RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 IL5P05113 134 aa8.93□□□□□ -0.98
SCN9A-205ENST00000454569 HOXB4P17483 251 aaPredicted RBP8.93□□□□□ -0.98
SCN9A-205ENST00000454569 PRTN3P24158 256 aa8.93□□□□□ -0.98
SCN9A-205ENST00000454569 LUMP51884 338 aaPredicted RBP8.93□□□□□ -0.98
SCN9A-205ENST00000454569 UCP3P55916 312 aa8.93□□□□□ -0.98
SCN9A-205ENST00000454569 HERV-K104P61576 105 aa8.93□□□□□ -0.98
SCN9A-205ENST00000454569 CD300CQ08708 224 aa8.93□□□□□ -0.98
SCN9A-205ENST00000454569 C4orf46Q504U0 113 aa8.93□□□□□ -0.98
SCN9A-205ENST00000454569 BTNL3Q6UXE8 466 aa8.93□□□□□ -0.98
SCN9A-205ENST00000454569 DRAM1Q8N682 238 aa8.93□□□□□ -0.98
SCN9A-205ENST00000454569 LINC01356Q8N9X3 169 aa8.93□□□□□ -0.98
SCN9A-205ENST00000454569 ZNF251Q9BRH9 671 aa8.93□□□□□ -0.98
SCN9A-205ENST00000454569 SEC22CQ9BRL7 303 aa8.93□□□□□ -0.98
SCN9A-205ENST00000454569 ABHD14AQ9BUJ0 271 aa8.93□□□□□ -0.98
SCN9A-205ENST00000454569 HIF1ANQ9NWT6 349 aa8.93□□□□□ -0.98
SCN9A-205ENST00000454569 SDHAF2Q9NX18 166 aa8.93□□□□□ -0.98
SCN9A-205ENST00000454569 SOX21Q9Y651 276 aaPredicted RBP8.93□□□□□ -0.98
SCN9A-205ENST00000454569 ANK3Q12955 4377 aaKnown RBP8.93□□□□□ -0.98
SCN9A-205ENST00000454569 IGHV3OR16-10A0A075B7F0 116 aa8.92□□□□□ -0.98
SCN9A-205ENST00000454569 TOX4O94842 621 aa8.92□□□□□ -0.98
SCN9A-205ENST00000454569 TGFAP01135 160 aa8.92□□□□□ -0.98
SCN9A-205ENST00000454569 IGLV1-47P01700 117 aa8.92□□□□□ -0.98
SCN9A-205ENST00000454569 AKR1C4P17516 323 aa8.92□□□□□ -0.98
SCN9A-205ENST00000454569 CD34P28906 385 aa8.92□□□□□ -0.98
SCN9A-205ENST00000454569 ECI1P42126 302 aa8.92□□□□□ -0.98
SCN9A-205ENST00000454569 RPL30P62888 115 aaKnown RBP8.92□□□□□ -0.98
SCN9A-205ENST00000454569 SUPT4H1P63272 117 aaKnown RBP8.92□□□□□ -0.98
SCN9A-205ENST00000454569 KRTAP1-1Q07627 177 aa8.92□□□□□ -0.98
SCN9A-205ENST00000454569 EIF4EBP1Q13541 118 aaPredicted RBP8.92□□□□□ -0.98
SCN9A-205ENST00000454569 LY6G6FQ5SQ64 297 aa8.92□□□□□ -0.98
SCN9A-205ENST00000454569 ZNF626Q68DY1 528 aa8.92□□□□□ -0.98
SCN9A-205ENST00000454569 C1orf122Q6ZSJ8 110 aa8.92□□□□□ -0.98
SCN9A-205ENST00000454569 LHFPL4Q7Z7J7 247 aa8.92□□□□□ -0.98
SCN9A-205ENST00000454569 KIR3DL3Q8N743 410 aa8.92□□□□□ -0.98
SCN9A-205ENST00000454569 OR2AK2Q8NG84 335 aa8.92□□□□□ -0.98
SCN9A-205ENST00000454569 ZNF596Q8TC21 504 aa8.92□□□□□ -0.98
SCN9A-205ENST00000454569 LHX4Q969G2 390 aa8.92□□□□□ -0.98
SCN9A-205ENST00000454569 TMEM186Q96B77 213 aa8.92□□□□□ -0.98
SCN9A-205ENST00000454569 SCGB3A2Q96PL1 93 aa8.92□□□□□ -0.98
SCN9A-205ENST00000454569 ALX4Q9H161 411 aaPredicted RBP8.92□□□□□ -0.98
SCN9A-205ENST00000454569 METTL8Q9H825 291 aaKnown RBP8.92□□□□□ -0.98
SCN9A-205ENST00000454569 RBM7Q9Y580 266 aaKnown RBP8.92□□□□□ -0.98
SCN9A-205ENST00000454569 KPTNQ9Y664 436 aa8.92□□□□□ -0.98
SCN9A-205ENST00000454569 HIVEP1P15822 2718 aa8.92□□□□□ -0.98
SCN9A-205ENST00000454569 SAA2-SAA4A0A096LPE2 208 aa8.91□□□□□ -0.98
SCN9A-205ENST00000454569 A0A1W2PPH5 198 aa8.91□□□□□ -0.98
SCN9A-205ENST00000454569 LINC00473A8K010 186 aa8.91□□□□□ -0.98
SCN9A-205ENST00000454569 A8MV72 311 aaPredicted RBP8.91□□□□□ -0.98
SCN9A-205ENST00000454569 SNRPGP15A8MWD9 76 aa8.91□□□□□ -0.98
SCN9A-205ENST00000454569 PLXNB1O43157 2135 aa8.91□□□□□ -0.98
SCN9A-205ENST00000454569 PGLYRP1O75594 196 aaPredicted RBP8.91□□□□□ -0.98
SCN9A-205ENST00000454569 RBP4P02753 201 aa8.91□□□□□ -0.98
SCN9A-205ENST00000454569 CTSDP07339 412 aaPredicted RBP8.91□□□□□ -0.98
SCN9A-205ENST00000454569 OR4E1P0C645 316 aa8.91□□□□□ -0.98
SCN9A-205ENST00000454569 SAA2P0DJI9 122 aaPredicted RBP8.91□□□□□ -0.98
SCN9A-205ENST00000454569 PIGPP57054 158 aa8.91□□□□□ -0.98
SCN9A-205ENST00000454569 BRWD1-AS2P59051 145 aa8.91□□□□□ -0.98
SCN9A-205ENST00000454569 TAS2R31P59538 309 aa8.91□□□□□ -0.98
SCN9A-205ENST00000454569 UBE2MP61081 183 aaKnown RBP8.91□□□□□ -0.98
SCN9A-205ENST00000454569 CD83Q01151 205 aa8.91□□□□□ -0.98
SCN9A-205ENST00000454569 PPP1R1AQ13522 171 aa8.91□□□□□ -0.98
SCN9A-205ENST00000454569 SP6Q3SY56 376 aa8.91□□□□□ -0.98
SCN9A-205ENST00000454569 Q3ZCU0 254 aa8.91□□□□□ -0.98
SCN9A-205ENST00000454569 DCAF12L2Q5VW00 463 aa8.91□□□□□ -0.98
SCN9A-205ENST00000454569 FAHD2BQ6P2I3 314 aaPredicted RBP8.91□□□□□ -0.98
SCN9A-205ENST00000454569 SLC25A42Q86VD7 318 aa8.91□□□□□ -0.98
SCN9A-205ENST00000454569 LYG1Q8N1E2 194 aa8.91□□□□□ -0.98
SCN9A-205ENST00000454569 DYNAPQ8N1N2 210 aa8.91□□□□□ -0.98
SCN9A-205ENST00000454569 OR4P4Q8NGL7 312 aa8.91□□□□□ -0.98
SCN9A-205ENST00000454569 OR9G1Q8NH87 305 aa8.91□□□□□ -0.98
SCN9A-205ENST00000454569 FAHD2AQ96GK7 314 aa8.91□□□□□ -0.98
SCN9A-205ENST00000454569 AJUBAQ96IF1 538 aa8.91□□□□□ -0.98
SCN9A-205ENST00000454569 UNKLQ9H9P5 680 aaKnown RBP8.91□□□□□ -0.98
SCN9A-205ENST00000454569 SLC2A9Q9NRM0 540 aa8.91□□□□□ -0.98
SCN9A-205ENST00000454569 KCNS2Q9ULS6 477 aa8.91□□□□□ -0.98
SCN9A-205ENST00000454569 TET2Q6N021 2002 aaPredicted RBP8.91□□□□□ -0.98
SCN9A-205ENST00000454569 CENPVL3A0A0U1RRI6 287 aa8.9□□□□□ -0.98
SCN9A-205ENST00000454569 ODF3BA8MYP8 253 aa8.9□□□□□ -0.98
SCN9A-205ENST00000454569 ITGB1BP1O14713 200 aa8.9□□□□□ -0.98
SCN9A-205ENST00000454569 RGS11O94810 467 aa8.9□□□□□ -0.98
SCN9A-205ENST00000454569 REG1BP48304 166 aa8.9□□□□□ -0.98
SCN9A-205ENST00000454569 DHODHQ02127 395 aa8.9□□□□□ -0.98
SCN9A-205ENST00000454569 SURF2Q15527 256 aaPredicted RBP8.9□□□□□ -0.98
SCN9A-205ENST00000454569 KLF17Q5JT82 389 aaPredicted RBP8.9□□□□□ -0.98
SCN9A-205ENST00000454569 RUSC1-AS1Q66K80 236 aa8.9□□□□□ -0.98
SCN9A-205ENST00000454569 REC114Q7Z4M0 266 aa8.9□□□□□ -0.98
SCN9A-205ENST00000454569 TBC1D26Q86UD7 250 aa8.9□□□□□ -0.98
SCN9A-205ENST00000454569 SLC38A6Q8IZM9 456 aa8.9□□□□□ -0.98
SCN9A-205ENST00000454569 LINC00311Q8N616 119 aa8.9□□□□□ -0.98
SCN9A-205ENST00000454569 ZNF645Q8N7E2 425 aa8.9□□□□□ -0.98
SCN9A-205ENST00000454569 BVESQ8NE79 360 aa8.9□□□□□ -0.98
SCN9A-205ENST00000454569 ST6GALNAC6Q969X2 333 aa8.9□□□□□ -0.98
SCN9A-205ENST00000454569 SMR3AQ99954 134 aa8.9□□□□□ -0.98
SCN9A-205ENST00000454569 CLEC7AQ9BXN2 247 aa8.9□□□□□ -0.98
SCN9A-205ENST00000454569 C7orf69Q9H7B7 122 aa8.9□□□□□ -0.98
SCN9A-205ENST00000454569 C14orf166Q9Y224 244 aaKnown RBP8.9□□□□□ -0.98
SCN9A-205ENST00000454569 LY6LH3BQJ8 138 aa8.9□□□□□ -0.99
SCN9A-205ENST00000454569 GPR31O00270 319 aa8.9□□□□□ -0.99
SCN9A-205ENST00000454569 HLA-AP01891 365 aaKnown RBP8.9□□□□□ -0.99
SCN9A-205ENST00000454569 ARG1P05089 322 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms