RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 RDH10Q8IZV5 341 aa3.05□□□□□ -1.92
SNRNP40-205ENST00000486941 Q8N6K4 173 aa3.05□□□□□ -1.92
SNRNP40-205ENST00000486941 Q8NFD4 153 aa3.05□□□□□ -1.92
SNRNP40-205ENST00000486941 OR10H4Q8NGA5 316 aa3.05□□□□□ -1.92
SNRNP40-205ENST00000486941 OR2G2Q8NGZ5 317 aa3.05□□□□□ -1.92
SNRNP40-205ENST00000486941 MUC7Q8TAX7 377 aa3.05□□□□□ -1.92
SNRNP40-205ENST00000486941 MBOAT4Q96T53 435 aa3.05□□□□□ -1.92
SNRNP40-205ENST00000486941 TBX5Q99593 518 aa3.05□□□□□ -1.92
SNRNP40-205ENST00000486941 CHCHD6Q9BRQ6 235 aa3.05□□□□□ -1.92
SNRNP40-205ENST00000486941 CABLES2Q9BTV7 478 aa3.05□□□□□ -1.92
SNRNP40-205ENST00000486941 THTPAQ9BU02 230 aa3.05□□□□□ -1.92
SNRNP40-205ENST00000486941 OSBPL10Q9BXB5 764 aa3.05□□□□□ -1.92
SNRNP40-205ENST00000486941 ABCG5Q9H222 651 aa3.05□□□□□ -1.92
SNRNP40-205ENST00000486941 PPIL3Q9H2H8 161 aaKnown RBP3.05□□□□□ -1.92
SNRNP40-205ENST00000486941 PLSCR3Q9NRY6 295 aa3.05□□□□□ -1.92
SNRNP40-205ENST00000486941 CALYQ9NYX4 217 aa3.05□□□□□ -1.92
SNRNP40-205ENST00000486941 IDI2-AS1Q9NZ38 188 aa3.05□□□□□ -1.92
SNRNP40-205ENST00000486941 ENOPH1Q9UHY7 261 aa3.05□□□□□ -1.92
SNRNP40-205ENST00000486941 LINC00527Q9UJ94 153 aa3.05□□□□□ -1.92
SNRNP40-205ENST00000486941 GNG8Q9UK08 70 aa3.05□□□□□ -1.92
SNRNP40-205ENST00000486941 MRPS28Q9Y2Q9 187 aaKnown RBP3.05□□□□□ -1.92
SNRNP40-205ENST00000486941 MEIKINA0A087WXM9 373 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 TRAV24A0A0B4J272 114 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 IGHV1-3A0A0C4DH29 117 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 NDUFAF8A1L188 74 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 OR4C45A6NMZ5 311 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 NCBP2LA6PVI3 153 aaKnown RBP3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 FAM90A26D6RGX4 464 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 G3V2T6 193 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 H0YJX3 145 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 HSD17B6O14756 317 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 SPINT2O43291 252 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 IGHG4P01861 327 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 IGF1P05019 195 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 HTR1AP08908 422 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 GATA2P23769 480 aaPredicted RBP3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 CD1BP29016 333 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 GLP1RP43220 463 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 GABPB1Q06547 395 aaPredicted RBP3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 FLOT2Q14254 428 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 ATXN7L3Q14CW9 347 aaPredicted RBP3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 KISS1Q15726 138 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 DEFB136Q30KP8 78 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 KRTAP13-3Q3SY46 172 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 Q3ZCU0 254 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 TP53I3Q53FA7 332 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 PAN3Q58A45 887 aaKnown RBP3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 SLC25A30Q5SVS4 291 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 RSBN1Q5VWQ0 802 aaPredicted RBP3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 ASCL4Q6XD76 172 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 MOB3BQ86TA1 216 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 ZNF429Q86V71 674 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 SERPINA12Q8IW75 414 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 LINC00311Q8N616 119 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 C8orf31Q8N9H6 132 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 Q8N9W7 124 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 PXT1Q8NFP0 134 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 OR11H1Q8NG94 326 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 OR8H1Q8NGG4 311 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 OR52M1Q8NGK5 317 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 OR5D18Q8NGL1 313 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 OR5D14Q8NGL3 314 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 OR8J1Q8NGP2 316 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 OR13C9Q8NGT0 318 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 OR10X1Q8NGY0 326 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 OR2T10Q8NGZ9 312 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 RFESDQ8TAC1 157 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 CNIH3Q8TBE1 160 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 MYOZ3Q8TDC0 251 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 C4orf3Q8WVX3 66 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 TRUB1Q8WWH5 349 aaKnown RBP3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 LEAP2Q969E1 77 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 ST6GALNAC6Q969X2 333 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 RFT1Q96AA3 541 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 SPACA5Q96QH8 159 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 S1PR3Q99500 378 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 RASL11BQ9BPW5 248 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 GABARAPL1Q9H0R8 117 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 CHCHD3Q9NX63 227 aaKnown RBP3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 KIF25Q9UIL4 384 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 POMPQ9Y244 141 aa3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 ZNF256Q9Y2P7 627 aaPredicted RBP3.04□□□□□ -1.92
SNRNP40-205ENST00000486941 DYNC2H1Q8NCM8 4307 aaKnown RBP3.03□□□□□ -1.92
SNRNP40-205ENST00000486941 A0A0J9YWU9 116 aa3.03□□□□□ -1.92
SNRNP40-205ENST00000486941 LCE6AA0A183 80 aa3.03□□□□□ -1.92
SNRNP40-205ENST00000486941 A0A1W2PPE3 182 aa3.03□□□□□ -1.92
SNRNP40-205ENST00000486941 DAPL1A0PJW8 107 aa3.03□□□□□ -1.92
SNRNP40-205ENST00000486941 H7C423 109 aa3.03□□□□□ -1.92
SNRNP40-205ENST00000486941 I3L521 148 aa3.03□□□□□ -1.92
SNRNP40-205ENST00000486941 J3QRE1 110 aa3.03□□□□□ -1.92
SNRNP40-205ENST00000486941 GYG2O15488 501 aa3.03□□□□□ -1.92
SNRNP40-205ENST00000486941 TXNL1O43396 289 aa3.03□□□□□ -1.92
SNRNP40-205ENST00000486941 SULT1B1O43704 296 aa3.03□□□□□ -1.92
SNRNP40-205ENST00000486941 ORC5O43913 435 aa3.03□□□□□ -1.92
SNRNP40-205ENST00000486941 MOSP00540 346 aa3.03□□□□□ -1.92
SNRNP40-205ENST00000486941 IGHV3-7P01780 117 aa3.03□□□□□ -1.92
SNRNP40-205ENST00000486941 HCKP08631 526 aa3.03□□□□□ -1.92
SNRNP40-205ENST00000486941 OR8U8P0C7N1 319 aa3.03□□□□□ -1.92
SNRNP40-205ENST00000486941 OR5H8P0DN80 308 aa3.03□□□□□ -1.92
SNRNP40-205ENST00000486941 VDAC1P21796 283 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms