RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 OR3A1P47881 315 aa12.08□□□□□ -0.48
CHD3-211ENST00000481999 DYNLT3P51808 116 aa12.08□□□□□ -0.48
CHD3-211ENST00000481999 UCNP55089 124 aa12.08□□□□□ -0.48
CHD3-211ENST00000481999 LINC00205P59089 165 aa12.08□□□□□ -0.48
CHD3-211ENST00000481999 LTC4SQ16873 150 aa12.08□□□□□ -0.48
CHD3-211ENST00000481999 H1FOOQ8IZA3 346 aaPredicted RBP12.08□□□□□ -0.48
CHD3-211ENST00000481999 GCSAMQ8N6F7 178 aa12.08□□□□□ -0.48
CHD3-211ENST00000481999 CABLES2Q9BTV7 478 aa12.08□□□□□ -0.48
CHD3-211ENST00000481999 RNF150Q9ULK6 438 aa12.08□□□□□ -0.48
CHD3-211ENST00000481999 PPP1R3CQ9UQK1 317 aa12.08□□□□□ -0.48
CHD3-211ENST00000481999 EPG5Q9HCE0 2579 aa12.08□□□□□ -0.48
CHD3-211ENST00000481999 TRGV8A0A0C4DH27 118 aa12.08□□□□□ -0.48
CHD3-211ENST00000481999 A0A1B0GV50 99 aa12.08□□□□□ -0.48
CHD3-211ENST00000481999 DPRXA6NFQ7 191 aa12.08□□□□□ -0.48
CHD3-211ENST00000481999 PCP4L1A6NKN8 68 aa12.08□□□□□ -0.48
CHD3-211ENST00000481999 C16orf97H3BN30 126 aa12.08□□□□□ -0.48
CHD3-211ENST00000481999 CHST1O43916 411 aa12.08□□□□□ -0.48
CHD3-211ENST00000481999 CST7O76096 145 aa12.08□□□□□ -0.48
CHD3-211ENST00000481999 BSPH1Q075Z2 132 aa12.08□□□□□ -0.48
CHD3-211ENST00000481999 EIF2S3LQ2VIR3 472 aaKnown RBP12.08□□□□□ -0.48
CHD3-211ENST00000481999 FAM169BQ8N8A8 192 aa12.08□□□□□ -0.48
CHD3-211ENST00000481999 C12orf57Q99622 126 aa12.08□□□□□ -0.48
CHD3-211ENST00000481999 ZNF835Q9Y2P0 537 aa12.08□□□□□ -0.48
CHD3-211ENST00000481999 RNF115Q9Y4L5 304 aa12.08□□□□□ -0.48
CHD3-211ENST00000481999 IGKV1D-17A0A075B6S4 117 aa12.07□□□□□ -0.48
CHD3-211ENST00000481999 A0A1B0GU03 582 aa12.07□□□□□ -0.48
CHD3-211ENST00000481999 DEFB108AA8MXU0 73 aa12.07□□□□□ -0.48
CHD3-211ENST00000481999 C12orf77C9JDV5 145 aa12.07□□□□□ -0.48
CHD3-211ENST00000481999 SERPINE2P07093 398 aa12.07□□□□□ -0.48
CHD3-211ENST00000481999 SLC25A6P12236 298 aa12.07□□□□□ -0.48
CHD3-211ENST00000481999 SOHLH1Q5JUK2 328 aa12.07□□□□□ -0.48
CHD3-211ENST00000481999 MRGPRGQ86SM5 289 aa12.07□□□□□ -0.48
CHD3-211ENST00000481999 ODF3L1Q8IXM7 274 aa12.07□□□□□ -0.48
CHD3-211ENST00000481999 OR52L2PQ8NGH6 319 aa12.07□□□□□ -0.48
CHD3-211ENST00000481999 C20orf24Q9BUV8 137 aa12.07□□□□□ -0.48
CHD3-211ENST00000481999 UNKLQ9H9P5 680 aaKnown RBP12.07□□□□□ -0.48
CHD3-211ENST00000481999 RBFOX3A6NFN3 312 aa12.07□□□□□ -0.48
CHD3-211ENST00000481999 GPR37O15354 613 aa12.07□□□□□ -0.48
CHD3-211ENST00000481999 WNT2P09544 360 aa12.07□□□□□ -0.48
CHD3-211ENST00000481999 OR13C7P0DN81 318 aa12.07□□□□□ -0.48
CHD3-211ENST00000481999 PSG2P11465 335 aa12.07□□□□□ -0.48
CHD3-211ENST00000481999 GRNP28799 593 aaKnown RBP12.07□□□□□ -0.48
CHD3-211ENST00000481999 CEACAM6P40199 344 aa12.07□□□□□ -0.48
CHD3-211ENST00000481999 CDSNQ15517 529 aa12.07□□□□□ -0.48
CHD3-211ENST00000481999 UTF1Q5T230 341 aa12.07□□□□□ -0.48
CHD3-211ENST00000481999 ZNF561Q8N587 486 aa12.07□□□□□ -0.48
CHD3-211ENST00000481999 TMEM217Q8N7C4 229 aa12.07□□□□□ -0.48
CHD3-211ENST00000481999 OR13A1Q8NGR1 328 aa12.07□□□□□ -0.48
CHD3-211ENST00000481999 NEUROG1Q92886 237 aa12.07□□□□□ -0.48
CHD3-211ENST00000481999 ATP5SQ99766 215 aa12.07□□□□□ -0.48
CHD3-211ENST00000481999 KIAA1456Q9P272 454 aa12.07□□□□□ -0.48
CHD3-211ENST00000481999 HIVEP3Q5T1R4 2406 aa12.07□□□□□ -0.48
CHD3-211ENST00000481999 CFAP46Q8IYW2 2715 aa12.06□□□□□ -0.48
CHD3-211ENST00000481999 A0A0G2JRQ6 117 aa12.06□□□□□ -0.48
CHD3-211ENST00000481999 NPIPB11E5RHQ5 1161 aa12.06□□□□□ -0.48
CHD3-211ENST00000481999 CCL8P80075 99 aa12.06□□□□□ -0.48
CHD3-211ENST00000481999 SPSB3Q6PJ21 355 aa12.06□□□□□ -0.48
CHD3-211ENST00000481999 MOB1BQ7L9L4 216 aa12.06□□□□□ -0.48
CHD3-211ENST00000481999 STX12Q86Y82 276 aa12.06□□□□□ -0.48
CHD3-211ENST00000481999 FGFRL1Q8N441 504 aa12.06□□□□□ -0.48
CHD3-211ENST00000481999 DEFB108BQ8NET1 73 aa12.06□□□□□ -0.48
CHD3-211ENST00000481999 MEGF10Q96KG7 1140 aa12.06□□□□□ -0.48
CHD3-211ENST00000481999 MBNL3Q9NUK0 354 aaKnown RBP12.06□□□□□ -0.48
CHD3-211ENST00000481999 KCNS2Q9ULS6 477 aa12.06□□□□□ -0.48
CHD3-211ENST00000481999 RBM7Q9Y580 266 aaKnown RBP12.06□□□□□ -0.48
CHD3-211ENST00000481999 SPTAN1Q13813 2472 aaKnown RBP12.06□□□□□ -0.48
CHD3-211ENST00000481999 ZNF16P17020 682 aaPredicted RBP12.06□□□□□ -0.48
CHD3-211ENST00000481999 AGAP20933 346 aa12.06□□□□□ -0.48
CHD3-211ENST00000481999 MDH2P40926 338 aaKnown RBP12.06□□□□□ -0.48
CHD3-211ENST00000481999 SULT1A1P50225 295 aa12.06□□□□□ -0.48
CHD3-211ENST00000481999 PAX9P55771 341 aa12.06□□□□□ -0.48
CHD3-211ENST00000481999 RPL23AP62750 156 aaKnown RBP12.06□□□□□ -0.48
CHD3-211ENST00000481999 CCL20P78556 96 aa12.06□□□□□ -0.48
CHD3-211ENST00000481999 OR10V1Q8NGI7 309 aa12.06□□□□□ -0.48
CHD3-211ENST00000481999 ISOC2Q96AB3 205 aa12.06□□□□□ -0.48
CHD3-211ENST00000481999 ABHD14AQ9BUJ0 271 aa12.06□□□□□ -0.48
CHD3-211ENST00000481999 RALYQ9UKM9 306 aaKnown RBP12.06□□□□□ -0.48
CHD3-211ENST00000481999 RFNGQ9Y644 331 aa12.06□□□□□ -0.48
CHD3-211ENST00000481999 IGLV3-9A0A075B6K5 115 aa12.05□□□□□ -0.48
CHD3-211ENST00000481999 DFFBO76075 338 aa12.05□□□□□ -0.48
CHD3-211ENST00000481999 CYB5R3P00387 301 aaPredicted RBP12.05□□□□□ -0.48
CHD3-211ENST00000481999 DAOP14920 347 aa12.05□□□□□ -0.48
CHD3-211ENST00000481999 KRBOX4Q5JUW0 171 aa12.05□□□□□ -0.48
CHD3-211ENST00000481999 AKR1C8PQ5T2L2 129 aa12.05□□□□□ -0.48
CHD3-211ENST00000481999 DPPA3Q6W0C5 159 aa12.05□□□□□ -0.48
CHD3-211ENST00000481999 GPR146Q96CH1 333 aa12.05□□□□□ -0.48
CHD3-211ENST00000481999 WFIKKN1Q96NZ8 548 aa12.05□□□□□ -0.48
CHD3-211ENST00000481999 RAB40CQ96S21 281 aa12.05□□□□□ -0.48
CHD3-211ENST00000481999 RARRES2Q99969 163 aa12.05□□□□□ -0.48
CHD3-211ENST00000481999 HIPK2Q9H2X6 1198 aa12.05□□□□□ -0.48
CHD3-211ENST00000481999 DYSFO75923 2080 aa12.05□□□□□ -0.48
CHD3-211ENST00000481999 A0A1W2PPH5 198 aa12.05□□□□□ -0.48
CHD3-211ENST00000481999 IGHV1-46P01743 117 aa12.05□□□□□ -0.48
CHD3-211ENST00000481999 S100A6P06703 90 aa12.05□□□□□ -0.48
CHD3-211ENST00000481999 RAB5AP20339 215 aa12.05□□□□□ -0.48
CHD3-211ENST00000481999 EPHA1P21709 976 aa12.05□□□□□ -0.48
CHD3-211ENST00000481999 PRDX2P32119 198 aa12.05□□□□□ -0.48
CHD3-211ENST00000481999 MEOX2P50222 304 aa12.05□□□□□ -0.48
CHD3-211ENST00000481999 SMIM21Q3B7S5 101 aa12.05□□□□□ -0.48
CHD3-211ENST00000481999 OR2B11Q5JQS5 317 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms