RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.21□□□□□ -1.26
VPS50-208ENST00000458707 DEGS1O15121 323 aa7.21□□□□□ -1.26
VPS50-208ENST00000458707 CYTIPO60759 359 aa7.21□□□□□ -1.26
VPS50-208ENST00000458707 ZNF737O75373 536 aa7.21□□□□□ -1.26
VPS50-208ENST00000458707 IGLV2-14P01704 120 aa7.21□□□□□ -1.26
VPS50-208ENST00000458707 SERPINE2P07093 398 aa7.21□□□□□ -1.26
VPS50-208ENST00000458707 MEF2BQ02080 365 aaPredicted RBP7.21□□□□□ -1.26
VPS50-208ENST00000458707 COL10A1Q03692 680 aa7.21□□□□□ -1.26
VPS50-208ENST00000458707 TMEM241Q24JQ0 296 aa7.21□□□□□ -1.26
VPS50-208ENST00000458707 NCR3LG1Q68D85 454 aa7.21□□□□□ -1.26
VPS50-208ENST00000458707 C16orf82Q7Z2V1 217 aa7.21□□□□□ -1.26
VPS50-208ENST00000458707 RPS19BP1Q86WX3 136 aaKnown RBP7.21□□□□□ -1.26
VPS50-208ENST00000458707 ZDHHC23Q8IYP9 409 aa7.21□□□□□ -1.26
VPS50-208ENST00000458707 ZNF664Q8N3J9 261 aa7.21□□□□□ -1.26
VPS50-208ENST00000458707 TMEM45BQ96B21 275 aa7.21□□□□□ -1.26
VPS50-208ENST00000458707 CLDN23Q96B33 292 aa7.21□□□□□ -1.26
VPS50-208ENST00000458707 SMIM7Q9BQ49 75 aa7.21□□□□□ -1.26
VPS50-208ENST00000458707 DUSP23Q9BVJ7 150 aa7.21□□□□□ -1.26
VPS50-208ENST00000458707 RBKSQ9H477 322 aa7.21□□□□□ -1.26
VPS50-208ENST00000458707 MSL2Q9HCI7 577 aa7.21□□□□□ -1.26
VPS50-208ENST00000458707 IL36RNQ9UBH0 155 aa7.21□□□□□ -1.26
VPS50-208ENST00000458707 CACNG5Q9UF02 275 aa7.21□□□□□ -1.26
VPS50-208ENST00000458707 PRSS50Q9UI38 385 aa7.21□□□□□ -1.26
VPS50-208ENST00000458707 FAM90A26D6RGX4 464 aa7.2□□□□□ -1.26
VPS50-208ENST00000458707 CXCL13O43927 109 aa7.2□□□□□ -1.26
VPS50-208ENST00000458707 KLF7O75840 302 aaPredicted RBP7.2□□□□□ -1.26
VPS50-208ENST00000458707 IGKV1-5P01602 117 aa7.2□□□□□ -1.26
VPS50-208ENST00000458707 CD55P08174 381 aa7.2□□□□□ -1.26
VPS50-208ENST00000458707 GPM6AP51674 278 aa7.2□□□□□ -1.26
VPS50-208ENST00000458707 RPL23P62829 140 aaKnown RBP7.2□□□□□ -1.26
VPS50-208ENST00000458707 BSXQ3C1V8 233 aa7.2□□□□□ -1.26
VPS50-208ENST00000458707 VHLLQ6RSH7 139 aa7.2□□□□□ -1.26
VPS50-208ENST00000458707 TMEM170AQ8WVE7 144 aa7.2□□□□□ -1.26
VPS50-208ENST00000458707 TAF15Q92804 592 aaKnown RBP eCLIP7.2□□□□□ -1.26
VPS50-208ENST00000458707 HIST1H2AAQ96QV6 131 aa7.2□□□□□ -1.26
VPS50-208ENST00000458707 OCIAD1Q9NX40 245 aa7.2□□□□□ -1.26
VPS50-208ENST00000458707 CRIM1Q9NZV1 1036 aa7.2□□□□□ -1.26
VPS50-208ENST00000458707 WNT16Q9UBV4 365 aa7.2□□□□□ -1.26
VPS50-208ENST00000458707 IL17BQ9UHF5 180 aa7.2□□□□□ -1.26
VPS50-208ENST00000458707 ZFP30Q9Y2G7 519 aa7.2□□□□□ -1.26
VPS50-208ENST00000458707 CD300LBA8K4G0 201 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 TCF21O43680 179 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 IL18BPO95998 194 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 TYMSP04818 313 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 GZMHP20718 246 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 CD82P27701 267 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 EPHA8P29322 1005 aaPredicted RBP7.19□□□□□ -1.26
VPS50-208ENST00000458707 OR3A1P47881 315 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 FAM3BP58499 235 aaPredicted RBP7.19□□□□□ -1.26
VPS50-208ENST00000458707 IL11RAQ14626 422 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 ATP6V1FQ16864 119 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 IZUMO4Q1ZYL8 232 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 C4orf48Q5BLP8 95 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 TMEM14EPQ6UXP3 125 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 YRDCQ86U90 279 aaKnown RBP7.19□□□□□ -1.26
VPS50-208ENST00000458707 RPP25LQ8N5L8 163 aaKnown RBP7.19□□□□□ -1.26
VPS50-208ENST00000458707 AGBL5Q8NDL9 886 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 OR10V1Q8NGI7 309 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 OR5A2Q8NGI9 324 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 OR51H1Q8NH63 302 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 OR10D3Q8NH80 312 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 ANAPC16Q96DE5 110 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 OR4C12Q96R67 309 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 LINC00470Q9BZP3 86 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 ZNF576Q9H609 170 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 ERRFI1Q9UJM3 462 aaPredicted RBP7.19□□□□□ -1.26
VPS50-208ENST00000458707 PCSK5Q92824 1860 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 MYO15AQ9UKN7 3530 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 HCFC1P51610 2035 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 TRAV24A0A0B4J272 114 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 A0A0G2JMM0 328 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 A0A1W2PPB8 328 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 A0A1W2PRS3 328 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 KIR3DP1A8MWS1 328 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 HSPB6O14558 160 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 HRASP01112 189 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 IGKV1D-33P01593 117 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 IGKV1-33P01594 117 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 JMJD7P0C870 316 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 IAPPP10997 89 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 MDKP21741 143 aaPredicted RBP7.19□□□□□ -1.26
VPS50-208ENST00000458707 APLNRP35414 380 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 GALR1P47211 349 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 ERVFC1-1P60608 527 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 RPS20P60866 119 aaKnown RBP7.19□□□□□ -1.26
VPS50-208ENST00000458707 ADIRFQ15847 76 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 ZNF585BQ52M93 769 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 ACTL10Q5JWF8 245 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 VWA1Q6PCB0 445 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 C17orf78Q8N4C9 275 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 PSMF1Q92530 271 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 LHX4Q969G2 390 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 APOBEC3DQ96AK3 386 aaPredicted RBP7.19□□□□□ -1.26
VPS50-208ENST00000458707 C12orf49Q9H741 205 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 TMEM9BQ9NQ34 198 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 USF3Q68DE3 2245 aa7.19□□□□□ -1.26
VPS50-208ENST00000458707 WDR87Q6ZQQ6 2873 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 IGKV3D-15A0A087WSY6 115 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 CTXND1A0A1B0GTU2 59 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 LRRC3CA6NJW4 275 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms