RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 RNF150Q9ULK6 438 aa12.7□□□□□ -0.38
VARS-216ENST00000428445 H0YJW9 148 aa12.69□□□□□ -0.38
VARS-216ENST00000428445 H7C2Y5 167 aa12.69□□□□□ -0.38
VARS-216ENST00000428445 RBBP9O75884 186 aa12.69□□□□□ -0.38
VARS-216ENST00000428445 OR8U9P0C7N5 309 aa12.69□□□□□ -0.38
VARS-216ENST00000428445 RANBP1P43487 201 aa12.69□□□□□ -0.38
VARS-216ENST00000428445 DEFA5Q01523 94 aa12.69□□□□□ -0.38
VARS-216ENST00000428445 ACSM3Q53FZ2 586 aa12.69□□□□□ -0.38
VARS-216ENST00000428445 C1orf100Q5SVJ3 147 aa12.69□□□□□ -0.38
VARS-216ENST00000428445 PYHIN1Q6K0P9 492 aa12.69□□□□□ -0.38
VARS-216ENST00000428445 FBLIM1Q8WUP2 373 aa12.69□□□□□ -0.38
VARS-216ENST00000428445 HDHD3Q9BSH5 251 aaPredicted RBP12.69□□□□□ -0.38
VARS-216ENST00000428445 TM2D1Q9BX74 207 aa12.69□□□□□ -0.38
VARS-216ENST00000428445 MGAT4AQ9UM21 535 aa12.69□□□□□ -0.38
VARS-216ENST00000428445 TNCP24821 2201 aa12.68□□□□□ -0.38
VARS-216ENST00000428445 OR5H14A6NHG9 310 aa12.68□□□□□ -0.38
VARS-216ENST00000428445 PROP1O75360 226 aa12.68□□□□□ -0.38
VARS-216ENST00000428445 BPNT1O95861 308 aa12.68□□□□□ -0.38
VARS-216ENST00000428445 CA2P00918 260 aa12.68□□□□□ -0.38
VARS-216ENST00000428445 RPS27AP62979 156 aaKnown RBP12.68□□□□□ -0.38
VARS-216ENST00000428445 PSG5Q15238 335 aa12.68□□□□□ -0.38
VARS-216ENST00000428445 LAIR2Q6ISS4 152 aa12.68□□□□□ -0.38
VARS-216ENST00000428445 ZNF880Q6PDB4 577 aa12.68□□□□□ -0.38
VARS-216ENST00000428445 CD200R1LQ6Q8B3 271 aa12.68□□□□□ -0.38
VARS-216ENST00000428445 EDA2RQ9HAV5 297 aa12.68□□□□□ -0.38
VARS-216ENST00000428445 CHMP1AQ9HD42 196 aaPredicted RBP12.68□□□□□ -0.38
VARS-216ENST00000428445 OR1A1Q9P1Q5 309 aa12.68□□□□□ -0.38
VARS-216ENST00000428445 METTL1Q9UBP6 276 aaKnown RBP12.68□□□□□ -0.38
VARS-216ENST00000428445 SLC23A1Q9UHI7 598 aa12.68□□□□□ -0.38
VARS-216ENST00000428445 ADAM30Q9UKF2 790 aa12.68□□□□□ -0.38
VARS-216ENST00000428445 A0A0A6YYD4 124 aa12.67□□□□□ -0.38
VARS-216ENST00000428445 TRBV6-6A0A0A6YYG2 114 aa12.67□□□□□ -0.38
VARS-216ENST00000428445 ANKRD34BA5PLL1 514 aa12.67□□□□□ -0.38
VARS-216ENST00000428445 LDLRAD4O15165 306 aa12.67□□□□□ -0.38
VARS-216ENST00000428445 NAPSAO96009 420 aa12.67□□□□□ -0.38
VARS-216ENST00000428445 TRGV3P03979 118 aa12.67□□□□□ -0.38
VARS-216ENST00000428445 SRMP19623 302 aa12.67□□□□□ -0.38
VARS-216ENST00000428445 CD40LGP29965 261 aa12.67□□□□□ -0.38
VARS-216ENST00000428445 AKIRIN2Q53H80 203 aa12.67□□□□□ -0.38
VARS-216ENST00000428445 MOB1BQ7L9L4 216 aa12.67□□□□□ -0.38
VARS-216ENST00000428445 SVOPQ8N4V2 548 aa12.67□□□□□ -0.38
VARS-216ENST00000428445 OR5T1Q8NG75 326 aa12.67□□□□□ -0.38
VARS-216ENST00000428445 FLYWCH2Q96CP2 140 aaKnown RBP12.67□□□□□ -0.38
VARS-216ENST00000428445 TMEM59Q9BXS4 323 aa12.67□□□□□ -0.38
VARS-216ENST00000428445 ZNF355PQ9NSJ1 428 aa12.67□□□□□ -0.38
VARS-216ENST00000428445 C19orf73Q9NVV2 129 aa12.67□□□□□ -0.38
VARS-216ENST00000428445 PLEKHJ1Q9NW61 149 aa12.67□□□□□ -0.38
VARS-216ENST00000428445 WASHC3Q9Y3C0 194 aa12.67□□□□□ -0.38
VARS-216ENST00000428445 IGLV1-51P01701 117 aa12.66□□□□□ -0.38
VARS-216ENST00000428445 IGKV1-16P04430 117 aa12.66□□□□□ -0.38
VARS-216ENST00000428445 UNC119Q13432 240 aa12.66□□□□□ -0.38
VARS-216ENST00000428445 ZNF562Q6V9R5 426 aa12.66□□□□□ -0.38
VARS-216ENST00000428445 AHSA2Q719I0 299 aa12.66□□□□□ -0.38
VARS-216ENST00000428445 LRRTM1Q86UE6 522 aa12.66□□□□□ -0.38
VARS-216ENST00000428445 ANKRD13BQ86YJ7 626 aa12.66□□□□□ -0.38
VARS-216ENST00000428445 OR5AN1Q8NGI8 311 aa12.66□□□□□ -0.38
VARS-216ENST00000428445 GRPEL2Q8TAA5 225 aa12.66□□□□□ -0.38
VARS-216ENST00000428445 EDARADDQ8WWZ3 215 aa12.66□□□□□ -0.38
VARS-216ENST00000428445 AGMATQ9BSE5 352 aa12.66□□□□□ -0.38
VARS-216ENST00000428445 C11orf54Q9H0W9 315 aaPredicted RBP12.66□□□□□ -0.38
VARS-216ENST00000428445 FKBP14Q9NWM8 211 aa12.66□□□□□ -0.38
VARS-216ENST00000428445 TMEM14DPA8MWL7 114 aa12.65□□□□□ -0.38
VARS-216ENST00000428445 SLC22A1O15245 554 aa12.65□□□□□ -0.38
VARS-216ENST00000428445 SOCS1O15524 211 aa12.65□□□□□ -0.38
VARS-216ENST00000428445 SCTP09683 121 aa12.65□□□□□ -0.38
VARS-216ENST00000428445 ARSBP15848 533 aa12.65□□□□□ -0.38
VARS-216ENST00000428445 ZBTB25P24278 435 aa12.65□□□□□ -0.38
VARS-216ENST00000428445 CEACAM6P40199 344 aa12.65□□□□□ -0.38
VARS-216ENST00000428445 PJVKQ0ZLH3 352 aa12.65□□□□□ -0.38
VARS-216ENST00000428445 ZNF383Q8NA42 475 aa12.65□□□□□ -0.38
VARS-216ENST00000428445 BPIFB6Q8NFQ5 453 aa12.65□□□□□ -0.38
VARS-216ENST00000428445 URM1Q9BTM9 101 aaKnown RBP12.65□□□□□ -0.38
VARS-216ENST00000428445 MND1Q9BWT6 205 aa12.65□□□□□ -0.38
VARS-216ENST00000428445 AK3Q9UIJ7 227 aa12.65□□□□□ -0.38
VARS-216ENST00000428445 HSF4Q9ULV5 492 aa12.65□□□□□ -0.38
VARS-216ENST00000428445 STUB1Q9UNE7 303 aa12.65□□□□□ -0.38
VARS-216ENST00000428445 ERICH4A6NGS2 130 aa12.64□□□□□ -0.39
VARS-216ENST00000428445 HSPA12AO43301 675 aa12.64□□□□□ -0.39
VARS-216ENST00000428445 GNAO1P09471 354 aa12.64□□□□□ -0.39
VARS-216ENST00000428445 RPS16P62249 146 aaKnown RBP12.64□□□□□ -0.39
VARS-216ENST00000428445 SSBP2P81877 361 aaPredicted RBP12.64□□□□□ -0.39
VARS-216ENST00000428445 FXYD3Q14802 87 aa12.64□□□□□ -0.39
VARS-216ENST00000428445 IL34Q6ZMJ4 242 aa12.64□□□□□ -0.39
VARS-216ENST00000428445 FAM89BQ8N5H3 189 aa12.64□□□□□ -0.39
VARS-216ENST00000428445 OR6M1Q8NGM8 313 aa12.64□□□□□ -0.39
VARS-216ENST00000428445 PTX4Q96A99 478 aa12.64□□□□□ -0.39
VARS-216ENST00000428445 ELOVL1Q9BW60 279 aa12.64□□□□□ -0.39
VARS-216ENST00000428445 SLA2Q9H6Q3 261 aa12.64□□□□□ -0.39
VARS-216ENST00000428445 CASQ2O14958 399 aaPredicted RBP12.63□□□□□ -0.39
VARS-216ENST00000428445 SLC25A17O43808 307 aa12.63□□□□□ -0.39
VARS-216ENST00000428445 TRBV12-3P01733 135 aa12.63□□□□□ -0.39
VARS-216ENST00000428445 CDK1P06493 297 aa12.63□□□□□ -0.39
VARS-216ENST00000428445 UCHL1P09936 223 aa12.63□□□□□ -0.39
VARS-216ENST00000428445 CPEP16870 476 aa12.63□□□□□ -0.39
VARS-216ENST00000428445 QRFPP83859 136 aa12.63□□□□□ -0.39
VARS-216ENST00000428445 SPHARQ15513 63 aa12.63□□□□□ -0.39
VARS-216ENST00000428445 HAGHQ16775 308 aa12.63□□□□□ -0.39
VARS-216ENST00000428445 HSD17B12Q53GQ0 312 aa12.63□□□□□ -0.39
VARS-216ENST00000428445 RBM48Q5RL73 367 aaKnown RBP12.63□□□□□ -0.39
VARS-216ENST00000428445 SGPP2Q8IWX5 399 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms