RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 H3BSA7 217 aa2.99□□□□□ -1.93
BRCA1-204ENST00000412061 CDRT1O95170 752 aa2.99□□□□□ -1.93
BRCA1-204ENST00000412061 IGHMP01871 453 aa2.99□□□□□ -1.93
BRCA1-204ENST00000412061 PFN1P07737 140 aaKnown RBP2.99□□□□□ -1.93
BRCA1-204ENST00000412061 CD34P28906 385 aa2.99□□□□□ -1.93
BRCA1-204ENST00000412061 MNAT1P51948 309 aa2.99□□□□□ -1.93
BRCA1-204ENST00000412061 ZNF133P52736 654 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-204ENST00000412061 TCTAP57738 103 aa2.99□□□□□ -1.93
BRCA1-204ENST00000412061 KRTAP10-5P60370 271 aa2.99□□□□□ -1.93
BRCA1-204ENST00000412061 FABP9Q0Z7S8 132 aa2.99□□□□□ -1.93
BRCA1-204ENST00000412061 ZNF678Q5SXM1 525 aa2.99□□□□□ -1.93
BRCA1-204ENST00000412061 TMPPEQ6ZT21 453 aa2.99□□□□□ -1.93
BRCA1-204ENST00000412061 WDR86Q86TI4 376 aa2.99□□□□□ -1.93
BRCA1-204ENST00000412061 OOSP2Q86WS3 158 aa2.99□□□□□ -1.93
BRCA1-204ENST00000412061 BAP18Q8IXM2 172 aa2.99□□□□□ -1.93
BRCA1-204ENST00000412061 Q8N7P7 452 aa2.99□□□□□ -1.93
BRCA1-204ENST00000412061 OR4A5Q8NH83 315 aa2.99□□□□□ -1.93
BRCA1-204ENST00000412061 LINC01560Q8TB33 94 aa2.99□□□□□ -1.93
BRCA1-204ENST00000412061 ITLN2Q8WWU7 325 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-204ENST00000412061 GINS3Q9BRX5 216 aa2.99□□□□□ -1.93
BRCA1-204ENST00000412061 TSSK6Q9BXA6 273 aa2.99□□□□□ -1.93
BRCA1-204ENST00000412061 ALX4Q9H161 411 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-204ENST00000412061 RNASE7Q9H1E1 156 aaKnown RBP2.99□□□□□ -1.93
BRCA1-204ENST00000412061 CXorf21Q9HAI6 301 aa2.99□□□□□ -1.93
BRCA1-204ENST00000412061 ZNF355PQ9NSJ1 428 aa2.99□□□□□ -1.93
BRCA1-204ENST00000412061 DHCR7Q9UBM7 475 aaKnown RBP2.99□□□□□ -1.93
BRCA1-204ENST00000412061 SS18L2Q9UHA2 77 aa2.99□□□□□ -1.93
BRCA1-204ENST00000412061 RWDD2AQ9UIY3 292 aa2.99□□□□□ -1.93
BRCA1-204ENST00000412061 ANGPT4Q9Y264 503 aa2.99□□□□□ -1.93
BRCA1-204ENST00000412061 KIF25-AS1Q9Y6Z4 181 aa2.99□□□□□ -1.93
BRCA1-204ENST00000412061 HECW2Q9P2P5 1572 aa2.99□□□□□ -1.93
BRCA1-204ENST00000412061 CHD5Q8TDI0 1954 aa2.99□□□□□ -1.93
BRCA1-204ENST00000412061 OR4C45A6NMZ5 311 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 KNCNA6PVL3 124 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 TMX2-CTNND1H3BSU7 103 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 ZNF207O43670 478 aaKnown RBP2.98□□□□□ -1.93
BRCA1-204ENST00000412061 OPN1SWP03999 348 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 HLA-DQB2P05538 268 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 CRHP06850 196 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 IL1RNP18510 177 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 OR10J1P30954 320 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 MPIP34949 423 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 OPRK1P41145 380 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 SNRPD2P62316 118 aaKnown RBP2.98□□□□□ -1.93
BRCA1-204ENST00000412061 IL15RAQ13261 267 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 BTN1A1Q13410 526 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 KCNJ8Q15842 424 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 IAH1Q2TAA2 248 aaPredicted RBP2.98□□□□□ -1.93
BRCA1-204ENST00000412061 SP6Q3SY56 376 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 RNF212Q495C1 297 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 CYB5R2Q6BCY4 276 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 TIFABQ6ZNK6 161 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 DAZ4Q86SG3 579 aaKnown RBP2.98□□□□□ -1.93
BRCA1-204ENST00000412061 C1orf174Q8IYL3 243 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 OR8B12Q8NGG6 310 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 OR10K1Q8NGX5 313 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 SLC25A46Q96AG3 418 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 TBX5Q99593 518 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 SHANK2-AS3Q9BTD1 123 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 PLA2G12AQ9BZM1 189 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 DAZ1Q9NQZ3 744 aaKnown RBP2.98□□□□□ -1.93
BRCA1-204ENST00000412061 UQCC1Q9NVA1 299 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 RSL24D1Q9UHA3 163 aaKnown RBP2.98□□□□□ -1.93
BRCA1-204ENST00000412061 ZNF230Q9UIE0 474 aaPredicted RBP2.98□□□□□ -1.93
BRCA1-204ENST00000412061 COQ4Q9Y3A0 265 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 ZNF318Q5VUA4 2279 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 ARHGAP21Q5T5U3 1957 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 DOCK5Q9H7D0 1870 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 MYH3P11055 1940 aa2.98□□□□□ -1.93
BRCA1-204ENST00000412061 NUP214P35658 2090 aaPredicted RBP2.97□□□□□ -1.93
BRCA1-204ENST00000412061 A0A096LNJ9 63 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 TRAV26-2A0A0B4J265 109 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 IGHV1-3A0A0C4DH29 117 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 OR11H12B2RN74 326 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 GPR31O00270 319 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 FSTL3O95633 263 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 MT-CO2P00403 227 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 IGLV3-27P01718 113 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 C1GALT1C1LP0DN25 315 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 IDO1P14902 403 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 CDK2P24941 298 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 ALDH3A1P30838 453 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 CA7P43166 264 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 DAPP51397 102 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 PDGFRLQ15198 375 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 MMDQ15546 238 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 UMODL1-AS1Q8N2C9 162 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 ANKRD29Q8N6D5 301 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 KRTCAP2Q8N6L1 136 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 OR11H1Q8NG94 326 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 OR11H2Q8NH07 326 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 OR52N1Q8NH53 320 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 MS4A6EQ96DS6 147 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 CNBD2Q96M20 576 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 TRIB3Q96RU7 358 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 NDFIP1Q9BT67 221 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 PLA2G2FQ9BZM2 168 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 MIXL1Q9H2W2 232 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 LHX9Q9NQ69 397 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 CISHQ9NSE2 258 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms