RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 KLF9Q13886 244 aaPredicted RBP5.13□□□□□ -1.59
SF3B1-209ENST00000479532 RHEBQ15382 184 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 RAB11BQ15907 218 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 SLC22A6Q4U2R8 563 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 LRRC10Q5BKY1 277 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 FAM74A1Q5RGS3 127 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 FAM201AQ5SY85 155 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 ASPHD2Q6ICH7 369 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 GLIPR1L1Q6UWM5 242 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 ALKAL2Q6UX46 152 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 RBMS3Q6XE24 437 aaKnown RBP5.13□□□□□ -1.59
SF3B1-209ENST00000479532 LINC00596Q86U02 117 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 LRRTM1Q86UE6 522 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 BATF2Q8N1L9 274 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 OSR2Q8N2R0 312 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 KCNRGQ8N5I3 272 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 OR10J5Q8NHC4 309 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 CLDND2Q8NHS1 167 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 RNASEH2CQ8TDP1 164 aaKnown RBP5.13□□□□□ -1.59
SF3B1-209ENST00000479532 SMIM4Q8WVI0 70 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 C18orf12Q96KH6 178 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 ZNF488Q96MN9 340 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 NRIP2Q9BQI9 281 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 ARL6Q9H0F7 186 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 C20orf85Q9H1P6 137 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 SMDT1Q9H4I9 107 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 PATZ1Q9HBE1 687 aaKnown RBP5.13□□□□□ -1.59
SF3B1-209ENST00000479532 HES4Q9HCC6 221 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 AURKAIP1Q9NWT8 199 aaPredicted RBP5.13□□□□□ -1.59
SF3B1-209ENST00000479532 IL36GQ9NZH8 169 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 MTCH1Q9NZJ7 389 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 ABRACLQ9P1F3 81 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 CLN8Q9UBY8 286 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 OR14J1Q9UGF5 321 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 OR5V1Q9UGF6 321 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 STEAP1Q9UHE8 339 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 AK6Q9Y3D8 172 aaKnown RBP5.13□□□□□ -1.59
SF3B1-209ENST00000479532 FBXO7Q9Y3I1 522 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 KPTNQ9Y664 436 aa5.13□□□□□ -1.59
SF3B1-209ENST00000479532 ABCA12Q86UK0 2595 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 PRRC2AP48634 2157 aaKnown RBP5.12□□□□□ -1.59
SF3B1-209ENST00000479532 SPG11Q96JI7 2443 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 A0A1W2PPH5 198 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 B4DSR2 109 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 GPR31O00270 319 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 MFNGO00587 321 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 SLC17A2O00624 439 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 DEGS1O15121 323 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 SIGLEC5O15389 551 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 DLEU1O43261 78 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 BCL2L11O43521 198 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 HAND1O96004 215 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 PSG2P11465 335 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 NDUFB7P17568 137 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 ADRA2CP18825 462 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 GABRR1P24046 479 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 ZFP36P26651 326 aaKnown RBP5.12□□□□□ -1.59
SF3B1-209ENST00000479532 PRDX2P32119 198 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 NPBWR2P48146 333 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 SNU13P55769 128 aaKnown RBP5.12□□□□□ -1.59
SF3B1-209ENST00000479532 ERVK11-1P61568 191 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 SSBP1Q04837 148 aaKnown RBP5.12□□□□□ -1.59
SF3B1-209ENST00000479532 MXD1Q05195 221 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 TNFRSF9Q07011 255 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 IL13RA2Q14627 380 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 MPV17LQ2QL34 196 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 TMEM249Q2WGJ8 235 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 C1orf100Q5SVJ3 147 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 STUMQ69YW2 141 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 CYB5R2Q6BCY4 276 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 BTNL3Q6UXE8 466 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 ASCL4Q6XD76 172 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 CHST4Q8NCG5 386 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 TMEM185AQ8NFB2 350 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 OR5D13Q8NGL4 314 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 TERB2Q8NHR7 220 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 KCNG3Q8TAE7 436 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 MRGPRDQ8TDS7 321 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 MAFIPQ8WZ33 124 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 HIST1H2BAQ96A08 127 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 SMIM8Q96KF7 97 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 CCL13Q99616 98 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 URM1Q9BTM9 101 aaKnown RBP5.12□□□□□ -1.59
SF3B1-209ENST00000479532 TMEM59Q9BXS4 323 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 FAM234AQ9H0X4 552 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 WDR13Q9H1Z4 485 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 SPACA1Q9HBV2 294 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 KAAG1Q9UBP8 84 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 ST3GAL6Q9Y274 331 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 CENPEQ02224 2701 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 NAV2Q8IVL1 2488 aa5.12□□□□□ -1.59
SF3B1-209ENST00000479532 IGKV1-12A0A0C4DH73 117 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 KANTRA0A1W2PQU2 76 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 FAM90A10PA6NDY2 464 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 FAM90A18PA6NE21 464 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 FAM90A16PA6NEW6 464 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 FAM90A20PA6NIJ5 464 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 FAM90A8PA6NJQ4 464 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 FAM90A7PA6NKC0 464 aa5.11□□□□□ -1.59
SF3B1-209ENST00000479532 IFITM5A6NNB3 132 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms