RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 ZNF787Q6DD87 383 aa9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 BTNL3Q6UXE8 466 aa9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 FAM24BQ8N5W8 94 aa9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 RFESDQ8TAC1 157 aa9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 EDARADDQ8WWZ3 215 aa9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 LOC102723971A0A1B0GUV8 181 aa9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 A0A1W2PPE2 198 aa9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 SRRM5B3KS81 715 aa9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 ZNF737O75373 536 aa9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 IFNA4P05014 189 aa9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 RAB5AP20339 215 aa9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 CFHR2P36980 270 aa9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 BRWD1-AS2P59051 145 aa9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 EDDM3AQ14507 147 aa9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 H2BFWTQ7Z2G1 175 aa9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 ZNF429Q86V71 674 aa9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 CYB561D1Q8N8Q1 229 aa9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 OR10G4Q8NGN3 311 aa9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 TAF15Q92804 592 aaKnown RBP eCLIP9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 SEBOXQ9HB31 216 aaPredicted RBP9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 GNG13Q9P2W3 67 aa9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 KIAA2026Q5HYC2 2103 aa9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 CACNA1GO43497 2377 aa9.59□□□□□ -0.88
TRAFD1-202ENST00000412615 CACNA1HO95180 2353 aa9.59□□□□□ -0.88
TRAFD1-202ENST00000412615 IGHV3-43A0A0B4J1X8 118 aa9.59□□□□□ -0.88
TRAFD1-202ENST00000412615 C15orf65H3BRN8 121 aa9.59□□□□□ -0.88
TRAFD1-202ENST00000412615 OR2C1O95371 312 aa9.59□□□□□ -0.88
TRAFD1-202ENST00000412615 CRYAAP02489 173 aa9.59□□□□□ -0.88
TRAFD1-202ENST00000412615 IGHV3-43DP0DP04 118 aa9.59□□□□□ -0.88
TRAFD1-202ENST00000412615 AGAP20933 346 aa9.59□□□□□ -0.88
TRAFD1-202ENST00000412615 ZNF83P51522 516 aa9.59□□□□□ -0.88
TRAFD1-202ENST00000412615 TMEM41BQ5BJD5 291 aa9.59□□□□□ -0.88
TRAFD1-202ENST00000412615 OR8G2PQ6IF36 304 aa9.59□□□□□ -0.88
TRAFD1-202ENST00000412615 RAB39BQ96DA2 213 aa9.59□□□□□ -0.88
TRAFD1-202ENST00000412615 CIB3Q96Q77 187 aaPredicted RBP9.59□□□□□ -0.88
TRAFD1-202ENST00000412615 NIPSNAP3BQ9BS92 247 aa9.59□□□□□ -0.88
TRAFD1-202ENST00000412615 PSG11Q9UQ72 335 aa9.59□□□□□ -0.88
TRAFD1-202ENST00000412615 TIMM9Q9Y5J7 89 aa9.59□□□□□ -0.88
TRAFD1-202ENST00000412615 UBE2L5PA0A1B0GUS4 154 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 M0R1B8 84 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 IGHV3-13P01766 116 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 FBP1P09467 338 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 EGR1P18146 543 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 TAGLN2P37802 199 aaKnown RBP9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 RPS23P62266 143 aaKnown RBP9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 LCN15Q6UWW0 184 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 TVP23CQ96ET8 276 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 SNX22Q96L94 193 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 AGMATQ9BSE5 352 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 VSIRQ9H7M9 311 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 CISD1Q9NZ45 108 aaKnown RBP9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 OTOGLQ3ZCN5 2332 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 DEFB108AA8MXU0 73 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 MGST3O14880 152 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 ST8SIA5O15466 376 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 S100A6P06703 90 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 MAS1LP35410 378 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 GLRXP35754 106 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 ZNF726P1Q15940 193 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 Q3ZCU0 254 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 ZNF474Q6S9Z5 364 aaPredicted RBP9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 Q6ZS92 163 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 SLC35E3Q7Z769 313 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 CENPVQ7Z7K6 275 aaPredicted RBP9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 LRP11Q86VZ4 500 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 DTD1Q8TEA8 209 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 FAM216AQ8WUB2 273 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 S100PBPQ96BU1 408 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 MUCL1Q96DR8 90 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 MALSU1Q96EH3 234 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 RCC1LQ96I51 464 aaKnown RBP9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 MRPL37Q9BZE1 423 aaKnown RBP9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 CLN8Q9UBY8 286 aa9.58□□□□□ -0.88
TRAFD1-202ENST00000412615 FRYQ5TBA9 3013 aa9.57□□□□□ -0.88
TRAFD1-202ENST00000412615 IGKV1D-17A0A075B6S4 117 aa9.57□□□□□ -0.88
TRAFD1-202ENST00000412615 A0A087WWC5 75 aa9.57□□□□□ -0.88
TRAFD1-202ENST00000412615 ZFP92A6NM28 416 aa9.57□□□□□ -0.88
TRAFD1-202ENST00000412615 LINC00473A8K010 186 aa9.57□□□□□ -0.88
TRAFD1-202ENST00000412615 PRSS47A8MTI9 375 aa9.57□□□□□ -0.88
TRAFD1-202ENST00000412615 RBMXL2O75526 392 aaKnown RBP9.57□□□□□ -0.88
TRAFD1-202ENST00000412615 BCL2P10415 239 aa9.57□□□□□ -0.88
TRAFD1-202ENST00000412615 GPR12P47775 334 aa9.57□□□□□ -0.88
TRAFD1-202ENST00000412615 CR1LQ2VPA4 569 aa9.57□□□□□ -0.88
TRAFD1-202ENST00000412615 C3orf36Q3SXR2 165 aa9.57□□□□□ -0.88
TRAFD1-202ENST00000412615 ADAM5Q6NVV9 412 aa9.57□□□□□ -0.88
TRAFD1-202ENST00000412615 OR10P1Q8NGE3 313 aa9.57□□□□□ -0.88
TRAFD1-202ENST00000412615 DCTN5Q9BTE1 182 aa9.57□□□□□ -0.88
TRAFD1-202ENST00000412615 TMEM147Q9BVK8 224 aa9.57□□□□□ -0.88
TRAFD1-202ENST00000412615 GNG12Q9UBI6 72 aa9.57□□□□□ -0.88
TRAFD1-202ENST00000412615 JPT1Q9UK76 154 aa9.57□□□□□ -0.88
TRAFD1-202ENST00000412615 KLF3P57682 345 aaPredicted RBP9.57□□□□□ -0.88
TRAFD1-202ENST00000412615 DLK1P80370 383 aa9.57□□□□□ -0.88
TRAFD1-202ENST00000412615 MSMPQ1L6U9 139 aa9.57□□□□□ -0.88
TRAFD1-202ENST00000412615 GCSAMQ8N6F7 178 aa9.57□□□□□ -0.88
TRAFD1-202ENST00000412615 OR2V2Q96R30 315 aa9.57□□□□□ -0.88
TRAFD1-202ENST00000412615 P2RX4Q99571 388 aa9.57□□□□□ -0.88
TRAFD1-202ENST00000412615 ZNF665Q9H7R5 613 aa9.57□□□□□ -0.88
TRAFD1-202ENST00000412615 FAM215AQ9Y5M1 114 aa9.57□□□□□ -0.88
TRAFD1-202ENST00000412615 GTF3C1Q12789 2109 aa9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 hCG_1809904A0A1W2PP81 198 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms