RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 RTTNQ86VV8 2226 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 DYSFO75923 2080 aa2.53□□□□□ -2.01
CDC42BPA-212ENST00000478573 DSCAML1Q8TD84 2053 aa2.53□□□□□ -2.01
CDC42BPA-212ENST00000478573 TEP1Q99973 2627 aaKnown RBP2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 TMED7-TICAM2A0A0A6YYA0 188 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 IGHV3-74A0A0B4J1X5 117 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 A0A1W2PP18 115 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 TCRBV3S1A0A5B6 114 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 TMEM72A0PK05 275 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 ISPDA4D126 451 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 PRORSD1PA6NEY8 169 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 EVPLLA8MZ36 301 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 H0YC42 278 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 SMKR1H3BMG3 65 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 VAMP5O95183 116 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 AHSA1O95433 338 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 IGF2P01344 180 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 TFPTP0C1Z6 253 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 UBTFL6P0CB48 400 aaPredicted RBP2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 OR5H8P0DN80 308 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 GPX2P18283 190 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 GSTM3P21266 225 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 S100A1P23297 94 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 IL32P24001 234 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 CARD18P57730 90 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 SLC35A1P78382 337 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 H3F3AP84243 136 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 KRR1Q13601 381 aaKnown RBP2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 FLOT2Q14254 428 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 RGNQ15493 299 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 TOMM34Q15785 309 aaPredicted RBP2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 STK11Q15831 433 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 DEFB113Q30KQ7 82 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 NDUFAF6Q330K2 333 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 KRTAP21-3Q3LHN1 58 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 TIMM23BQ5SRD1 257 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 HES5Q5TA89 166 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 STUMQ69YW2 141 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 Q6P435 159 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 LINC01551Q86U37 167 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 FUNDC1Q8IVP5 155 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 MICU2Q8IYU8 434 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 DEFB107AQ8IZN7 70 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 C15orf56Q8N910 161 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 OR52E4Q8NGH9 312 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 OR5M1Q8NGP8 315 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 OR9I1Q8NGQ6 314 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 OR52P1PQ8NH57 321 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 ZNF596Q8TC21 504 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 ABHD3Q8WU67 409 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 RASSF5Q8WWW0 418 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 S100ZQ8WXG8 99 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 RAB8BQ92930 207 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 NRBF2Q96F24 287 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 C9orf16Q9BUW7 83 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 LINC00470Q9BZP3 86 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 ACTR3CQ9C0K3 210 aaPredicted RBP2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 IFI27L2Q9H2X8 130 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 TPK1Q9H3S4 243 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 WDR55Q9H6Y2 383 aaPredicted RBP2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 PLEKHF2Q9H8W4 249 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 NOX3Q9HBY0 568 aa2.52□□□□□ -2.01
CDC42BPA-212ENST00000478573 CSMD1Q96PZ7 3565 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 IGLV1-36A0A0B4J1U3 117 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 A0A0B4J2E0 115 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 A0A1B0GX12 115 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 CIB4A0PJX0 185 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 C5orf58C9J3I9 102 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 INS-IGF2F8WCM5 200 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 K7EMT4 169 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 KPNA4O00629 521 aaPredicted RBP2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 CHP2O43745 196 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 OR2T1O43869 369 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 FABP3P05413 133 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 CXCR1P25024 350 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 CRATP43155 626 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 RANBP1P43487 201 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 RPS5P46782 204 aaKnown RBP2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 IDH2P48735 452 aaKnown RBP2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 RND2P52198 227 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 AQP4P55087 323 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 GABARAPL2P60520 117 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 COPZ1P61923 177 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 CDK6Q00534 326 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 MADCAM1Q13477 382 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 TMEM176BQ3YBM2 270 aaPredicted RBP2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 RBM48Q5RL73 367 aaKnown RBP2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 NCMAPQ5T1S8 102 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 FBXW9Q5XUX1 488 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 LCN8Q6JVE9 175 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 ERICH5Q6P6B1 374 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 CASP12Q6UXS9 341 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 BHLHA15Q7RTS1 189 aaPredicted RBP2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 MSRB3Q8IXL7 192 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 ENTHD1Q8IYW4 607 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 JAGN1Q8N5M9 183 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 C8orf31Q8N9H6 132 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 OR8J3Q8NGG0 315 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 MFSD8Q8NHS3 518 aa2.51□□□□□ -2.01
CDC42BPA-212ENST00000478573 LINC01560Q8TB33 94 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms