RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 IGKV1D-13A0A0B4J2D9 117 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 NKX2-8O15522 239 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 PLAUP00749 431 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 HRASP01112 189 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 CSN3P07498 182 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 IGKV1-13P0DP09 117 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 FGF5P12034 268 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 LGALS4P56470 323 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 KLF3P57682 345 aaPredicted RBP7.77□□□□□ -1.17
HPS4-208ENST00000464362 SUMO1P63165 101 aaKnown RBP7.77□□□□□ -1.17
HPS4-208ENST00000464362 SUPT4H1P63272 117 aaKnown RBP7.77□□□□□ -1.17
HPS4-208ENST00000464362 RAB24Q969Q5 203 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 TRPM7Q96QT4 1865 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 FREM1Q5H8C1 2179 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 CTXND1A0A1B0GTU2 59 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 C20orf202A1L168 122 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 FAM157AC9JC47 383 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 DNPH1O43598 174 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 ZNF253O75346 499 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 CLDN14O95500 239 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 RHOBP62745 196 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 CCL20P78556 96 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 COL10A1Q03692 680 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 RNASEKQ6P5S7 137 aaKnown RBP7.77□□□□□ -1.17
HPS4-208ENST00000464362 H1FOOQ8IZA3 346 aaPredicted RBP7.77□□□□□ -1.17
HPS4-208ENST00000464362 TAF15Q92804 592 aaKnown RBP eCLIP7.77□□□□□ -1.17
HPS4-208ENST00000464362 CXXC4Q9H2H0 198 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 OOEPA6NGQ2 149 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 H0Y980 276 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 TRGC1P0CF51 173 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 SSTR5P35346 364 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 GLIPR1P48060 266 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 CNN1P51911 297 aaKnown RBP7.77□□□□□ -1.17
HPS4-208ENST00000464362 TPPP2P59282 170 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 UBE2L3P68036 154 aaKnown RBP7.77□□□□□ -1.17
HPS4-208ENST00000464362 RTP5Q14D33 572 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 TRIP6Q15654 476 aaKnown RBP7.77□□□□□ -1.17
HPS4-208ENST00000464362 TRAT1Q6PIZ9 186 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 FAM216AQ8WUB2 273 aa7.77□□□□□ -1.17
HPS4-208ENST00000464362 PCNX2A6NKB5 2137 aa7.76□□□□□ -1.17
HPS4-208ENST00000464362 GTF3C1Q12789 2109 aa7.76□□□□□ -1.17
HPS4-208ENST00000464362 DBX1A6NMT0 343 aa7.76□□□□□ -1.17
HPS4-208ENST00000464362 NDUFS6O75380 124 aaKnown RBP7.76□□□□□ -1.17
HPS4-208ENST00000464362 WNT5AP41221 380 aa7.76□□□□□ -1.17
HPS4-208ENST00000464362 MIC13Q5XKP0 118 aa7.76□□□□□ -1.17
HPS4-208ENST00000464362 TGIF2LXQ8IUE1 241 aa7.76□□□□□ -1.17
HPS4-208ENST00000464362 CPEB3Q8NE35 698 aaKnown RBP7.76□□□□□ -1.17
HPS4-208ENST00000464362 SGK494Q96LW2 274 aa7.76□□□□□ -1.17
HPS4-208ENST00000464362 FAM208BQ5VWN6 2430 aa7.76□□□□□ -1.17
HPS4-208ENST00000464362 CXorf65A6NEN9 183 aa7.76□□□□□ -1.17
HPS4-208ENST00000464362 NPIPB13A6NJU9 1138 aa7.76□□□□□ -1.17
HPS4-208ENST00000464362 NPIPB4C9JG80 1138 aa7.76□□□□□ -1.17
HPS4-208ENST00000464362 M0R143 59 aa7.76□□□□□ -1.17
HPS4-208ENST00000464362 S1PR2O95136 353 aa7.76□□□□□ -1.17
HPS4-208ENST00000464362 ACAA1P09110 424 aaPredicted RBP7.76□□□□□ -1.17
HPS4-208ENST00000464362 PTTG1IPP53801 180 aa7.76□□□□□ -1.17
HPS4-208ENST00000464362 PAX5Q02548 391 aa7.76□□□□□ -1.17
HPS4-208ENST00000464362 VAMP3Q15836 100 aa7.76□□□□□ -1.17
HPS4-208ENST00000464362 C10orf128Q5T292 105 aa7.76□□□□□ -1.17
HPS4-208ENST00000464362 PPP1R32Q7Z5V6 425 aa7.76□□□□□ -1.17
HPS4-208ENST00000464362 DCTN5Q9BTE1 182 aa7.76□□□□□ -1.17
HPS4-208ENST00000464362 CLDN16Q9Y5I7 305 aa7.76□□□□□ -1.17
HPS4-208ENST00000464362 hCG_38984A0A1B0GV85 526 aa7.76□□□□□ -1.17
HPS4-208ENST00000464362 SNURFLB1AK76 121 aa7.76□□□□□ -1.17
HPS4-208ENST00000464362 PTBP3O95758 552 aaKnown RBP7.76□□□□□ -1.17
HPS4-208ENST00000464362 RBP4P02753 201 aa7.76□□□□□ -1.17
HPS4-208ENST00000464362 RPL11P62913 178 aaKnown RBP7.76□□□□□ -1.17
HPS4-208ENST00000464362 GNB4Q9HAV0 340 aa7.76□□□□□ -1.17
HPS4-208ENST00000464362 NOTCH2Q04721 2471 aa7.76□□□□□ -1.17
HPS4-208ENST00000464362 THADAQ6YHU6 1953 aa7.76□□□□□ -1.17
HPS4-208ENST00000464362 IGHV3-72A0A0B4J1Y9 119 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 SLC31A2O15432 143 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 SYNGR3O43761 229 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 SLC25A5P05141 298 aaKnown RBP7.75□□□□□ -1.17
HPS4-208ENST00000464362 CD1BP29016 333 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 UCP2P55851 309 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 KIAA1644Q3SXP7 199 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 RIPPLY2Q5TAB7 128 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 ZNF385CQ66K41 422 aaPredicted RBP7.75□□□□□ -1.17
HPS4-208ENST00000464362 ABHD12Q8N2K0 398 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 DRAM1Q8N682 238 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 OR4C5Q8NGB2 326 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 VN1R17PQ8TDU5 208 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 GDF15Q99988 308 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 CARHSP1Q9Y2V2 147 aaKnown RBP7.75□□□□□ -1.17
HPS4-208ENST00000464362 CUL9Q8IWT3 2517 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 PTPRQQ9UMZ3 2332 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 LAMA3Q16787 3333 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 IGKV1-12A0A0C4DH73 117 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 LOC102723971A0A1B0GUV8 181 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 IGKV1D-12P01611 117 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 NPY1RP25929 384 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 IL3RAP26951 378 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 OR4S2Q8NH73 311 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 ZDHHC16Q969W1 377 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 RCC1LQ96I51 464 aaKnown RBP7.75□□□□□ -1.17
HPS4-208ENST00000464362 FKBP11Q9NYL4 201 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 PILRBQ9UKJ0 227 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 CLPSP04118 112 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 PRDX2P32119 198 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms