RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 MSL2Q9HCI7 577 aa5.71□□□□□ -1.49
CSDE1-205ENST00000438362 PILRBQ9UKJ0 227 aa5.71□□□□□ -1.49
CSDE1-205ENST00000438362 NCOR1O75376 2440 aa5.71□□□□□ -1.49
CSDE1-205ENST00000438362 LOC102723996A0A087X1L8 192 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 IGKV1-12A0A0C4DH73 117 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 C5orf52A6NGY3 159 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 TMEM250H0YL14 139 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 KBTBD11O94819 623 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 WISP1O95388 367 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 CXorf1O96002 111 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 IGKV1D-12P01611 117 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 CRYGSP22914 178 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 DDTP30046 118 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 GNG10P50151 68 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 MRPS11P82912 194 aaKnown RBP5.71□□□□□ -1.5
CSDE1-205ENST00000438362 RPEL1Q2QD12 228 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 PPP1R32Q7Z5V6 425 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 DRAM1Q8N682 238 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 ZNF645Q8N7E2 425 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 OR4P4Q8NGL7 312 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 OR4D5Q8NGN0 318 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 CLDND2Q8NHS1 167 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 NABP1Q96AH0 204 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 WDR61Q9GZS3 305 aaKnown RBP5.71□□□□□ -1.5
CSDE1-205ENST00000438362 TMEM167BQ9NRX6 74 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 IGKV1D-13A0A0B4J2D9 117 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 NDUFB4O95168 129 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 IGKV1-13P0DP09 117 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 SRP14P37108 136 aaKnown RBP5.71□□□□□ -1.5
CSDE1-205ENST00000438362 AMTP48728 403 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 CCL20P78556 96 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 ID3Q02535 119 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 MST1LQ2TV78 715 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 ZNF385CQ66K41 422 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-205ENST00000438362 WDR73Q6P4I2 378 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 Q8WTZ3 238 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 OR5P3Q8WZ94 311 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 TMEM45BQ96B21 275 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 GMPPAQ96IJ6 420 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-205ENST00000438362 PARLQ9H300 379 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 CLCF1Q9UBD9 225 aa5.71□□□□□ -1.5
CSDE1-205ENST00000438362 ZNF106Q9H2Y7 1883 aaKnown RBP5.71□□□□□ -1.5
CSDE1-205ENST00000438362 GDF9O60383 454 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 MPDU1O75352 247 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 NPY1RP25929 384 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 PTGDSP41222 190 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 SOX8P57073 446 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 NRN1LQ496H8 165 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 FAM162BQ5T6X4 162 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 ZIC4Q8N9L1 334 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 RNF166Q96A37 237 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-205ENST00000438362 NOL4LQ96MY1 436 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-205ENST00000438362 SRD5A3Q9H8P0 318 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 FOXD3Q9UJU5 478 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-205ENST00000438362 ALPK3Q96L96 1907 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 A0A0G2JMM0 328 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 A0A1W2PPB8 328 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 A0A1W2PRS3 328 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 KIR3DP1A8MWS1 328 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 TCAPO15273 167 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 NDUFA2O43678 99 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 AGFG2O95081 481 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 GCGP01275 180 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 UMODP07911 640 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 CSRP1P21291 193 aaKnown RBP5.7□□□□□ -1.5
CSDE1-205ENST00000438362 UCP2P55851 309 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 ICAM4Q14773 271 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 PSG5Q15238 335 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 LRRC75BQ2VPJ9 315 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 DEFB109BQ30KR1 87 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 RHOVQ96L33 236 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 TXNDC17Q9BRA2 123 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 COA4Q9NYJ1 87 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 TECRQ9NZ01 308 aaKnown RBP5.7□□□□□ -1.5
CSDE1-205ENST00000438362 DOCK8Q8NF50 2099 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 RAB29O14966 203 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 ZG16O60844 167 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 HPRT1P00492 218 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 OR10J1P30954 320 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 PI4KAP42356 2102 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 KLF3P57682 345 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-205ENST00000438362 COX19Q49B96 90 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 TEPPQ6URK8 271 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 ZNF826PQ6ZT77 177 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 C1orf147Q96MC9 270 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-205ENST00000438362 HES7Q9BYE0 225 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 HES4Q9HCC6 221 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 NPVFQ9HCQ7 196 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 IL36RNQ9UBH0 155 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 IGKV1-27A0A075B6S5 117 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 LRRC3CA6NJW4 275 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 ZNF729A6NN14 1252 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-205ENST00000438362 K7EQM0 130 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 CHEK1O14757 476 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 ZNF253O75346 499 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 CLDN14O95500 239 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 DEFA4P12838 97 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 AGAP20933 346 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 HNRNPA3P51991 378 aaKnown RBP5.7□□□□□ -1.5
CSDE1-205ENST00000438362 SPCS3P61009 180 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms