00000488186 TMEM89A2RUT3 159 aa12.6□□□□□ -0.39
C9orf3-219ENST00000488186 M0QYG6 137 aa12.6□□□□□ -0.39
C9orf3-219ENST00000488186 M0QZK8 103 aa12.6□□□□□ -0.39
C9orf3-219ENST00000488186 GSTZ1O43708 216 aaPredicted RBP12.6□□□□□ -0.39
C9orf3-219ENST00000488186 OR2F2O95006 317 aa12.6□□□□□ -0.39
C9orf3-219ENST00000488186 HKR1P10072 659 aa12.6□□□□□ -0.39
C9orf3-219ENST00000488186 TBPP20226 339 aa12.6□□□□□ -0.39
C9orf3-219ENST00000488186 RAG2P55895 527 aa12.6□□□□□ -0.39
C9orf3-219ENST00000488186 FOXL1Q12952 345 aa12.6□□□□□ -0.39
C9orf3-219ENST00000488186 HABP2Q14520 560 aaPredicted RBP12.6□□□□□ -0.39
C9orf3-219ENST00000488186 DHRS11Q6UWP2 260 aa12.6□□□□□ -0.39
C9orf3-219ENST00000488186 GLDNQ6ZMI3 551 aaPredicted RBP12.6□□□□□ -0.39
C9orf3-219ENST00000488186 CCDC190Q86UF4 302 aa12.6□□□□□ -0.39
C9orf3-219ENST00000488186 OR4F5Q8NH21 305 aa12.6□□□□□ -0.39
C9orf3-219ENST00000488186 BORCS5Q969J3 196 aa12.6□□□□□ -0.39
C9orf3-219ENST00000488186 ADTRPQ96IZ2 230 aa12.6□□□□□ -0.39
C9orf3-219ENST00000488186 EAF1Q96JC9 268 aaPredicted RBP12.6□□□□□ -0.39
C9orf3-219ENST00000488186 SOSTQ9BQB4 213 aa12.6□□□□□ -0.39
C9orf3-219ENST00000488186 IGKV1D-13A0A0B4J2D9 117 aa12.59□□□□□ -0.39
C9orf3-219ENST00000488186 OR5H14A6NHG9 310 aa12.59□□□□□ -0.39
C9orf3-219ENST00000488186 CHST1O43916 411 aa12.59□□□□□ -0.39
C9orf3-219ENST00000488186 RAB3DO95716 219 aa12.59□□□□□ -0.39
C9orf3-219ENST00000488186 CD3DP04234 171 aa12.59□□□□□ -0.39
C9orf3-219ENST00000488186 IGKV1-13P0DP09 117 aa12.59□□□□□ -0.39
C9orf3-219ENST00000488186 THBS3P49746 956 aa12.59□□□□□ -0.39
C9orf3-219ENST00000488186 TAGLNQ01995 201 aaKnown RBP12.59□□□□□ -0.39
C9orf3-219ENST00000488186 EBI3Q14213 229 aa12.59□□□□□ -0.39
C9orf3-219ENST00000488186 STEAP1BQ6NZ63 245 aa12.59□□□□□ -0.39
C9orf3-219ENST00000488186 Q8N402 240 aa12.59□□□□□ -0.39
C9orf3-219ENST00000488186 THAP7Q9BT49 309 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-219ENST00000488186 PRSS22Q9GZN4 317 aa12.59□□□□□ -0.39
C9orf3-219ENST00000488186 BEX1Q9HBH7 125 aa12.59□□□□□ -0.39
C9orf3-219ENST00000488186 ZNF107Q9UII5 783 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-219ENST00000488186 MOB4Q9Y3A3 225 aa12.59□□□□□ -0.39
C9orf3-219ENST00000488186 WASHC3Q9Y3C0 194 aa12.59□□□□□ -0.39
C9orf3-219ENST00000488186 INPP1P49441 399 aa12.58□□□□□ -0.4
C9orf3-219ENST00000488186 MEF2DQ14814 521 aa12.58□□□□□ -0.4
C9orf3-219ENST00000488186 C9orf152Q5JTZ5 239 aa12.58□□□□□ -0.4
C9orf3-219ENST00000488186 VAX1Q5SQQ9 334 aa12.58□□□□□ -0.4
C9orf3-219ENST00000488186 LPCAT3Q6P1A2 487 aa12.58□□□□□ -0.4
C9orf3-219ENST00000488186 ZBTB34Q8NCN2 500 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms