RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 SIRT7Q9NRC8 400 aa11.8□□□□□ -0.52
COL20A1-203ENST00000422202 HOXB3P14651 431 aaPredicted RBP11.8□□□□□ -0.52
COL20A1-203ENST00000422202 AWAT1Q58HT5 328 aa11.8□□□□□ -0.52
COL20A1-203ENST00000422202 YAE1D1Q9NRH1 226 aa11.8□□□□□ -0.52
COL20A1-203ENST00000422202 RCC2Q9P258 522 aaKnown RBP11.8□□□□□ -0.52
COL20A1-203ENST00000422202 PHF3Q92576 2039 aaKnown RBP11.8□□□□□ -0.52
COL20A1-203ENST00000422202 LOC285556D6RIA3 1793 aa11.8□□□□□ -0.52
COL20A1-203ENST00000422202 COL25A1Q9BXS0 654 aaPredicted RBP11.8□□□□□ -0.52
COL20A1-203ENST00000422202 LIPT2A6NK58 231 aa11.8□□□□□ -0.52
COL20A1-203ENST00000422202 A8MWL6 223 aa11.8□□□□□ -0.52
COL20A1-203ENST00000422202 M0QZK8 103 aa11.8□□□□□ -0.52
COL20A1-203ENST00000422202 GGCTO75223 188 aaKnown RBP11.8□□□□□ -0.52
COL20A1-203ENST00000422202 CTSDP07339 412 aaPredicted RBP11.8□□□□□ -0.52
COL20A1-203ENST00000422202 VSIG10L2P0DP72 767 aa11.8□□□□□ -0.52
COL20A1-203ENST00000422202 TNFSF10P50591 281 aa11.8□□□□□ -0.52
COL20A1-203ENST00000422202 KIR2DL4Q99706 377 aa11.8□□□□□ -0.52
COL20A1-203ENST00000422202 SF3B5Q9BWJ5 86 aaKnown RBP11.8□□□□□ -0.52
COL20A1-203ENST00000422202 IFT22Q9H7X7 185 aa11.8□□□□□ -0.52
COL20A1-203ENST00000422202 TBX21Q9UL17 535 aa11.8□□□□□ -0.52
COL20A1-203ENST00000422202 PXMP4Q9Y6I8 212 aa11.8□□□□□ -0.52
COL20A1-203ENST00000422202 B4DEV8 164 aa11.8□□□□□ -0.52
COL20A1-203ENST00000422202 SPATA45Q537H7 98 aa11.8□□□□□ -0.52
COL20A1-203ENST00000422202 ZNF418Q8TF45 676 aaPredicted RBP11.8□□□□□ -0.52
COL20A1-203ENST00000422202 ITGBL1O95965 494 aaPredicted RBP11.79□□□□□ -0.52
COL20A1-203ENST00000422202 PCSK4Q6UW60 755 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 TMEM136Q6ZRR5 245 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 LINC01555Q8NAE3 123 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 C10orf35Q96D05 121 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 TNFRSF12AQ9NP84 129 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 KCNE1BA0A087WTH5 132 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 C10orf126Q8N4M7 172 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 ZNF488Q96MN9 340 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 OR2A4O95047 310 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 LYZL2Q7Z4W2 148 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 SPNS2Q8IVW8 549 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 ZNF383Q8NA42 475 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 OR2A7Q96R45 310 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 NPFFR1Q9GZQ6 430 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 NPVFQ9HCQ7 196 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 MIOXQ9UGB7 285 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 TNFRSF18Q9Y5U5 241 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 POLEQ07864 2286 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 GREB1Q4ZG55 1949 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 PROB1E7EW31 1015 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 OTX1P32242 354 aaPredicted RBP11.79□□□□□ -0.52
COL20A1-203ENST00000422202 ZNF645Q8N7E2 425 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 TMEFF2Q9UIK5 374 aaPredicted RBP11.79□□□□□ -0.52
COL20A1-203ENST00000422202 GDF9O60383 454 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 ZNF688P0C7X2 276 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 CEACAM4O75871 244 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 FTH1P19P0C7X4 201 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 COX19Q49B96 90 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 ERASQ7Z444 233 aa11.79□□□□□ -0.52
COL20A1-203ENST00000422202 LIFP15018 202 aa11.78□□□□□ -0.52
COL20A1-203ENST00000422202 UCP2P55851 309 aa11.78□□□□□ -0.52
COL20A1-203ENST00000422202 DEFB121Q5J5C9 76 aa11.78□□□□□ -0.52
COL20A1-203ENST00000422202 IBA57Q5T440 356 aaKnown RBP11.78□□□□□ -0.52
COL20A1-203ENST00000422202 PRR19A6NJB7 356 aa11.78□□□□□ -0.52
COL20A1-203ENST00000422202 SLC25A20O43772 301 aa11.78□□□□□ -0.52
COL20A1-203ENST00000422202 CRYBB2P43320 205 aa11.78□□□□□ -0.52
COL20A1-203ENST00000422202 ZNF324BQ6AW86 544 aaPredicted RBP11.78□□□□□ -0.52
COL20A1-203ENST00000422202 SLC16A13Q7RTY0 426 aa11.78□□□□□ -0.52
COL20A1-203ENST00000422202 TMEM183AQ8IXX5 376 aa11.78□□□□□ -0.52
COL20A1-203ENST00000422202 C1orf162Q8NEQ5 155 aaPredicted RBP11.78□□□□□ -0.52
COL20A1-203ENST00000422202 PRELID3AQ96N28 172 aa11.78□□□□□ -0.52
COL20A1-203ENST00000422202 DCAF10Q5QP82 559 aa11.78□□□□□ -0.52
COL20A1-203ENST00000422202 LINC00869P0C866 280 aa11.78□□□□□ -0.52
COL20A1-203ENST00000422202 MC5RP33032 325 aa11.78□□□□□ -0.52
COL20A1-203ENST00000422202 MRGPRGQ86SM5 289 aa11.78□□□□□ -0.52
COL20A1-203ENST00000422202 ELOA3CA0A087WX78 387 aaPredicted RBP11.78□□□□□ -0.52
COL20A1-203ENST00000422202 PRR32B1ATL7 298 aa11.78□□□□□ -0.52
COL20A1-203ENST00000422202 CXCL10P02778 98 aa11.78□□□□□ -0.52
COL20A1-203ENST00000422202 EWSR1Q01844 656 aaKnown RBP eCLIP11.78□□□□□ -0.52
COL20A1-203ENST00000422202 HIST1H1AQ02539 215 aaPredicted RBP11.78□□□□□ -0.52
COL20A1-203ENST00000422202 LINC00470Q9BZP3 86 aa11.78□□□□□ -0.52
COL20A1-203ENST00000422202 RAB33BQ9H082 229 aa11.78□□□□□ -0.52
COL20A1-203ENST00000422202 FLRT3Q9NZU0 649 aa11.78□□□□□ -0.52
COL20A1-203ENST00000422202 PPIAL4CA0A0B4J2A2 164 aa11.77□□□□□ -0.52
COL20A1-203ENST00000422202 KLK8O60259 260 aa11.77□□□□□ -0.52
COL20A1-203ENST00000422202 HBZP02008 142 aa11.77□□□□□ -0.52
COL20A1-203ENST00000422202 PPIAL4GP0DN37 164 aa11.77□□□□□ -0.52
COL20A1-203ENST00000422202 ABLIM2Q6H8Q1 611 aa11.77□□□□□ -0.52
COL20A1-203ENST00000422202 PHLDA1Q8WV24 401 aaPredicted RBP11.77□□□□□ -0.52
COL20A1-203ENST00000422202 BCORQ6W2J9 1755 aa11.77□□□□□ -0.52
COL20A1-203ENST00000422202 TRBV5-4A0A0C4DH59 114 aa11.77□□□□□ -0.52
COL20A1-203ENST00000422202 IL4P05112 153 aa11.77□□□□□ -0.52
COL20A1-203ENST00000422202 TMEM170BQ5T4T1 132 aa11.77□□□□□ -0.52
COL20A1-203ENST00000422202 TMEM160Q9NX00 188 aa11.77□□□□□ -0.52
COL20A1-203ENST00000422202 MGAT2Q10469 447 aa11.77□□□□□ -0.53
COL20A1-203ENST00000422202 C12orf73Q69YU5 71 aa11.77□□□□□ -0.53
COL20A1-203ENST00000422202 RBBP6Q7Z6E9 1792 aaKnown RBP11.77□□□□□ -0.53
COL20A1-203ENST00000422202 TCF20Q9UGU0 1960 aaKnown RBP11.77□□□□□ -0.53
COL20A1-203ENST00000422202 RPL36A-HNRNPH2H7BZ11 118 aa11.77□□□□□ -0.53
COL20A1-203ENST00000422202 ISG15P05161 165 aa11.77□□□□□ -0.53
COL20A1-203ENST00000422202 PGPA6NDG6 321 aa11.77□□□□□ -0.53
COL20A1-203ENST00000422202 HPRT1P00492 218 aa11.77□□□□□ -0.53
COL20A1-203ENST00000422202 TRBV7-9A0A0J9YWB2 115 aa11.76□□□□□ -0.53
COL20A1-203ENST00000422202 FAM74A7A6NL05 159 aa11.76□□□□□ -0.53
COL20A1-203ENST00000422202 RPL8P62917 257 aaKnown RBP11.76□□□□□ -0.53
COL20A1-203ENST00000422202 ZBTB34Q8NCN2 500 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms