RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 PLCH2O75038 1416 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 DCCP43146 1447 aa3.35□□□□□ -1.87
HMGB3P21-201ENST00000452483 BAZ2AQ9UIF9 1905 aaKnown RBP3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 UQCRHLA0A096LP55 91 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 TMED7-TICAM2A0A0A6YYA0 188 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 TRAV19A0A0A6YYK7 116 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 C5orf63A6NC05 138 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 EPOPA6NHQ4 379 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 ZNF705GA8MUZ8 300 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 KLLNB2CW77 178 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 F6UZH7 168 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 ISLRO14498 428 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 TP53I11O14683 189 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 SLC37A4O43826 429 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 GGCTO75223 188 aaKnown RBP3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 DUSP14O95147 198 aaKnown RBP3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 IFNA7P01567 189 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 UQCRHP07919 91 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 CHTF8P0CG12 524 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 SMIM17P0DL12 118 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 CTSEP14091 401 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 PPP1CCP36873 323 aaKnown RBP3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 THBS3P49746 956 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 LHX2P50458 406 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 POLR2HP52434 150 aaKnown RBP3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 TAS2R30P59541 319 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 GABARAPL2P60520 117 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 MAXP61244 160 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 HERVK_113P61574 105 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 SELENOWP63302 87 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 HIST1H1AQ02539 215 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 MMDQ15546 238 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 ZNF239Q16600 458 aaKnown RBP3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 ORMDL2Q53FV1 153 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 NHLRC3Q5JS37 347 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 FAM53AQ6NSI3 398 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 HAGHLQ6PII5 290 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 SHISA6Q6ZSJ9 500 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 RFLNAQ6ZTI6 216 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 ZNF584Q8IVC4 421 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 EXOC3-AS1Q8N2X6 119 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 DRAM1Q8N682 238 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 KRTCAP2Q8N6L1 136 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 Q8N9P0 234 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 TMEM229BQ8NBD8 167 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 STARD4Q96DR4 205 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 YPEL4Q96NS1 127 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 SOSTQ9BQB4 213 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 SYT15Q9BQS2 421 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 LXNQ9BS40 222 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 CHCHD5Q9BSY4 110 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 PARP12Q9H0J9 701 aaKnown RBP3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 Q9H3A6 140 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 CXorf21Q9HAI6 301 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 NIT2Q9NQR4 276 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 KCNIP2Q9NS61 270 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 DHCR7Q9UBM7 475 aaKnown RBP3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 ZNF230Q9UIE0 474 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 KLK13Q9UKR3 277 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 TRAPPC2LQ9UL33 140 aa3.34□□□□□ -1.87
HMGB3P21-201ENST00000452483 IBTKQ9P2D0 1353 aaPredicted RBP3.34□□□□□ -1.88
HMGB3P21-201ENST00000452483 DOCK3Q8IZD9 2030 aa3.34□□□□□ -1.88
HMGB3P21-201ENST00000452483 HECW2Q9P2P5 1572 aa3.34□□□□□ -1.88
HMGB3P21-201ENST00000452483 A0A0X1KG70 313 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 A0A1B0GVG6 124 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 DUXBA0A1W2PPF3 345 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 C20orf202A1L168 122 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 B4DEV8 164 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 CLDN25C9JDP6 229 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 NDUFC2-KCTD14E9PQ53 114 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 LGALS9O00182 355 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 PEX7O00628 323 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 TNFSF13O75888 250 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 ZNF682O95780 498 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 BGLAPP02818 100 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 ADRA2AP08913 450 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 PGAM2P15259 253 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 ZNF30P17039 623 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 IL1RNP18510 177 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 EVI2AP22794 236 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 PPIBP23284 216 aaKnown RBP3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 GABRA3P34903 492 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 ATP5G3P48201 142 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 NCS1P62166 190 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 CRADDP78560 199 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 GNA12Q03113 381 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 CAV1Q03135 178 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 PLCXD2Q0VAA5 305 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 PRR4Q16378 134 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 CCL15Q16663 113 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 MORN2Q502X0 79 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 PRR30Q53SZ7 412 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 STPG1Q5TH74 334 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 GLYATQ6IB77 296 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 C19orf48Q6RUI8 117 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 IL34Q6ZMJ4 242 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 HSD17B13Q7Z5P4 300 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 PDZD9Q8IXQ8 264 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 OR4C6Q8NH72 309 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 SLC25A40Q8TBP6 338 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms