RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 ZNF485Q8NCK3 441 aa10.06□□□□□ -0.8
TRIM27-205ENST00000481474 FOXJ3Q9UPW0 622 aa10.06□□□□□ -0.8
TRIM27-205ENST00000481474 LINC00862A6NCI5 91 aa10.05□□□□□ -0.8
TRIM27-205ENST00000481474 FOXH1O75593 365 aa10.05□□□□□ -0.8
TRIM27-205ENST00000481474 SAXO2Q658L1 398 aa10.05□□□□□ -0.8
TRIM27-205ENST00000481474 OR13A1Q8NGR1 328 aa10.05□□□□□ -0.8
TRIM27-205ENST00000481474 WDFY2Q96P53 400 aa10.05□□□□□ -0.8
TRIM27-205ENST00000481474 RASL10BQ96S79 203 aa10.05□□□□□ -0.8
TRIM27-205ENST00000481474 TMEM70Q9BUB7 260 aa10.05□□□□□ -0.8
TRIM27-205ENST00000481474 CACNA1EQ15878 2313 aa10.05□□□□□ -0.8
TRIM27-205ENST00000481474 APOMO95445 188 aa10.05□□□□□ -0.8
TRIM27-205ENST00000481474 MVB12AQ96EY5 273 aa10.05□□□□□ -0.8
TRIM27-205ENST00000481474 SSBP3Q9BWW4 388 aaPredicted RBP10.05□□□□□ -0.8
TRIM27-205ENST00000481474 S1PR2O95136 353 aa10.05□□□□□ -0.8
TRIM27-205ENST00000481474 PRR35P0CG20 571 aa10.05□□□□□ -0.8
TRIM27-205ENST00000481474 HBBP68871 147 aa10.05□□□□□ -0.8
TRIM27-205ENST00000481474 RTN4RL2Q86UN3 420 aa10.05□□□□□ -0.8
TRIM27-205ENST00000481474 NUDT16L1Q9BRJ7 211 aaKnown RBP10.05□□□□□ -0.8
TRIM27-205ENST00000481474 QTRT1Q9BXR0 403 aaKnown RBP10.05□□□□□ -0.8
TRIM27-205ENST00000481474 PLCE1Q9P212 2302 aa10.05□□□□□ -0.8
TRIM27-205ENST00000481474 TRBV20OR9-2A0A075B6H5 130 aa10.05□□□□□ -0.8
TRIM27-205ENST00000481474 OR8B12Q8NGG6 310 aa10.05□□□□□ -0.8
TRIM27-205ENST00000481474 DLX4Q92988 240 aaPredicted RBP10.05□□□□□ -0.8
TRIM27-205ENST00000481474 PSMG3Q9BT73 122 aaPredicted RBP10.05□□□□□ -0.8
TRIM27-205ENST00000481474 RBFOX1Q9NWB1 397 aaKnown RBP10.05□□□□□ -0.8
TRIM27-205ENST00000481474 IGKV1D-33P01593 117 aa10.05□□□□□ -0.8
TRIM27-205ENST00000481474 IGKV1-33P01594 117 aa10.05□□□□□ -0.8
TRIM27-205ENST00000481474 FAM219BQ5XKK7 198 aa10.05□□□□□ -0.8
TRIM27-205ENST00000481474 CLRN3Q8NCR9 226 aa10.05□□□□□ -0.8
TRIM27-205ENST00000481474 CACFD1Q9UGQ2 172 aa10.05□□□□□ -0.8
TRIM27-205ENST00000481474 TRDCB7Z8K6 153 aa10.05□□□□□ -0.8
TRIM27-205ENST00000481474 CD7P09564 240 aa10.05□□□□□ -0.8
TRIM27-205ENST00000481474 SLC25A28Q96A46 364 aa10.05□□□□□ -0.8
TRIM27-205ENST00000481474 PSORS1C1Q9UIG5 152 aa10.05□□□□□ -0.8
TRIM27-205ENST00000481474 CEP290O15078 2479 aa10.04□□□□□ -0.8
TRIM27-205ENST00000481474 JPT2Q9H910 190 aa10.04□□□□□ -0.8
TRIM27-205ENST00000481474 OPN4Q9UHM6 478 aa10.04□□□□□ -0.8
TRIM27-205ENST00000481474 SIRT4Q9Y6E7 314 aaPredicted RBP10.04□□□□□ -0.8
TRIM27-205ENST00000481474 ABCC6O95255 1503 aa10.04□□□□□ -0.8
TRIM27-205ENST00000481474 MOSP00540 346 aa10.04□□□□□ -0.8
TRIM27-205ENST00000481474 PGFP49763 221 aa10.04□□□□□ -0.8
TRIM27-205ENST00000481474 OR4D5Q8NGN0 318 aa10.04□□□□□ -0.8
TRIM27-205ENST00000481474 SEMA5BQ9P283 1151 aa10.04□□□□□ -0.8
TRIM27-205ENST00000481474 HS3ST3B1Q9Y662 390 aa10.04□□□□□ -0.8
TRIM27-205ENST00000481474 LIPFP07098 398 aa10.04□□□□□ -0.8
TRIM27-205ENST00000481474 GPX2P18283 190 aa10.04□□□□□ -0.8
TRIM27-205ENST00000481474 KIAA2026Q5HYC2 2103 aa10.04□□□□□ -0.8
TRIM27-205ENST00000481474 F8WEM9 126 aa10.04□□□□□ -0.8
TRIM27-205ENST00000481474 GALNT14Q96FL9 552 aa10.04□□□□□ -0.8
TRIM27-205ENST00000481474 SCMH1Q96GD3 660 aa10.04□□□□□ -0.8
TRIM27-205ENST00000481474 SIGLEC5O15389 551 aa10.04□□□□□ -0.8
TRIM27-205ENST00000481474 ATP5LO75964 103 aa10.04□□□□□ -0.8
TRIM27-205ENST00000481474 CFDP00746 253 aaPredicted RBP10.04□□□□□ -0.8
TRIM27-205ENST00000481474 MUC1P15941 1255 aaPredicted RBP10.04□□□□□ -0.8
TRIM27-205ENST00000481474 WDR88Q6ZMY6 472 aa10.04□□□□□ -0.8
TRIM27-205ENST00000481474 CMC2Q9NRP2 79 aa10.04□□□□□ -0.8
TRIM27-205ENST00000481474 SNED1Q8TER0 1413 aa10.04□□□□□ -0.8
TRIM27-205ENST00000481474 CHD3Q12873 2000 aaKnown RBP10.04□□□□□ -0.8
TRIM27-205ENST00000481474 WDR38Q5JTN6 314 aa10.03□□□□□ -0.8
TRIM27-205ENST00000481474 FAM201AQ5SY85 155 aa10.03□□□□□ -0.8
TRIM27-205ENST00000481474 AFMIDQ63HM1 303 aa10.03□□□□□ -0.8
TRIM27-205ENST00000481474 LYNX1G3V0Z9 82 aa10.03□□□□□ -0.8
TRIM27-205ENST00000481474 LYNX1P0DP58 116 aa10.03□□□□□ -0.8
TRIM27-205ENST00000481474 SELENOHQ8IZQ5 122 aaKnown RBP10.03□□□□□ -0.8
TRIM27-205ENST00000481474 ZNF107Q9UII5 783 aaPredicted RBP10.03□□□□□ -0.8
TRIM27-205ENST00000481474 TRIP12Q14669 1992 aaPredicted RBP10.03□□□□□ -0.8
TRIM27-205ENST00000481474 DUXBA0A1W2PPF3 345 aa10.03□□□□□ -0.8
TRIM27-205ENST00000481474 ANKRD20A5PA0PJZ0 165 aa10.03□□□□□ -0.8
TRIM27-205ENST00000481474 ZNF585BQ52M93 769 aa10.03□□□□□ -0.8
TRIM27-205ENST00000481474 SPATA45Q537H7 98 aa10.03□□□□□ -0.8
TRIM27-205ENST00000481474 OR2Y1Q8NGV0 311 aa10.03□□□□□ -0.8
TRIM27-205ENST00000481474 PP6455Q8WZ26 134 aa10.03□□□□□ -0.8
TRIM27-205ENST00000481474 LAMTOR3Q9UHA4 124 aa10.03□□□□□ -0.8
TRIM27-205ENST00000481474 PRNDQ9UKY0 176 aa10.03□□□□□ -0.8
TRIM27-205ENST00000481474 SCN9AQ15858 1988 aa10.03□□□□□ -0.8
TRIM27-205ENST00000481474 LINC00869P0C866 280 aa10.03□□□□□ -0.8
TRIM27-205ENST00000481474 HIST1H4AP62805 103 aaKnown RBP10.03□□□□□ -0.8
TRIM27-205ENST00000481474 FAM27E3Q08E93 113 aa10.03□□□□□ -0.8
TRIM27-205ENST00000481474 ACER3Q9NUN7 267 aa10.03□□□□□ -0.8
TRIM27-205ENST00000481474 PEMTQ9UBM1 199 aa10.03□□□□□ -0.8
TRIM27-205ENST00000481474 IQGAP1P46940 1657 aa10.03□□□□□ -0.8
TRIM27-205ENST00000481474 ADARB2-AS1A8MUL3 147 aa10.03□□□□□ -0.8
TRIM27-205ENST00000481474 PNRC1Q12796 327 aaPredicted RBP10.03□□□□□ -0.8
TRIM27-205ENST00000481474 TEPPQ6URK8 271 aa10.03□□□□□ -0.8
TRIM27-205ENST00000481474 FAM60AQ9NP50 221 aa10.03□□□□□ -0.8
TRIM27-205ENST00000481474 CALYQ9NYX4 217 aa10.03□□□□□ -0.8
TRIM27-205ENST00000481474 COL6A6A6NMZ7 2263 aa10.03□□□□□ -0.8
TRIM27-205ENST00000481474 SP9P0CG40 484 aa10.03□□□□□ -0.8
TRIM27-205ENST00000481474 SLC35E3Q7Z769 313 aa10.03□□□□□ -0.8
TRIM27-205ENST00000481474 A0A0U1RQV5 110 aa10.02□□□□□ -0.8
TRIM27-205ENST00000481474 DEFB130BP0DP73 79 aa10.02□□□□□ -0.8
TRIM27-205ENST00000481474 DEFB130AP0DP74 79 aa10.02□□□□□ -0.8
TRIM27-205ENST00000481474 HMGA1P17096 107 aaKnown RBP10.02□□□□□ -0.8
TRIM27-205ENST00000481474 FABP5Q01469 135 aa10.02□□□□□ -0.8
TRIM27-205ENST00000481474 SRSF4Q08170 494 aaKnown RBP10.02□□□□□ -0.8
TRIM27-205ENST00000481474 ISXQ2M1V0 245 aa10.02□□□□□ -0.8
TRIM27-205ENST00000481474 TMEM249Q2WGJ8 235 aa10.02□□□□□ -0.8
TRIM27-205ENST00000481474 DLEU7Q6UYE1 221 aa10.02□□□□□ -0.8
TRIM27-205ENST00000481474 Q6ZSR9 355 aa10.02□□□□□ -0.8
TRIM27-205ENST00000481474 TMEM219Q86XT9 240 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms