RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 TIPINQ9BVW5 301 aa2.15□□□□□ -2.07
GAPVD1-211ENST00000467707 UPF3BQ9BZI7 483 aaKnown RBP2.15□□□□□ -2.07
GAPVD1-211ENST00000467707 MS4A6AQ9H2W1 248 aa2.15□□□□□ -2.07
GAPVD1-211ENST00000467707 TMEM106BQ9NUM4 274 aa2.15□□□□□ -2.07
GAPVD1-211ENST00000467707 PLEKHJ1Q9NW61 149 aa2.15□□□□□ -2.07
GAPVD1-211ENST00000467707 NLRC5Q86WI3 1866 aa2.15□□□□□ -2.07
GAPVD1-211ENST00000467707 TINCRA0A1B0GVN0 87 aa2.14□□□□□ -2.07
GAPVD1-211ENST00000467707 TMEM235A6NFC5 223 aa2.14□□□□□ -2.07
GAPVD1-211ENST00000467707 BIRC5O15392 142 aa2.14□□□□□ -2.07
GAPVD1-211ENST00000467707 GSTZ1O43708 216 aaPredicted RBP2.14□□□□□ -2.07
GAPVD1-211ENST00000467707 SSNA1O43805 119 aa2.14□□□□□ -2.07
GAPVD1-211ENST00000467707 GZMBP10144 247 aa2.14□□□□□ -2.07
GAPVD1-211ENST00000467707 UGT2B7P16662 529 aa2.14□□□□□ -2.07
GAPVD1-211ENST00000467707 IFNGR2P38484 337 aa2.14□□□□□ -2.07
GAPVD1-211ENST00000467707 HPCAP84074 193 aa2.14□□□□□ -2.07
GAPVD1-211ENST00000467707 SLC36A2Q495M3 483 aa2.14□□□□□ -2.07
GAPVD1-211ENST00000467707 SLC37A2Q8TED4 501 aa2.14□□□□□ -2.07
GAPVD1-211ENST00000467707 KCTD7Q96MP8 289 aa2.14□□□□□ -2.07
GAPVD1-211ENST00000467707 EMC3Q9P0I2 261 aa2.14□□□□□ -2.07
GAPVD1-211ENST00000467707 HDGFL3Q9Y3E1 203 aa2.14□□□□□ -2.07
GAPVD1-211ENST00000467707 ATP6V1DQ9Y5K8 247 aa2.14□□□□□ -2.07
GAPVD1-211ENST00000467707 C5orf49A4QMS7 147 aa2.13□□□□□ -2.07
GAPVD1-211ENST00000467707 MRASO14807 208 aa2.13□□□□□ -2.07
GAPVD1-211ENST00000467707 TRAPPC3O43617 180 aa2.13□□□□□ -2.07
GAPVD1-211ENST00000467707 MT-CO2P00403 227 aa2.13□□□□□ -2.07
GAPVD1-211ENST00000467707 SOD1P00441 154 aa2.13□□□□□ -2.07
GAPVD1-211ENST00000467707 OCM2P0CE71 109 aa2.13□□□□□ -2.07
GAPVD1-211ENST00000467707 CRHBPP24387 322 aa2.13□□□□□ -2.07
GAPVD1-211ENST00000467707 DDTP30046 118 aa2.13□□□□□ -2.07
GAPVD1-211ENST00000467707 DAPP51397 102 aa2.13□□□□□ -2.07
GAPVD1-211ENST00000467707 HOXC5Q00444 222 aa2.13□□□□□ -2.07
GAPVD1-211ENST00000467707 FOXF1Q12946 379 aa2.13□□□□□ -2.07
GAPVD1-211ENST00000467707 AMTNQ6UX39 209 aa2.13□□□□□ -2.07
GAPVD1-211ENST00000467707 FAM151BQ6UXP7 276 aa2.13□□□□□ -2.07
GAPVD1-211ENST00000467707 Q8NDZ9 215 aa2.13□□□□□ -2.07
GAPVD1-211ENST00000467707 DRC3Q9H069 523 aa2.13□□□□□ -2.07
GAPVD1-211ENST00000467707 NSRP1Q9H0G5 558 aaKnown RBP2.13□□□□□ -2.07
GAPVD1-211ENST00000467707 HES4Q9HCC6 221 aa2.13□□□□□ -2.07
GAPVD1-211ENST00000467707 ZNHIT6Q9NWK9 470 aaKnown RBP2.13□□□□□ -2.07
GAPVD1-211ENST00000467707 C19orf71A6NCJ1 209 aa2.12□□□□□ -2.07
GAPVD1-211ENST00000467707 NDUFB2O95178 105 aa2.12□□□□□ -2.07
GAPVD1-211ENST00000467707 APOEP02649 317 aa2.12□□□□□ -2.07
GAPVD1-211ENST00000467707 TNFAIP8L2Q6P589 184 aaPredicted RBP2.12□□□□□ -2.07
GAPVD1-211ENST00000467707 LLPHQ9BRT6 129 aaKnown RBP2.12□□□□□ -2.07
GAPVD1-211ENST00000467707 CXCL16Q9H2A7 254 aa2.12□□□□□ -2.07
GAPVD1-211ENST00000467707 C16orf95Q9H693 158 aa2.12□□□□□ -2.07
GAPVD1-211ENST00000467707 NKIRAS1Q9NYS0 192 aa2.12□□□□□ -2.07
GAPVD1-211ENST00000467707 USE1Q9NZ43 259 aa2.12□□□□□ -2.07
GAPVD1-211ENST00000467707 PCYT1BQ9Y5K3 369 aaPredicted RBP2.12□□□□□ -2.07
GAPVD1-211ENST00000467707 MINOS1-NBL1R4GNA1 71 aa2.12□□□□□ -2.07
GAPVD1-211ENST00000467707 ADAMTSL1Q8N6G6 1762 aa2.11□□□□□ -2.07
GAPVD1-211ENST00000467707 IGHV3-15A0A0B4J1V0 119 aa2.11□□□□□ -2.07
GAPVD1-211ENST00000467707 MUC21A0A0G2JKD1 596 aa2.11□□□□□ -2.07
GAPVD1-211ENST00000467707 MUC21A0A140T8X8 626 aa2.11□□□□□ -2.07
GAPVD1-211ENST00000467707 A0A1W2PQL4 384 aaPredicted RBP2.11□□□□□ -2.07
GAPVD1-211ENST00000467707 IL6P05231 212 aa2.11□□□□□ -2.07
GAPVD1-211ENST00000467707 C8orf88P0DMB2 117 aa2.11□□□□□ -2.07
GAPVD1-211ENST00000467707 CD36P16671 472 aa2.11□□□□□ -2.07
GAPVD1-211ENST00000467707 CDC34P49427 236 aaPredicted RBP2.11□□□□□ -2.07
GAPVD1-211ENST00000467707 RPS24P62847 133 aaKnown RBP2.11□□□□□ -2.07
GAPVD1-211ENST00000467707 GNA13Q14344 377 aa2.11□□□□□ -2.07
GAPVD1-211ENST00000467707 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.11□□□□□ -2.07
GAPVD1-211ENST00000467707 N4BP2L1Q5TBK1 243 aaPredicted RBP2.11□□□□□ -2.07
GAPVD1-211ENST00000467707 JOSD2Q8TAC2 188 aa2.11□□□□□ -2.07
GAPVD1-211ENST00000467707 ZNF471Q9BX82 626 aaPredicted RBP2.11□□□□□ -2.07
GAPVD1-211ENST00000467707 C15orf41Q9Y2V0 281 aa2.11□□□□□ -2.07
GAPVD1-211ENST00000467707 SAMHD1Q9Y3Z3 626 aaKnown RBP2.11□□□□□ -2.07
GAPVD1-211ENST00000467707 SHANK3Q9BYB0 1731 aa2.11□□□□□ -2.07
GAPVD1-211ENST00000467707 F5H768 121 aa2.1□□□□□ -2.07
GAPVD1-211ENST00000467707 ZNF189O75820 626 aaPredicted RBP2.1□□□□□ -2.07
GAPVD1-211ENST00000467707 S1PR2O95136 353 aa2.1□□□□□ -2.07
GAPVD1-211ENST00000467707 CD24P25063 80 aa2.1□□□□□ -2.07
GAPVD1-211ENST00000467707 CRYBB3P26998 211 aa2.1□□□□□ -2.07
GAPVD1-211ENST00000467707 MAGEA2P43356 314 aa2.1□□□□□ -2.07
GAPVD1-211ENST00000467707 HSP90B2PQ58FF3 399 aa2.1□□□□□ -2.07
GAPVD1-211ENST00000467707 Q9BRP9 147 aa2.1□□□□□ -2.07
GAPVD1-211ENST00000467707 SLC2A9Q9NRM0 540 aa2.1□□□□□ -2.07
GAPVD1-211ENST00000467707 KLK5Q9Y337 293 aaPredicted RBP2.1□□□□□ -2.07
GAPVD1-211ENST00000467707 TRPM3Q9HCF6 1732 aaPredicted RBP2.1□□□□□ -2.07
GAPVD1-211ENST00000467707 SLIT2O94813 1529 aa2.1□□□□□ -2.07
GAPVD1-211ENST00000467707 VPS37CA5D8V6 355 aaPredicted RBP2.09□□□□□ -2.07
GAPVD1-211ENST00000467707 OR11H12B2RN74 326 aa2.09□□□□□ -2.07
GAPVD1-211ENST00000467707 UBE2L6O14933 153 aa2.09□□□□□ -2.07
GAPVD1-211ENST00000467707 SLC16A4O15374 487 aa2.09□□□□□ -2.07
GAPVD1-211ENST00000467707 COCHO43405 550 aa2.09□□□□□ -2.07
GAPVD1-211ENST00000467707 IGHV1-69P01742 117 aa2.09□□□□□ -2.07
GAPVD1-211ENST00000467707 CCL3P10147 92 aa2.09□□□□□ -2.07
GAPVD1-211ENST00000467707 CXCL2P19875 107 aa2.09□□□□□ -2.07
GAPVD1-211ENST00000467707 CXCL3P19876 107 aa2.09□□□□□ -2.07
GAPVD1-211ENST00000467707 TMEM33P57088 247 aa2.09□□□□□ -2.07
GAPVD1-211ENST00000467707 KRTAP12-4P60329 112 aa2.09□□□□□ -2.07
GAPVD1-211ENST00000467707 CXCR4P61073 352 aa2.09□□□□□ -2.07
GAPVD1-211ENST00000467707 HLA-DRB3P79483 266 aa2.09□□□□□ -2.07
GAPVD1-211ENST00000467707 COTL1Q14019 142 aa2.09□□□□□ -2.07
GAPVD1-211ENST00000467707 UAP1Q16222 522 aaPredicted RBP2.09□□□□□ -2.07
GAPVD1-211ENST00000467707 PLPPR5Q32ZL2 321 aa2.09□□□□□ -2.07
GAPVD1-211ENST00000467707 CST9Q5W186 159 aa2.09□□□□□ -2.07
GAPVD1-211ENST00000467707 OR11H2Q8NH07 326 aa2.09□□□□□ -2.07
GAPVD1-211ENST00000467707 MRPS24Q96EL2 167 aaKnown RBP2.09□□□□□ -2.07
GAPVD1-211ENST00000467707 MIEN1Q9BRT3 115 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms