RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 TBX15Q96SF7 602 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 CXXC4Q9H2H0 198 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 RNF39Q9H2S5 420 aa4.57□□□□□ -1.68
CSMD3-204ENST00000455883 A0A1B0GTI1 187 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 FITM1A5D6W6 292 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 C6orf15Q6UXA7 325 aaPredicted RBP4.56□□□□□ -1.68
CSMD3-204ENST00000455883 SMOC1Q9H4F8 434 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 OR51B2Q9Y5P1 312 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 ENSAO43768 121 aaKnown RBP4.56□□□□□ -1.68
CSMD3-204ENST00000455883 IGHMP01871 453 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 ADRA2AP08913 450 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 TNFRSF1BP20333 461 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 ASTLQ6HA08 431 aaPredicted RBP4.56□□□□□ -1.68
CSMD3-204ENST00000455883 ATOH7Q8N100 152 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 SIRT6Q8N6T7 355 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 MRGPRDQ8TDS7 321 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 ARHGAP5-AS1Q96IT6 56 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 HIST1H4GQ99525 98 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 PRDM14Q9GZV8 571 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 LYZL6O75951 148 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 GPR183P32249 361 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 RIPPLY3P57055 190 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 GAGE1Q13065 139 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 PUSL1Q8N0Z8 303 aaKnown RBP4.56□□□□□ -1.68
CSMD3-204ENST00000455883 CYB561D1Q8N8Q1 229 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 RNASEH2CQ8TDP1 164 aaKnown RBP4.56□□□□□ -1.68
CSMD3-204ENST00000455883 IL17FQ96PD4 163 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 GPA33Q99795 319 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 TMEM238C9JI98 176 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 K7ESF4 209 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 FRS3O43559 492 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 SLC25A20O43772 301 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 SLC16A13Q7RTY0 426 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 PAM16Q9Y3D7 125 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 CCL5P13501 91 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 CMC4P56277 68 aaPredicted RBP4.56□□□□□ -1.68
CSMD3-204ENST00000455883 ZFAND6Q6FIF0 208 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 Q6ZNB5 142 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 FLYWCH2Q96CP2 140 aaKnown RBP4.56□□□□□ -1.68
CSMD3-204ENST00000455883 PCOLCE2Q9UKZ9 415 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 ATP23Q9Y6H3 246 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 OR4C46A6NHA9 309 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 FNDC10F2Z333 226 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 NGFP01138 241 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 ADIPOQQ15848 244 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 BHLHA15Q7RTS1 189 aaPredicted RBP4.56□□□□□ -1.68
CSMD3-204ENST00000455883 ANKRD33Q7Z3H0 272 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 NECAP1Q8NC96 275 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 AUP1Q9Y679 476 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 IQCF6A8MYZ5 107 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 TMEM25Q86YD3 366 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 SELENOHQ8IZQ5 122 aaKnown RBP4.56□□□□□ -1.68
CSMD3-204ENST00000455883 OR10AC1Q8NH08 325 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 HIGD1AQ9Y241 93 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 RAXQ9Y2V3 346 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 COX11Q9Y6N1 276 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 SRSF10O75494 262 aaKnown RBP4.56□□□□□ -1.68
CSMD3-204ENST00000455883 TCTN1Q2MV58 587 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 ORMDL3Q8N138 153 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 TEX37Q96LM6 180 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 OPN3Q9H1Y3 402 aaPredicted RBP4.56□□□□□ -1.68
CSMD3-204ENST00000455883 ZNF430Q9H8G1 570 aaPredicted RBP4.56□□□□□ -1.68
CSMD3-204ENST00000455883 LAMTOR3Q9UHA4 124 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 A0A1B0GUT8 65 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 TMEM50AO95807 157 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 CACNG7P62955 275 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 EDDM3AQ14507 147 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 C19orf54Q5BKX5 351 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 ALKBH2Q6NS38 261 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 RGP1Q92546 391 aaPredicted RBP4.56□□□□□ -1.68
CSMD3-204ENST00000455883 DNAJC30Q96LL9 226 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 FOXB1Q99853 325 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 MRPL16Q9NX20 251 aaKnown RBP4.56□□□□□ -1.68
CSMD3-204ENST00000455883 MRPL42Q9Y6G3 142 aaKnown RBP4.56□□□□□ -1.68
CSMD3-204ENST00000455883 A0A1W2PNV4 684 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 SSPNQ14714 243 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 SPATA31B1PQ5VZV4 182 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 C11orf42Q8N5U0 333 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 MED20Q9H944 212 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 GNB4Q9HAV0 340 aa4.56□□□□□ -1.68
CSMD3-204ENST00000455883 DLL1O00548 723 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 ZXDCQ2QGD7 858 aaPredicted RBP4.55□□□□□ -1.68
CSMD3-204ENST00000455883 SLC37A2Q8TED4 501 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 MRAP2Q96G30 205 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 RHNO1Q9BSD3 238 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 ZMAT3Q9HA38 289 aaKnown RBP4.55□□□□□ -1.68
CSMD3-204ENST00000455883 TRAV39A0A0B4J263 110 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 FAM231BA6NCW3 169 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 PEX11BO96011 259 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 WDR38Q5JTN6 314 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 F2Z2F3 143 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 ZNF205O95201 554 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 EML2O95834 649 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 ASAH2BP0C7U1 165 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 LGALS3P17931 250 aaKnown RBP4.55□□□□□ -1.68
CSMD3-204ENST00000455883 RPS27LQ71UM5 84 aaKnown RBP4.55□□□□□ -1.68
CSMD3-204ENST00000455883 TMEM99Q8N816 258 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 MAST4O15021 2626 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 FOXL1Q12952 345 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 OR8B12Q8NGG6 310 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms