RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 GLDNQ6ZMI3 551 aaPredicted RBP14.01□□□□□ -0.17
VPS52-214ENST00000463486 ZNF383Q8NA42 475 aa14.01□□□□□ -0.17
VPS52-214ENST00000463486 OR8H1Q8NGG4 311 aa14.01□□□□□ -0.17
VPS52-214ENST00000463486 SGMS2Q8NHU3 365 aa14.01□□□□□ -0.17
VPS52-214ENST00000463486 SNAPC3Q92966 411 aa14.01□□□□□ -0.17
VPS52-214ENST00000463486 HPGDSO60760 199 aa14□□□□□ -0.17
VPS52-214ENST00000463486 TUSC2O75896 110 aa14□□□□□ -0.17
VPS52-214ENST00000463486 IGHG2P01859 326 aa14□□□□□ -0.17
VPS52-214ENST00000463486 CTXN2P0C2S0 81 aa14□□□□□ -0.17
VPS52-214ENST00000463486 VSIG10L2P0DP72 767 aa14□□□□□ -0.17
VPS52-214ENST00000463486 VDAC2P45880 294 aaPredicted RBP14□□□□□ -0.17
VPS52-214ENST00000463486 DRAXINQ8NBI3 349 aaPredicted RBP14□□□□□ -0.17
VPS52-214ENST00000463486 ZNF436-AS1Q8NC38 126 aaPredicted RBP14□□□□□ -0.17
VPS52-214ENST00000463486 BEST4Q8NFU0 473 aa14□□□□□ -0.17
VPS52-214ENST00000463486 RAB2BQ8WUD1 216 aa14□□□□□ -0.17
VPS52-214ENST00000463486 BCL7BQ9BQE9 202 aa14□□□□□ -0.17
VPS52-214ENST00000463486 SDHAF2Q9NX18 166 aa14□□□□□ -0.17
VPS52-214ENST00000463486 IGLV2-14P01704 120 aa13.99□□□□□ -0.17
VPS52-214ENST00000463486 CNTFRP26992 372 aa13.99□□□□□ -0.17
VPS52-214ENST00000463486 GPR12P47775 334 aa13.99□□□□□ -0.17
VPS52-214ENST00000463486 ACTBP60709 375 aa13.99□□□□□ -0.17
VPS52-214ENST00000463486 TMEM69Q5SWH9 247 aa13.99□□□□□ -0.17
VPS52-214ENST00000463486 FAM131AQ6UXB0 335 aa13.99□□□□□ -0.17
VPS52-214ENST00000463486 NPBQ8NG41 125 aa13.99□□□□□ -0.17
VPS52-214ENST00000463486 DYNC2LI1Q8TCX1 351 aa13.99□□□□□ -0.17
VPS52-214ENST00000463486 GINS4Q9BRT9 223 aa13.99□□□□□ -0.17
VPS52-214ENST00000463486 LIN7CQ9NUP9 197 aaKnown RBP13.99□□□□□ -0.17
VPS52-214ENST00000463486 ZNF221Q9UK13 617 aa13.99□□□□□ -0.17
VPS52-214ENST00000463486 CEPT1Q9Y6K0 416 aa13.99□□□□□ -0.17
VPS52-214ENST00000463486 OR5H14A6NHG9 310 aa13.98□□□□□ -0.17
VPS52-214ENST00000463486 NCBP2LA6PVI3 153 aaKnown RBP13.98□□□□□ -0.17
VPS52-214ENST00000463486 CD28P10747 220 aa13.98□□□□□ -0.17
VPS52-214ENST00000463486 NAT1P18440 290 aa13.98□□□□□ -0.17
VPS52-214ENST00000463486 NFYAP23511 347 aaPredicted RBP13.98□□□□□ -0.17
VPS52-214ENST00000463486 TCTEX1D4Q5JR98 221 aa13.98□□□□□ -0.17
VPS52-214ENST00000463486 C10orf99Q6UWK7 81 aa13.98□□□□□ -0.17
VPS52-214ENST00000463486 C11orf44Q8N8P7 122 aa13.98□□□□□ -0.17
VPS52-214ENST00000463486 OR2D2Q9H210 308 aa13.98□□□□□ -0.17
VPS52-214ENST00000463486 MIXL1Q9H2W2 232 aa13.98□□□□□ -0.17
VPS52-214ENST00000463486 OR2W1Q9Y3N9 320 aa13.98□□□□□ -0.17
VPS52-214ENST00000463486 IGKV1D-13A0A0B4J2D9 117 aa13.97□□□□□ -0.17
VPS52-214ENST00000463486 MEIS3P1A6NDR6 274 aa13.97□□□□□ -0.17
VPS52-214ENST00000463486 ADARB2-AS1A8MUL3 147 aa13.97□□□□□ -0.17
VPS52-214ENST00000463486 H3BMQ9 156 aa13.97□□□□□ -0.17
VPS52-214ENST00000463486 NDUFA3O95167 84 aa13.97□□□□□ -0.17
VPS52-214ENST00000463486 IGKV1-13P0DP09 117 aa13.97□□□□□ -0.17
VPS52-214ENST00000463486 MC5RP33032 325 aa13.97□□□□□ -0.17
VPS52-214ENST00000463486 CBX5P45973 191 aa13.97□□□□□ -0.17
VPS52-214ENST00000463486 C9orf152Q5JTZ5 239 aa13.97□□□□□ -0.17
VPS52-214ENST00000463486 ISOC1Q96CN7 298 aa13.97□□□□□ -0.17
VPS52-214ENST00000463486 HSPB9Q9BQS6 159 aa13.97□□□□□ -0.17
VPS52-214ENST00000463486 M0R1X1 148 aa13.96□□□□□ -0.17
VPS52-214ENST00000463486 IGKV1-16P04430 117 aa13.96□□□□□ -0.17
VPS52-214ENST00000463486 FCER2P06734 321 aa13.96□□□□□ -0.17
VPS52-214ENST00000463486 MZT2AQ6P582 158 aa13.96□□□□□ -0.17
VPS52-214ENST00000463486 LYSMD2Q8IV50 215 aa13.96□□□□□ -0.17
VPS52-214ENST00000463486 GPX8Q8TED1 209 aa13.96□□□□□ -0.17
VPS52-214ENST00000463486 DDB2Q92466 427 aa13.96□□□□□ -0.17
VPS52-214ENST00000463486 AP3S1Q92572 193 aa13.96□□□□□ -0.17
VPS52-214ENST00000463486 NOL4LQ96MY1 436 aaPredicted RBP13.96□□□□□ -0.17
VPS52-214ENST00000463486 RBM38Q9H0Z9 239 aaKnown RBP13.96□□□□□ -0.17
VPS52-214ENST00000463486 ZNF107Q9UII5 783 aaPredicted RBP13.96□□□□□ -0.17
VPS52-214ENST00000463486 SCOCQ9UIL1 159 aa13.96□□□□□ -0.17
VPS52-214ENST00000463486 WASHC3Q9Y3C0 194 aa13.96□□□□□ -0.17
VPS52-214ENST00000463486 NOTCH1P46531 2555 aa13.96□□□□□ -0.17
VPS52-214ENST00000463486 CTDSP2O14595 271 aa13.95□□□□□ -0.18
VPS52-214ENST00000463486 PRSS3P35030 304 aa13.95□□□□□ -0.18
VPS52-214ENST00000463486 CD83Q01151 205 aa13.95□□□□□ -0.18
VPS52-214ENST00000463486 EIF4EBP1Q13541 118 aaPredicted RBP13.95□□□□□ -0.18
VPS52-214ENST00000463486 MMDQ15546 238 aa13.95□□□□□ -0.18
VPS52-214ENST00000463486 OR5AU1Q8NGC0 362 aa13.95□□□□□ -0.18
VPS52-214ENST00000463486 OR5AP2Q8NGF4 316 aa13.95□□□□□ -0.18
VPS52-214ENST00000463486 RNF5Q99942 180 aa13.95□□□□□ -0.18
VPS52-214ENST00000463486 MEGF8Q7Z7M0 2845 aa13.95□□□□□ -0.18
VPS52-214ENST00000463486 PLXNB1O43157 2135 aa13.94□□□□□ -0.18
VPS52-214ENST00000463486 LINC00473A8K010 186 aa13.94□□□□□ -0.18
VPS52-214ENST00000463486 J3QRK9 145 aa13.94□□□□□ -0.18
VPS52-214ENST00000463486 NBR2O15453 112 aa13.94□□□□□ -0.18
VPS52-214ENST00000463486 OR5H8P0DN80 308 aa13.94□□□□□ -0.18
VPS52-214ENST00000463486 DUTP33316 252 aaKnown RBP13.94□□□□□ -0.18
VPS52-214ENST00000463486 LUMP51884 338 aaPredicted RBP13.94□□□□□ -0.18
VPS52-214ENST00000463486 C5orf64Q2M2E5 130 aa13.94□□□□□ -0.18
VPS52-214ENST00000463486 ARSJQ5FYB0 599 aaPredicted RBP13.94□□□□□ -0.18
VPS52-214ENST00000463486 ZNF660Q6AZW8 331 aaPredicted RBP13.94□□□□□ -0.18
VPS52-214ENST00000463486 OVCH2Q7RTZ1 564 aa13.94□□□□□ -0.18
VPS52-214ENST00000463486 SLC35E3Q7Z769 313 aa13.94□□□□□ -0.18
VPS52-214ENST00000463486 CITED2Q99967 270 aaPredicted RBP13.94□□□□□ -0.18
VPS52-214ENST00000463486 RASL11BQ9BPW5 248 aa13.94□□□□□ -0.18
VPS52-214ENST00000463486 SLIRPQ9GZT3 109 aaKnown RBP13.94□□□□□ -0.18
VPS52-214ENST00000463486 CCDC59Q9P031 241 aaKnown RBP13.94□□□□□ -0.18
VPS52-214ENST00000463486 LINC00527Q9UJ94 153 aa13.94□□□□□ -0.18
VPS52-214ENST00000463486 ADAM30Q9UKF2 790 aa13.94□□□□□ -0.18
VPS52-214ENST00000463486 MRPS7Q9Y2R9 242 aaKnown RBP13.94□□□□□ -0.18
VPS52-214ENST00000463486 SMIM31A0A1B0GVY4 71 aa13.93□□□□□ -0.18
VPS52-214ENST00000463486 FBXO24O75426 580 aa13.93□□□□□ -0.18
VPS52-214ENST00000463486 RBBP9O75884 186 aa13.93□□□□□ -0.18
VPS52-214ENST00000463486 HLA-DRB1P01911 266 aa13.93□□□□□ -0.18
VPS52-214ENST00000463486 AADACP22760 399 aa13.93□□□□□ -0.18
VPS52-214ENST00000463486 FCGR2CP31995 323 aa13.93□□□□□ -0.18
VPS52-214ENST00000463486 ARPC4P59998 168 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms