RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 CKS2P33552 79 aa11.87□□□□□ -0.51
VAPA-202ENST00000400000 DLX6P56179 175 aa11.87□□□□□ -0.51
VAPA-202ENST00000400000 WDR25Q64LD2 544 aaPredicted RBP11.87□□□□□ -0.51
VAPA-202ENST00000400000 ZNF343Q6P1L6 599 aa11.87□□□□□ -0.51
VAPA-202ENST00000400000 KCNK17Q96T54 332 aa11.87□□□□□ -0.51
VAPA-202ENST00000400000 PILRBQ9UKJ0 227 aa11.87□□□□□ -0.51
VAPA-202ENST00000400000 AMY1AP04745 511 aa11.87□□□□□ -0.51
VAPA-202ENST00000400000 GPR61Q9BZJ8 451 aa11.87□□□□□ -0.51
VAPA-202ENST00000400000 CALYQ9NYX4 217 aa11.87□□□□□ -0.51
VAPA-202ENST00000400000 SHANK3Q9BYB0 1731 aa11.87□□□□□ -0.51
VAPA-202ENST00000400000 GCGP01275 180 aa11.87□□□□□ -0.51
VAPA-202ENST00000400000 ATP6V0CP27449 155 aa11.87□□□□□ -0.51
VAPA-202ENST00000400000 ATP5G2Q06055 141 aa11.87□□□□□ -0.51
VAPA-202ENST00000400000 BPIFA4PQ86YQ2 179 aa11.87□□□□□ -0.51
VAPA-202ENST00000400000 ABHD12Q8N2K0 398 aa11.87□□□□□ -0.51
VAPA-202ENST00000400000 ANAPC16Q96DE5 110 aa11.87□□□□□ -0.51
VAPA-202ENST00000400000 OR5AC2Q9NZP5 309 aa11.87□□□□□ -0.51
VAPA-202ENST00000400000 CBY1Q9Y3M2 126 aa11.87□□□□□ -0.51
VAPA-202ENST00000400000 ABCA3Q99758 1704 aa11.87□□□□□ -0.51
VAPA-202ENST00000400000 GPX1P07203 203 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 MBNL2Q5VZF2 373 aaKnown RBP11.86□□□□□ -0.51
VAPA-202ENST00000400000 ATOH7Q8N100 152 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 MIXL1Q9H2W2 232 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 HSPB7Q9UBY9 170 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 CCL27Q9Y4X3 112 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 ZFC3H1O60293 1989 aaKnown RBP11.86□□□□□ -0.51
VAPA-202ENST00000400000 CA2P00918 260 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 CRHP06850 196 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 MEIG1Q5JSS6 88 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 C1QL1O75973 258 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 MOSP00540 346 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 RND2P52198 227 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 AMELYQ99218 206 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 NUDT16L1Q9BRJ7 211 aaKnown RBP11.86□□□□□ -0.51
VAPA-202ENST00000400000 SIRT4Q9Y6E7 314 aaPredicted RBP11.86□□□□□ -0.51
VAPA-202ENST00000400000 TMEM56-RWDD3S4R434 201 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 KIAA1551Q9HCM1 1747 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 A0A0B4J293 547 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 ISLRO14498 428 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 WNT9BO14905 357 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 TIAF1O95411 115 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 CRYBA2P53672 197 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 PQLC2Q6ZP29 291 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 SYT8Q8NBV8 401 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 MRPL30Q8TCC3 161 aaKnown RBP11.86□□□□□ -0.51
VAPA-202ENST00000400000 CHST5Q9GZS9 411 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 TBL2Q9Y4P3 447 aaKnown RBP11.86□□□□□ -0.51
VAPA-202ENST00000400000 A0A087X0M5 115 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 A0A1B0GX30 115 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 KLK2P20151 261 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 DCAF12L2Q5VW00 463 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 SLC25A42Q86VD7 318 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 ZNF318Q5VUA4 2279 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 C7orf71A4D174 169 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 ISG15P05161 165 aa11.86□□□□□ -0.51
VAPA-202ENST00000400000 KBTBD11O94819 623 aa11.85□□□□□ -0.51
VAPA-202ENST00000400000 KIAA1644Q3SXP7 199 aa11.85□□□□□ -0.51
VAPA-202ENST00000400000 COL22A1Q8NFW1 1626 aaPredicted RBP11.85□□□□□ -0.51
VAPA-202ENST00000400000 OR4C45A6NMZ5 311 aa11.85□□□□□ -0.51
VAPA-202ENST00000400000 PRSS23O95084 383 aa11.85□□□□□ -0.51
VAPA-202ENST00000400000 CTSSP25774 331 aa11.85□□□□□ -0.51
VAPA-202ENST00000400000 NPBWR2P48146 333 aa11.85□□□□□ -0.51
VAPA-202ENST00000400000 FAM27E3Q08E93 113 aa11.85□□□□□ -0.51
VAPA-202ENST00000400000 NHSL1Q5SYE7 1610 aa11.85□□□□□ -0.51
VAPA-202ENST00000400000 IGKV1-8A0A0C4DH67 115 aa11.85□□□□□ -0.51
VAPA-202ENST00000400000 LNP1A1A4G5 178 aa11.85□□□□□ -0.51
VAPA-202ENST00000400000 CEACAM21Q3KPI0 293 aa11.85□□□□□ -0.51
VAPA-202ENST00000400000 GLMPQ8WWB7 406 aa11.85□□□□□ -0.51
VAPA-202ENST00000400000 V9GYH0 126 aa11.85□□□□□ -0.51
VAPA-202ENST00000400000 FOXI3A8MTJ6 420 aaPredicted RBP11.85□□□□□ -0.51
VAPA-202ENST00000400000 GLIPR1P48060 266 aa11.85□□□□□ -0.51
VAPA-202ENST00000400000 CACNG7P62955 275 aa11.85□□□□□ -0.51
VAPA-202ENST00000400000 HIST1H1AQ02539 215 aaPredicted RBP11.85□□□□□ -0.51
VAPA-202ENST00000400000 CXorf66Q5JRM2 361 aaPredicted RBP11.85□□□□□ -0.51
VAPA-202ENST00000400000 MEGF10Q96KG7 1140 aa11.85□□□□□ -0.51
VAPA-202ENST00000400000 KCNK7Q9Y2U2 307 aa11.85□□□□□ -0.51
VAPA-202ENST00000400000 RNF115Q9Y4L5 304 aa11.85□□□□□ -0.51
VAPA-202ENST00000400000 MPDU1O75352 247 aa11.84□□□□□ -0.51
VAPA-202ENST00000400000 TGFAP01135 160 aa11.84□□□□□ -0.51
VAPA-202ENST00000400000 CELA3AP09093 270 aa11.84□□□□□ -0.51
VAPA-202ENST00000400000 CDKN1AP38936 164 aa11.84□□□□□ -0.51
VAPA-202ENST00000400000 MEOX2P50222 304 aa11.84□□□□□ -0.51
VAPA-202ENST00000400000 ZNF645Q8N7E2 425 aa11.84□□□□□ -0.51
VAPA-202ENST00000400000 ZNRF1Q8ND25 227 aa11.84□□□□□ -0.51
VAPA-202ENST00000400000 OR52M1Q8NGK5 317 aa11.84□□□□□ -0.51
VAPA-202ENST00000400000 WFDC6Q9BQY6 131 aa11.84□□□□□ -0.51
VAPA-202ENST00000400000 DICER1Q9UPY3 1922 aaKnown RBP11.84□□□□□ -0.51
VAPA-202ENST00000400000 CXorf51AA0A1B0GTR3 108 aa11.84□□□□□ -0.51
VAPA-202ENST00000400000 PDE6DO43924 150 aa11.84□□□□□ -0.51
VAPA-202ENST00000400000 MPV17P39210 176 aa11.84□□□□□ -0.51
VAPA-202ENST00000400000 UNC119Q13432 240 aa11.84□□□□□ -0.51
VAPA-202ENST00000400000 DEFB104AQ8WTQ1 72 aa11.84□□□□□ -0.51
VAPA-202ENST00000400000 ANOS1P23352 680 aa11.84□□□□□ -0.51
VAPA-202ENST00000400000 CYB561D1Q8N8Q1 229 aa11.84□□□□□ -0.51
VAPA-202ENST00000400000 RAX2Q96IS3 184 aa11.84□□□□□ -0.51
VAPA-202ENST00000400000 RNF133Q8WVZ7 376 aa11.84□□□□□ -0.51
VAPA-202ENST00000400000 TP53RKQ96S44 253 aa11.84□□□□□ -0.51
VAPA-202ENST00000400000 LYRM2Q9NU23 88 aaPredicted RBP11.84□□□□□ -0.51
VAPA-202ENST00000400000 FOCADQ5VW36 1801 aa11.84□□□□□ -0.51
VAPA-202ENST00000400000 DIRC3C9JPN6 131 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms