RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 IGHV1-3A0A0C4DH29 117 aa13.57□□□□□ -0.24
TRIM39-211ENST00000458516 TXNL1O43396 289 aa13.57□□□□□ -0.24
TRIM39-211ENST00000458516 GAPDHP04406 335 aaKnown RBP13.57□□□□□ -0.24
TRIM39-211ENST00000458516 IFITM3Q01628 133 aa13.57□□□□□ -0.24
TRIM39-211ENST00000458516 SCGB2B2Q4G0G5 96 aa13.57□□□□□ -0.24
TRIM39-211ENST00000458516 PLA1AQ53H76 456 aa13.57□□□□□ -0.24
TRIM39-211ENST00000458516 CCDC144NLQ6NUI1 221 aa13.57□□□□□ -0.24
TRIM39-211ENST00000458516 Q6YL49 198 aa13.57□□□□□ -0.24
TRIM39-211ENST00000458516 TGIF2LXQ8IUE1 241 aa13.57□□□□□ -0.24
TRIM39-211ENST00000458516 OR8H3Q8N146 312 aa13.57□□□□□ -0.24
TRIM39-211ENST00000458516 DRAM1Q8N682 238 aa13.57□□□□□ -0.24
TRIM39-211ENST00000458516 SIGLECL1Q8N7X8 197 aa13.57□□□□□ -0.24
TRIM39-211ENST00000458516 CFHR4Q92496 578 aa13.57□□□□□ -0.24
TRIM39-211ENST00000458516 MRGPRFQ96AM1 343 aa13.57□□□□□ -0.24
TRIM39-211ENST00000458516 S1PR3Q99500 378 aa13.57□□□□□ -0.24
TRIM39-211ENST00000458516 CCL28Q9NRJ3 127 aa13.57□□□□□ -0.24
TRIM39-211ENST00000458516 MCUBQ9NWR8 336 aa13.57□□□□□ -0.24
TRIM39-211ENST00000458516 MXRA5Q9NR99 2828 aa13.56□□□□□ -0.24
TRIM39-211ENST00000458516 LINC00854A0A1B0GVQ3 168 aa13.56□□□□□ -0.24
TRIM39-211ENST00000458516 VGLL3A8MV65 326 aa13.56□□□□□ -0.24
TRIM39-211ENST00000458516 PLA2G10O15496 165 aa13.56□□□□□ -0.24
TRIM39-211ENST00000458516 SLC22A5O76082 557 aa13.56□□□□□ -0.24
TRIM39-211ENST00000458516 UCP3P55916 312 aa13.56□□□□□ -0.24
TRIM39-211ENST00000458516 MSMO1Q15800 293 aa13.56□□□□□ -0.24
TRIM39-211ENST00000458516 OR13C8Q8NGS7 320 aa13.56□□□□□ -0.24
TRIM39-211ENST00000458516 TERB2Q8NHR7 220 aa13.56□□□□□ -0.24
TRIM39-211ENST00000458516 PRRT1Q99946 306 aa13.56□□□□□ -0.24
TRIM39-211ENST00000458516 NABP2Q9BQ15 211 aa13.56□□□□□ -0.24
TRIM39-211ENST00000458516 C7orf50Q9BRJ6 194 aaKnown RBP13.56□□□□□ -0.24
TRIM39-211ENST00000458516 M0R1X1 148 aa13.55□□□□□ -0.24
TRIM39-211ENST00000458516 TIMM23O14925 209 aa13.55□□□□□ -0.24
TRIM39-211ENST00000458516 CT45A6P0DMU7 189 aa13.55□□□□□ -0.24
TRIM39-211ENST00000458516 CT45A5P0DMU8 189 aa13.55□□□□□ -0.24
TRIM39-211ENST00000458516 CT45A7P0DMV0 189 aa13.55□□□□□ -0.24
TRIM39-211ENST00000458516 GNRHRP30968 328 aa13.55□□□□□ -0.24
TRIM39-211ENST00000458516 BTCP35070 178 aa13.55□□□□□ -0.24
TRIM39-211ENST00000458516 DYNLT3P51808 116 aa13.55□□□□□ -0.24
TRIM39-211ENST00000458516 EIF4EBP1Q13541 118 aaPredicted RBP13.55□□□□□ -0.24
TRIM39-211ENST00000458516 HABP2Q14520 560 aaPredicted RBP13.55□□□□□ -0.24
TRIM39-211ENST00000458516 AANATQ16613 207 aa13.55□□□□□ -0.24
TRIM39-211ENST00000458516 LRRC75BQ2VPJ9 315 aa13.55□□□□□ -0.24
TRIM39-211ENST00000458516 IDO2Q6ZQW0 420 aa13.55□□□□□ -0.24
TRIM39-211ENST00000458516 ZNF818PQ6ZRF7 136 aa13.55□□□□□ -0.24
TRIM39-211ENST00000458516 ZDHHC16Q969W1 377 aa13.55□□□□□ -0.24
TRIM39-211ENST00000458516 SCP2D1Q9UJQ7 156 aa13.55□□□□□ -0.24
TRIM39-211ENST00000458516 TBC1D24Q9ULP9 559 aa13.55□□□□□ -0.24
TRIM39-211ENST00000458516 NAP1L6A6NFF2 107 aa13.54□□□□□ -0.24
TRIM39-211ENST00000458516 IER3P46695 156 aa13.54□□□□□ -0.24
TRIM39-211ENST00000458516 ARHGDIBP52566 201 aa13.54□□□□□ -0.24
TRIM39-211ENST00000458516 LINC00205P59089 165 aa13.54□□□□□ -0.24
TRIM39-211ENST00000458516 BAMBIQ13145 260 aa13.54□□□□□ -0.24
TRIM39-211ENST00000458516 GLDNQ6ZMI3 551 aaPredicted RBP13.54□□□□□ -0.24
TRIM39-211ENST00000458516 MOB3BQ86TA1 216 aa13.54□□□□□ -0.24
TRIM39-211ENST00000458516 DRAXINQ8NBI3 349 aaPredicted RBP13.54□□□□□ -0.24
TRIM39-211ENST00000458516 ZBTB34Q8NCN2 500 aa13.54□□□□□ -0.24
TRIM39-211ENST00000458516 PIFOQ8TCI5 191 aa13.54□□□□□ -0.24
TRIM39-211ENST00000458516 MARCH1Q8TCQ1 289 aa13.54□□□□□ -0.24
TRIM39-211ENST00000458516 AKR1E2Q96JD6 320 aa13.54□□□□□ -0.24
TRIM39-211ENST00000458516 SSX3Q99909 188 aa13.54□□□□□ -0.24
TRIM39-211ENST00000458516 RSRP1Q9BUV0 290 aa13.54□□□□□ -0.24
TRIM39-211ENST00000458516 OCEL1Q9H607 264 aa13.54□□□□□ -0.24
TRIM39-211ENST00000458516 IGHV3-72A0A0B4J1Y9 119 aa13.53□□□□□ -0.24
TRIM39-211ENST00000458516 FAM90A9PA6NNJ1 464 aa13.53□□□□□ -0.24
TRIM39-211ENST00000458516 H3BUX3 64 aa13.53□□□□□ -0.24
TRIM39-211ENST00000458516 GPR31O00270 319 aa13.53□□□□□ -0.24
TRIM39-211ENST00000458516 LYRM1O43325 122 aa13.53□□□□□ -0.24
TRIM39-211ENST00000458516 IGHV4-59P01825 116 aa13.53□□□□□ -0.24
TRIM39-211ENST00000458516 PGAM2P15259 253 aa13.53□□□□□ -0.24
TRIM39-211ENST00000458516 DUTP33316 252 aaKnown RBP13.53□□□□□ -0.24
TRIM39-211ENST00000458516 RAB13P51153 203 aa13.53□□□□□ -0.24
TRIM39-211ENST00000458516 FBLN7Q53RD9 439 aa13.53□□□□□ -0.24
TRIM39-211ENST00000458516 LPCAT3Q6P1A2 487 aa13.53□□□□□ -0.24
TRIM39-211ENST00000458516 SLC38A6Q8IZM9 456 aa13.53□□□□□ -0.24
TRIM39-211ENST00000458516 ZNF383Q8NA42 475 aa13.53□□□□□ -0.24
TRIM39-211ENST00000458516 BVESQ8NE79 360 aa13.53□□□□□ -0.24
TRIM39-211ENST00000458516 BORCS5Q969J3 196 aa13.53□□□□□ -0.24
TRIM39-211ENST00000458516 GPHA2Q96T91 129 aa13.53□□□□□ -0.24
TRIM39-211ENST00000458516 CUBNO60494 3623 aa13.52□□□□□ -0.24
TRIM39-211ENST00000458516 LINC00473A8K010 186 aa13.52□□□□□ -0.25
TRIM39-211ENST00000458516 CENPXA8MT69 81 aa13.52□□□□□ -0.25
TRIM39-211ENST00000458516 H0YJW9 148 aa13.52□□□□□ -0.25
TRIM39-211ENST00000458516 HOXA3O43365 443 aaPredicted RBP13.52□□□□□ -0.25
TRIM39-211ENST00000458516 TNFSF12O43508 249 aa13.52□□□□□ -0.25
TRIM39-211ENST00000458516 VENTXO95231 258 aa13.52□□□□□ -0.25
TRIM39-211ENST00000458516 CD24P25063 80 aa13.52□□□□□ -0.25
TRIM39-211ENST00000458516 BRS3P32247 399 aa13.52□□□□□ -0.25
TRIM39-211ENST00000458516 ECI1P42126 302 aa13.52□□□□□ -0.25
TRIM39-211ENST00000458516 THBS3P49746 956 aa13.52□□□□□ -0.25
TRIM39-211ENST00000458516 RPL30P62888 115 aaKnown RBP13.52□□□□□ -0.25
TRIM39-211ENST00000458516 ASAH1Q13510 395 aa13.52□□□□□ -0.25
TRIM39-211ENST00000458516 SURF2Q15527 256 aaPredicted RBP13.52□□□□□ -0.25
TRIM39-211ENST00000458516 OR5AN1Q8NGI8 311 aa13.52□□□□□ -0.25
TRIM39-211ENST00000458516 ZNF418Q8TF45 676 aaPredicted RBP13.52□□□□□ -0.25
TRIM39-211ENST00000458516 SSMEM1Q8WWF3 244 aa13.52□□□□□ -0.25
TRIM39-211ENST00000458516 DDB2Q92466 427 aa13.52□□□□□ -0.25
TRIM39-211ENST00000458516 RBMXL1Q96E39 390 aaKnown RBP13.52□□□□□ -0.25
TRIM39-211ENST00000458516 ESM1Q9NQ30 184 aa13.52□□□□□ -0.25
TRIM39-211ENST00000458516 DNAJC9-AS1A6NH13 148 aa13.51□□□□□ -0.25
TRIM39-211ENST00000458516 SNRNP70P08621 437 aaKnown RBP13.51□□□□□ -0.25
TRIM39-211ENST00000458516 PI3P19957 117 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms