RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 PEX11BO96011 259 aa9.53□□□□□ -0.88
CACNA1C-216ENST00000399638 BGLAPP02818 100 aa9.53□□□□□ -0.88
CACNA1C-216ENST00000399638 CD3DP04234 171 aa9.53□□□□□ -0.88
CACNA1C-216ENST00000399638 ISG15P05161 165 aa9.53□□□□□ -0.88
CACNA1C-216ENST00000399638 GPX1P07203 203 aa9.53□□□□□ -0.88
CACNA1C-216ENST00000399638 RPL27AP46776 148 aaKnown RBP9.53□□□□□ -0.88
CACNA1C-216ENST00000399638 HCP5Q6MZN7 132 aa9.53□□□□□ -0.88
CACNA1C-216ENST00000399638 KLK11Q9UBX7 282 aa9.53□□□□□ -0.88
CACNA1C-216ENST00000399638 SELENOKQ9Y6D0 94 aa9.53□□□□□ -0.88
CACNA1C-216ENST00000399638 IGHV3-66A0A0C4DH42 116 aa9.53□□□□□ -0.88
CACNA1C-216ENST00000399638 CKS1BP61024 79 aa9.53□□□□□ -0.88
CACNA1C-216ENST00000399638 NHSL1Q5SYE7 1610 aa9.53□□□□□ -0.88
CACNA1C-216ENST00000399638 A0A1B0GTL3 188 aa9.53□□□□□ -0.88
CACNA1C-216ENST00000399638 ISLRO14498 428 aa9.53□□□□□ -0.88
CACNA1C-216ENST00000399638 GLDNQ6ZMI3 551 aaPredicted RBP9.53□□□□□ -0.88
CACNA1C-216ENST00000399638 LYG2Q86SG7 212 aa9.53□□□□□ -0.88
CACNA1C-216ENST00000399638 OR5A1Q8NGJ0 315 aa9.53□□□□□ -0.88
CACNA1C-216ENST00000399638 SSMEM1Q8WWF3 244 aa9.53□□□□□ -0.88
CACNA1C-216ENST00000399638 MRPS18AQ9NVS2 196 aaKnown RBP9.53□□□□□ -0.88
CACNA1C-216ENST00000399638 TMEM38BQ9NVV0 291 aa9.53□□□□□ -0.88
CACNA1C-216ENST00000399638 CDC42EP3Q9UKI2 254 aa9.53□□□□□ -0.88
CACNA1C-216ENST00000399638 SMIM6P0DI80 62 aa9.52□□□□□ -0.88
CACNA1C-216ENST00000399638 MAS1LP35410 378 aa9.52□□□□□ -0.88
CACNA1C-216ENST00000399638 FAM166AQ6J272 317 aa9.52□□□□□ -0.88
CACNA1C-216ENST00000399638 SCMH1Q96GD3 660 aa9.52□□□□□ -0.88
CACNA1C-216ENST00000399638 TMEM191AQ9H0A3 160 aa9.52□□□□□ -0.88
CACNA1C-216ENST00000399638 MDKP21741 143 aaPredicted RBP9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 IER3P46695 156 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 ZNF506Q5JVG8 444 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 SUMO4Q6EEV6 95 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 NEU4Q8WWR8 484 aaPredicted RBP9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 SIGLEC12Q96PQ1 595 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 TAF1P21675 1872 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 CEP250Q9BV73 2442 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 PSG5Q15238 335 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 GBGT1Q8N5D6 347 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 FAM24BQ8N5W8 94 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 SPAG17Q6Q759 2223 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 M0R143 59 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 SAP30O75446 220 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 TYMSP04818 313 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 RIGQ13278 110 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 COLCA1Q6ZS62 124 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 ATOH7Q8N100 152 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 TPRX1Q8N7U7 411 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 TMEM105Q8N8V8 129 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 ZNF383Q8NA42 475 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 NTNG2Q96CW9 530 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 C2orf50Q96LR7 162 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 TSPAN32Q96QS1 320 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 GPR27Q9NS67 375 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 KLK13Q9UKR3 277 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 PHLDA3Q9Y5J5 127 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 SYNGR3O43761 229 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 DHRS2Q13268 280 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 PRSS22Q9GZN4 317 aa9.52□□□□□ -0.89
CACNA1C-216ENST00000399638 TRDCB7Z8K6 153 aa9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 SYNGR1O43759 233 aa9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 HOXB1P14653 301 aaPredicted RBP9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 GZMMP51124 257 aa9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 TDGF1P3P51864 188 aa9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 HIST1H4AP62805 103 aaKnown RBP9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 BAP18Q8IXM2 172 aa9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 LRRC3BQ96PB8 259 aa9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 GEMIN7Q9H840 131 aaKnown RBP9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 ZNF638Q14966 1978 aaKnown RBP9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 RBFOX2O43251 390 aaKnown RBP eCLIP9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 NDUFA2O43678 99 aa9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 ZNF79Q15937 498 aa9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 SEC11CQ9BY50 192 aa9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 IGSF23A1L1A6 192 aa9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 C9JCJ5 164 aa9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 PDCD6O75340 191 aa9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 ZNF253O75346 499 aa9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 OR13A1Q8NGR1 328 aa9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 DEFB104AQ8WTQ1 72 aa9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 ZG16BQ96DA0 208 aa9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 MRPL20Q9BYC9 149 aaKnown RBP9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 CRIM1Q9NZV1 1036 aa9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 C1orf122Q6ZSJ8 110 aa9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 OR8D4Q8NGM9 314 aa9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 ERVH48-1M5A8F1 160 aa9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 PLA2G10O15496 165 aa9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 CGB3P0DN86 165 aa9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 ABHD12Q8N2K0 398 aa9.51□□□□□ -0.89
CACNA1C-216ENST00000399638 PGPA6NDG6 321 aa9.5□□□□□ -0.89
CACNA1C-216ENST00000399638 CD69Q07108 199 aa9.5□□□□□ -0.89
CACNA1C-216ENST00000399638 CIRBPQ14011 172 aaKnown RBP9.5□□□□□ -0.89
CACNA1C-216ENST00000399638 CFAP161Q6P656 301 aa9.5□□□□□ -0.89
CACNA1C-216ENST00000399638 SAP25Q8TEE9 199 aa9.5□□□□□ -0.89
CACNA1C-216ENST00000399638 ISG20L2Q9H9L3 353 aaKnown RBP9.5□□□□□ -0.89
CACNA1C-216ENST00000399638 MRPS16Q9Y3D3 137 aaKnown RBP9.5□□□□□ -0.89
CACNA1C-216ENST00000399638 IGHV3-35A0A0C4DH35 117 aa9.5□□□□□ -0.89
CACNA1C-216ENST00000399638 J3QR06 171 aa9.5□□□□□ -0.89
CACNA1C-216ENST00000399638 ADAP1O75689 374 aa9.5□□□□□ -0.89
CACNA1C-216ENST00000399638 CD37P11049 281 aa9.5□□□□□ -0.89
CACNA1C-216ENST00000399638 ERGP11308 486 aa9.5□□□□□ -0.89
CACNA1C-216ENST00000399638 HIST1H1AQ02539 215 aaPredicted RBP9.5□□□□□ -0.89
CACNA1C-216ENST00000399638 NFAM1Q8NET5 270 aaPredicted RBP9.5□□□□□ -0.89
CACNA1C-216ENST00000399638 A0A087X0M5 115 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms