RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 FER1L6-AS2Q96M78 137 aa10.7□□□□□ -0.7
PPP4R1-202ENST00000400555 H7BYZ3 331 aa10.7□□□□□ -0.7
PPP4R1-202ENST00000400555 UBE2CO00762 179 aa10.7□□□□□ -0.7
PPP4R1-202ENST00000400555 HBZP02008 142 aa10.7□□□□□ -0.7
PPP4R1-202ENST00000400555 CYC1P08574 325 aa10.7□□□□□ -0.7
PPP4R1-202ENST00000400555 PSMB3P49720 205 aa10.7□□□□□ -0.7
PPP4R1-202ENST00000400555 OR51I2Q9H344 312 aa10.7□□□□□ -0.7
PPP4R1-202ENST00000400555 METTL1Q9UBP6 276 aaKnown RBP10.7□□□□□ -0.7
PPP4R1-202ENST00000400555 SH3BGRL2Q9UJC5 107 aa10.7□□□□□ -0.7
PPP4R1-202ENST00000400555 COL4A2P08572 1712 aa10.7□□□□□ -0.7
PPP4R1-202ENST00000400555 A0A1W2PPV4 95 aa10.69□□□□□ -0.7
PPP4R1-202ENST00000400555 RPL30P62888 115 aaKnown RBP10.69□□□□□ -0.7
PPP4R1-202ENST00000400555 WDR86Q86TI4 376 aa10.69□□□□□ -0.7
PPP4R1-202ENST00000400555 LYPD6BQ8NI32 183 aa10.69□□□□□ -0.7
PPP4R1-202ENST00000400555 METRNQ9UJH8 293 aa10.69□□□□□ -0.7
PPP4R1-202ENST00000400555 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.69□□□□□ -0.7
PPP4R1-202ENST00000400555 A0A1W2PNU3 283 aaPredicted RBP10.69□□□□□ -0.7
PPP4R1-202ENST00000400555 TFF3Q07654 80 aa10.69□□□□□ -0.7
PPP4R1-202ENST00000400555 CATR1Q13166 79 aa10.69□□□□□ -0.7
PPP4R1-202ENST00000400555 KHDC3LQ587J8 217 aa10.69□□□□□ -0.7
PPP4R1-202ENST00000400555 GCSAMLQ5JQS6 135 aa10.69□□□□□ -0.7
PPP4R1-202ENST00000400555 FAM201AQ5SY85 155 aa10.69□□□□□ -0.7
PPP4R1-202ENST00000400555 ODF3L1Q8IXM7 274 aa10.69□□□□□ -0.7
PPP4R1-202ENST00000400555 ZNF525Q8N782 197 aa10.69□□□□□ -0.7
PPP4R1-202ENST00000400555 TMEM45BQ96B21 275 aa10.69□□□□□ -0.7
PPP4R1-202ENST00000400555 SPRR3Q9UBC9 169 aa10.69□□□□□ -0.7
PPP4R1-202ENST00000400555 C12orf77C9JDV5 145 aa10.69□□□□□ -0.7
PPP4R1-202ENST00000400555 HSPB1P04792 205 aaKnown RBP10.69□□□□□ -0.7
PPP4R1-202ENST00000400555 PRAMEF5Q5TYX0 476 aa10.69□□□□□ -0.7
PPP4R1-202ENST00000400555 TAF15Q92804 592 aaKnown RBP eCLIP10.69□□□□□ -0.7
PPP4R1-202ENST00000400555 RNF115Q9Y4L5 304 aa10.69□□□□□ -0.7
PPP4R1-202ENST00000400555 KLF2Q9Y5W3 355 aaPredicted RBP10.69□□□□□ -0.7
PPP4R1-202ENST00000400555 TRAV38-1A0A0B4J264 116 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 TMEM30CPA0ZSE6 113 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 HIST1H2BKO60814 126 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 HIST1H2BJP06899 126 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 HIST1H2BOP23527 126 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 HIST1H2BBP33778 126 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 UCP2P55851 309 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 HIST1H2BDP58876 126 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 HIST1H2BCP62807 126 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 HIST2H2BEQ16778 126 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 KLF14Q8TD94 323 aaPredicted RBP10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 HIST1H2BHQ93079 126 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 HIST1H2BNQ99877 126 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 HIST1H2BMQ99879 126 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 LOC102723971A0A1B0GUV8 181 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 SNRPCP09234 159 aaKnown RBP10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 FAM3BP58499 235 aaPredicted RBP10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 DEFA6Q01524 100 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 ZNF585BQ52M93 769 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 ZNF506Q5JVG8 444 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 ZNF66Q6ZN08 573 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 FAM90A10PA6NDY2 464 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 FAM90A18PA6NE21 464 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 FAM90A16PA6NEW6 464 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 FAM90A20PA6NIJ5 464 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 FAM90A8PA6NJQ4 464 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 FAM90A7PA6NKC0 464 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 FAM90A22PA8MWA6 464 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 FAM90A12PA8MX19 464 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 FAM90A5PA8MXJ8 464 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 FAM90A23PA8MXZ1 464 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 M0R1X1 148 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 FAM90A15PP0C7V4 464 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 FAM90A13PP0C7W8 464 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 FAM90A14PP0C7W9 464 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 FAM90A24PP0C7X0 464 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 VWA1Q6PCB0 445 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 DTD1Q8TEA8 209 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 SSMEM1Q8WWF3 244 aa10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 BCL2L2Q92843 193 aaPredicted RBP10.68□□□□□ -0.7
PPP4R1-202ENST00000400555 SPRY3O43610 288 aa10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 SLC25A6P12236 298 aa10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 ZNF83P51522 516 aa10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 Q6ZSR3 168 aa10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 C16orf82Q7Z2V1 217 aa10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 OR51G1Q8NGK1 321 aa10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 OR13D1Q8NGV5 346 aa10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 LRRC29Q8WV35 223 aa10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 LINC00470Q9BZP3 86 aa10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 IGKV3D-15A0A087WSY6 115 aa10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 CXorf65A6NEN9 183 aa10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 PGPEP1LA6NFU8 196 aa10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 COL10A1Q03692 680 aa10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 TNFRSF9Q07011 255 aa10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 ZNF726P1Q15940 193 aa10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 TMEM241Q24JQ0 296 aa10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 PDLIM3Q53GG5 364 aaPredicted RBP10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 PYY3Q5JQD4 70 aa10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 HAPLN4Q86UW8 402 aa10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 ELOVL1Q9BW60 279 aa10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 YLPM1P49750 1951 aaKnown RBP10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 ODAMA1E959 279 aa10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 RNF212BA8MTL3 300 aa10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 SOD3P08294 240 aa10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 ACP1P24666 158 aa10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 GPR12P47775 334 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms