RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 NUP54Q7Z3B4 507 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 KMT5CQ86Y97 462 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 FBXL14Q8N1E6 418 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 CSNK2A3Q8NEV1 391 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 OR5AU1Q8NGC0 362 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 OR51A4Q8NGJ6 313 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 OR4D5Q8NGN0 318 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 OR10S1Q8NGN2 331 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 OR13G1Q8NGZ3 307 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 OR10AC1Q8NH08 325 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 PRSS3P2Q8NHM4 247 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 LIPHQ8WWY8 451 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 TMEM37Q8WXS4 190 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 SLAMF6Q96DU3 332 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 GMPPAQ96IJ6 420 aaPredicted RBP4.63□□□□□ -1.67
CLK1-202ENST00000409403 LMF2Q9BU23 707 aaKnown RBP4.63□□□□□ -1.67
CLK1-202ENST00000409403 CST9LQ9H4G1 147 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 MOB1AQ9H8S9 216 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 ELOVL3Q9HB03 270 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 IL19Q9UHD0 177 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 LSM7Q9UK45 103 aaKnown RBP4.63□□□□□ -1.67
CLK1-202ENST00000409403 KLHDC2Q9Y2U9 406 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 PAM16Q9Y3D7 125 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 MRPS18BQ9Y676 258 aaKnown RBP4.63□□□□□ -1.67
CLK1-202ENST00000409403 R4GMQ9 66 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 CCDC168Q8NDH2 2452 aa4.63□□□□□ -1.67
CLK1-202ENST00000409403 MDC1Q14676 2089 aaKnown RBP4.63□□□□□ -1.67
CLK1-202ENST00000409403 A0A1B0GV50 99 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 ZNF840PA6NDX5 716 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 OR5B21A6NL26 309 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 SERPINE3A8MV23 424 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 TMEM14DPA8MWL7 114 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 NPIPB11E5RHQ5 1161 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 J3QR06 171 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 IFNL4K9M1U5 179 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 CDIPTO14735 213 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 COCHO43405 550 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 ERI3O43414 337 aaKnown RBP4.62□□□□□ -1.67
CLK1-202ENST00000409403 FGF17O60258 216 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 YPEL1O60688 119 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 NDUFB8O95169 186 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 OR6A2O95222 327 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 IFNA5P01569 189 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 CELA2AP08217 269 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 GNB3P16520 340 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 SRD5A1P18405 259 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 ZNF10P21506 573 aaPredicted RBP4.62□□□□□ -1.67
CLK1-202ENST00000409403 PTGER4P35408 488 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 TFPI2P48307 235 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 TAS2R30P59541 319 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 PPP1CBP62140 327 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 CSNK1G2P78368 415 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 CCL20P78556 96 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 ARFRP1Q13795 201 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 VAMP3Q15836 100 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 ZIC1Q15915 447 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 PSG3Q16557 428 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 ABCA11PQ4W5N1 156 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 LCN10Q6JVE6 187 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 ERN2Q76MJ5 926 aaKnown RBP4.62□□□□□ -1.67
CLK1-202ENST00000409403 LHFPL4Q7Z7J7 247 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 C1orf174Q8IYL3 243 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 CCDC71LQ8N9Z2 235 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 SSC4DQ8WTU2 575 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 TMEM234Q8WY98 164 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 APH1AQ96BI3 265 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 PINX1Q96BK5 328 aaKnown RBP4.62□□□□□ -1.67
CLK1-202ENST00000409403 LMLNQ96KR4 655 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 ZNF681Q96N22 645 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 YPEL2Q96QA6 119 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 SMIM7Q9BQ49 75 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 ULBP3Q9BZM4 244 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 LPAR5Q9H1C0 372 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 ZDHHC6Q9H6R6 413 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 TUBG2Q9NRH3 451 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 GNG13Q9P2W3 67 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 HS3ST2Q9Y278 367 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 PTRH2Q9Y3E5 179 aaKnown RBP4.62□□□□□ -1.67
CLK1-202ENST00000409403 TRAPPC1Q9Y5R8 145 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 RP1L1Q8IWN7 2480 aaPredicted RBP4.62□□□□□ -1.67
CLK1-202ENST00000409403 DENND4CQ5VZ89 1909 aa4.62□□□□□ -1.67
CLK1-202ENST00000409403 LOC107986453A0A1B0GWG9 222 aa4.61□□□□□ -1.67
CLK1-202ENST00000409403 A0A1W2PQF6 199 aa4.61□□□□□ -1.67
CLK1-202ENST00000409403 ZNF814B7Z6K7 855 aa4.61□□□□□ -1.67
CLK1-202ENST00000409403 NPIPA7E9PJI5 369 aa4.61□□□□□ -1.67
CLK1-202ENST00000409403 TRAF3IP2O43734 574 aaPredicted RBP4.61□□□□□ -1.67
CLK1-202ENST00000409403 RAMP3O60896 148 aa4.61□□□□□ -1.67
CLK1-202ENST00000409403 KLKB1P03952 638 aa4.61□□□□□ -1.67
CLK1-202ENST00000409403 H2BFMP0C1H6 154 aa4.61□□□□□ -1.67
CLK1-202ENST00000409403 NPIPA8P0DM63 369 aa4.61□□□□□ -1.67
CLK1-202ENST00000409403 CAPZBP47756 277 aa4.61□□□□□ -1.67
CLK1-202ENST00000409403 UQCRFS1P47985 274 aa4.61□□□□□ -1.67
CLK1-202ENST00000409403 THBS3P49746 956 aa4.61□□□□□ -1.67
CLK1-202ENST00000409403 FGF8P55075 233 aaPredicted RBP4.61□□□□□ -1.67
CLK1-202ENST00000409403 ERVS71-1P61550 626 aa4.61□□□□□ -1.67
CLK1-202ENST00000409403 QRFPP83859 136 aa4.61□□□□□ -1.67
CLK1-202ENST00000409403 ZFP36L1Q07352 338 aaKnown RBP4.61□□□□□ -1.67
CLK1-202ENST00000409403 PMCHL1Q16048 86 aa4.61□□□□□ -1.67
CLK1-202ENST00000409403 MEP1BQ16820 701 aa4.61□□□□□ -1.67
CLK1-202ENST00000409403 PLPPR5Q32ZL2 321 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms