RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 LYZL4Q96KX0 146 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 UQCC2Q9BRT2 126 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 URM1Q9BTM9 101 aaKnown RBP3.5□□□□□ -1.85
VPS13D-206ENST00000476045 RNF126Q9BV68 326 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 TMEM59Q9BXS4 323 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 PECRQ9BY49 303 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 OR51B6Q9H340 312 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 TMEM231Q9H6L2 316 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 METTL8Q9H825 291 aaKnown RBP3.5□□□□□ -1.85
VPS13D-206ENST00000476045 MOB1AQ9H8S9 216 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 PATZ1Q9HBE1 687 aaKnown RBP3.5□□□□□ -1.85
VPS13D-206ENST00000476045 LPAR2Q9HBW0 351 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 SEPSECSQ9HD40 501 aaKnown RBP3.5□□□□□ -1.85
VPS13D-206ENST00000476045 CHMP1AQ9HD42 196 aaPredicted RBP3.5□□□□□ -1.85
VPS13D-206ENST00000476045 TREM1Q9NP99 234 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 PNRC2Q9NPJ4 139 aaKnown RBP3.5□□□□□ -1.85
VPS13D-206ENST00000476045 OR2S2Q9NQN1 319 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 GPR173Q9NS66 373 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 TMEM106BQ9NUM4 274 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 SLC2A8Q9NY64 477 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 EHFQ9NZC4 300 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 OR5AC2Q9NZP5 309 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 GSKIPQ9P0R6 139 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 GLS2Q9UI32 602 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 ANAPC10Q9UM13 185 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 GPR132Q9UNW8 380 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 PPP1R3CQ9UQK1 317 aa3.5□□□□□ -1.85
VPS13D-206ENST00000476045 LOC105371242A0A075B767 164 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 A0A087X0M5 115 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 A0A1B0GUS0 222 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 A0A1B0GWJ7 208 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 A0A1B0GX30 115 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 MSGN1A6NI15 193 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 CGB1A6NKQ9 187 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 IQCF6A8MYZ5 107 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 GPR31O00270 319 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 MFNGO00587 321 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 BET1O15155 118 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 SPRY1O43609 319 aaPredicted RBP3.49□□□□□ -1.85
VPS13D-206ENST00000476045 ENSAO43768 121 aaKnown RBP3.49□□□□□ -1.85
VPS13D-206ENST00000476045 VENTXO95231 258 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 TMEM225BP0DP42 221 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 TPT1P13693 172 aaKnown RBP3.49□□□□□ -1.85
VPS13D-206ENST00000476045 IRF2P14316 349 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 TBPP20226 339 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 CCL1P22362 96 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 GABRR1P24046 479 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 PTGFRP43088 359 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 CBX5P45973 191 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 SNU13P55769 128 aaKnown RBP3.49□□□□□ -1.85
VPS13D-206ENST00000476045 KRTAP10-11P60412 298 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 GRB2P62993 217 aaKnown RBP3.49□□□□□ -1.85
VPS13D-206ENST00000476045 PSG7Q13046 419 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 ZNF154Q13106 437 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 ZNF345Q14585 488 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 PNLIPRP3Q17RR3 467 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 ALKBH6Q3KRA9 238 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 ACTBL2Q562R1 376 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 PAN3Q58A45 887 aaKnown RBP3.49□□□□□ -1.85
VPS13D-206ENST00000476045 VAX1Q5SQQ9 334 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 AVPI1Q5T686 147 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 PRSS54Q6PEW0 395 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 DRAM2Q6UX65 266 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 BAP18Q8IXM2 172 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 TMEM86BQ8N661 226 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 PNLDC1Q8NA58 520 aaKnown RBP3.49□□□□□ -1.85
VPS13D-206ENST00000476045 OR2Z1Q8NG97 314 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 OR5AP2Q8NGF4 316 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 OR8B3Q8NGG8 313 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 OR11L1Q8NGX0 322 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 OR1F12Q8NHA8 337 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 TMED6Q8WW62 240 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 ITLN1Q8WWA0 313 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 CCL17Q92583 94 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 SPTSSAQ969W0 71 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 CPNE2Q96FN4 548 aaPredicted RBP3.49□□□□□ -1.85
VPS13D-206ENST00000476045 OR10C1Q96KK4 312 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 C2orf50Q96LR7 162 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 C1orf147Q96MC9 270 aaPredicted RBP3.49□□□□□ -1.85
VPS13D-206ENST00000476045 OR2V2Q96R30 315 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 OR8B2Q96RD0 313 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 S100A13Q99584 98 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 TSNAXQ99598 290 aaKnown RBP3.49□□□□□ -1.85
VPS13D-206ENST00000476045 RTBDNQ9BSG5 229 aaPredicted RBP3.49□□□□□ -1.85
VPS13D-206ENST00000476045 HDHD3Q9BSH5 251 aaPredicted RBP3.49□□□□□ -1.85
VPS13D-206ENST00000476045 ADAT1Q9BUB4 502 aaKnown RBP3.49□□□□□ -1.85
VPS13D-206ENST00000476045 NKX6-2Q9C056 277 aaPredicted RBP3.49□□□□□ -1.85
VPS13D-206ENST00000476045 KLK15Q9H2R5 256 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 SAV1Q9H4B6 383 aaPredicted RBP3.49□□□□□ -1.85
VPS13D-206ENST00000476045 C5orf66Q9H5L9 145 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 CYTL1Q9NRR1 136 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 MIOXQ9UGB7 285 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 PIGLQ9Y2B2 252 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 LSM5Q9Y4Y9 91 aaKnown RBP3.49□□□□□ -1.85
VPS13D-206ENST00000476045 INSIG2Q9Y5U4 225 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 NOTCH3Q9UM47 2321 aa3.49□□□□□ -1.85
VPS13D-206ENST00000476045 PRKDCP78527 4128 aaKnown RBP3.49□□□□□ -1.85
VPS13D-206ENST00000476045 DSCAML1Q8TD84 2053 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 IGKV1D-8A0A087WSZ0 117 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 IGHV2-70DA0A0C4DH43 119 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms