RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 PLXNB1O43157 2135 aa12.21□□□□□ -0.46
SREBF1-205ENST00000395757 CDS2O95674 445 aa12.21□□□□□ -0.46
SREBF1-205ENST00000395757 TDGF1P13385 188 aa12.21□□□□□ -0.46
SREBF1-205ENST00000395757 EGR1P18146 543 aa12.21□□□□□ -0.46
SREBF1-205ENST00000395757 PRB3Q04118 309 aaPredicted RBP12.21□□□□□ -0.46
SREBF1-205ENST00000395757 DRAM1Q8N682 238 aa12.21□□□□□ -0.46
SREBF1-205ENST00000395757 SMIM8Q96KF7 97 aa12.21□□□□□ -0.46
SREBF1-205ENST00000395757 TUBD1Q9UJT1 453 aa12.21□□□□□ -0.46
SREBF1-205ENST00000395757 HBZP02008 142 aa12.2□□□□□ -0.46
SREBF1-205ENST00000395757 DANCRP0C864 163 aa12.2□□□□□ -0.46
SREBF1-205ENST00000395757 WT1P19544 449 aaPredicted RBP12.2□□□□□ -0.46
SREBF1-205ENST00000395757 S100A2P29034 98 aa12.2□□□□□ -0.46
SREBF1-205ENST00000395757 TNFSF10P50591 281 aa12.2□□□□□ -0.46
SREBF1-205ENST00000395757 RND3P61587 244 aa12.2□□□□□ -0.46
SREBF1-205ENST00000395757 COL10A1Q03692 680 aa12.2□□□□□ -0.46
SREBF1-205ENST00000395757 RHEBQ15382 184 aa12.2□□□□□ -0.46
SREBF1-205ENST00000395757 LRP11Q86VZ4 500 aa12.2□□□□□ -0.46
SREBF1-205ENST00000395757 SARAFQ96BY9 339 aa12.2□□□□□ -0.46
SREBF1-205ENST00000395757 PRO3102Q9H379 93 aa12.2□□□□□ -0.46
SREBF1-205ENST00000395757 TMPRSS5Q9H3S3 457 aa12.2□□□□□ -0.46
SREBF1-205ENST00000395757 MARCH11A6NNE9 402 aa12.2□□□□□ -0.46
SREBF1-205ENST00000395757 SRSF4Q08170 494 aaKnown RBP12.2□□□□□ -0.46
SREBF1-205ENST00000395757 RPRMLQ8N4K4 120 aa12.2□□□□□ -0.46
SREBF1-205ENST00000395757 EIF4E3Q8N5X7 224 aaKnown RBP12.2□□□□□ -0.46
SREBF1-205ENST00000395757 TMEM30CPA0ZSE6 113 aa12.19□□□□□ -0.46
SREBF1-205ENST00000395757 CYB5BO43169 146 aa12.19□□□□□ -0.46
SREBF1-205ENST00000395757 SEC11BP0C7V7 166 aa12.19□□□□□ -0.46
SREBF1-205ENST00000395757 GPR12P47775 334 aa12.19□□□□□ -0.46
SREBF1-205ENST00000395757 RAB4BP61018 213 aa12.19□□□□□ -0.46
SREBF1-205ENST00000395757 HBG1P69891 147 aa12.19□□□□□ -0.46
SREBF1-205ENST00000395757 HBG2P69892 147 aa12.19□□□□□ -0.46
SREBF1-205ENST00000395757 DMRTA1Q5VZB9 504 aa12.19□□□□□ -0.46
SREBF1-205ENST00000395757 BTNL8Q6UX41 500 aa12.19□□□□□ -0.46
SREBF1-205ENST00000395757 FAM185AQ8N0U4 392 aa12.19□□□□□ -0.46
SREBF1-205ENST00000395757 FGFRL1Q8N441 504 aa12.19□□□□□ -0.46
SREBF1-205ENST00000395757 TSTD3H0UI37 97 aa12.19□□□□□ -0.46
SREBF1-205ENST00000395757 SLC38A11Q08AI6 406 aa12.19□□□□□ -0.46
SREBF1-205ENST00000395757 CATR1Q13166 79 aa12.19□□□□□ -0.46
SREBF1-205ENST00000395757 RNF122Q9H9V4 155 aa12.19□□□□□ -0.46
SREBF1-205ENST00000395757 DMRT1Q9Y5R6 373 aa12.19□□□□□ -0.46
SREBF1-205ENST00000395757 TRAV17A0A0B4J275 112 aa12.19□□□□□ -0.46
SREBF1-205ENST00000395757 C19orf67A6NJJ6 358 aa12.19□□□□□ -0.46
SREBF1-205ENST00000395757 H3BQ15 152 aa12.19□□□□□ -0.46
SREBF1-205ENST00000395757 S1PR2O95136 353 aa12.19□□□□□ -0.46
SREBF1-205ENST00000395757 TMEM45BQ96B21 275 aa12.19□□□□□ -0.46
SREBF1-205ENST00000395757 RPRMQ9NS64 109 aa12.19□□□□□ -0.46
SREBF1-205ENST00000395757 LIN7CQ9NUP9 197 aaKnown RBP12.19□□□□□ -0.46
SREBF1-205ENST00000395757 CRYAAP02489 173 aa12.18□□□□□ -0.46
SREBF1-205ENST00000395757 GAPDHP04406 335 aaKnown RBP12.18□□□□□ -0.46
SREBF1-205ENST00000395757 CECR9P0C854 216 aa12.18□□□□□ -0.46
SREBF1-205ENST00000395757 ZADH2Q8N4Q0 377 aa12.18□□□□□ -0.46
SREBF1-205ENST00000395757 EXPH5Q8NEV8 1989 aa12.18□□□□□ -0.46
SREBF1-205ENST00000395757 C12orf77C9JDV5 145 aa12.18□□□□□ -0.46
SREBF1-205ENST00000395757 SPINT2O43291 252 aa12.18□□□□□ -0.46
SREBF1-205ENST00000395757 FGF7P21781 194 aa12.18□□□□□ -0.46
SREBF1-205ENST00000395757 ZNF880Q6PDB4 577 aa12.18□□□□□ -0.46
SREBF1-205ENST00000395757 TMEM108Q6UXF1 575 aa12.18□□□□□ -0.46
SREBF1-205ENST00000395757 WDR86Q86TI4 376 aa12.18□□□□□ -0.46
SREBF1-205ENST00000395757 OR4F5Q8NH21 305 aa12.18□□□□□ -0.46
SREBF1-205ENST00000395757 H1FXQ92522 213 aaKnown RBP12.18□□□□□ -0.46
SREBF1-205ENST00000395757 OR4C12Q96R67 309 aa12.18□□□□□ -0.46
SREBF1-205ENST00000395757 OR4F4Q96R69 305 aa12.18□□□□□ -0.46
SREBF1-205ENST00000395757 ANAPC10Q9UM13 185 aa12.18□□□□□ -0.46
SREBF1-205ENST00000395757 GAB2Q9UQC2 676 aa12.18□□□□□ -0.46
SREBF1-205ENST00000395757 ADGRG4Q8IZF6 3080 aa12.18□□□□□ -0.46
SREBF1-205ENST00000395757 COL4A2P08572 1712 aa12.18□□□□□ -0.46
SREBF1-205ENST00000395757 CEACAM18A8MTB9 384 aa12.18□□□□□ -0.46
SREBF1-205ENST00000395757 YIF1AO95070 293 aa12.18□□□□□ -0.46
SREBF1-205ENST00000395757 RAB4AP20338 218 aa12.18□□□□□ -0.46
SREBF1-205ENST00000395757 SELENOVP59797 346 aa12.18□□□□□ -0.46
SREBF1-205ENST00000395757 CCL8P80075 99 aa12.18□□□□□ -0.46
SREBF1-205ENST00000395757 ZNF528Q3MIS6 628 aa12.18□□□□□ -0.46
SREBF1-205ENST00000395757 STRAPQ9Y3F4 350 aaKnown RBP12.18□□□□□ -0.46
SREBF1-205ENST00000395757 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.18□□□□□ -0.463e-7■■■□□ 19
SREBF1-205ENST00000395757 PTPRQQ9UMZ3 2332 aa12.18□□□□□ -0.46
SREBF1-205ENST00000395757 ZG16O60844 167 aa12.17□□□□□ -0.46
SREBF1-205ENST00000395757 CA11O75493 328 aa12.17□□□□□ -0.46
SREBF1-205ENST00000395757 DFFBO76075 338 aa12.17□□□□□ -0.46
SREBF1-205ENST00000395757 DLK1P80370 383 aa12.17□□□□□ -0.46
SREBF1-205ENST00000395757 MSMO1Q15800 293 aa12.17□□□□□ -0.46
SREBF1-205ENST00000395757 RAB39BQ96DA2 213 aa12.17□□□□□ -0.46
SREBF1-205ENST00000395757 GNPNAT1Q96EK6 184 aaPredicted RBP12.17□□□□□ -0.46
SREBF1-205ENST00000395757 GMPPAQ96IJ6 420 aaPredicted RBP12.17□□□□□ -0.46
SREBF1-205ENST00000395757 LINC00470Q9BZP3 86 aa12.17□□□□□ -0.46
SREBF1-205ENST00000395757 OR51I2Q9H344 312 aa12.17□□□□□ -0.46
SREBF1-205ENST00000395757 PATZ1Q9HBE1 687 aaKnown RBP12.17□□□□□ -0.46
SREBF1-205ENST00000395757 LYRM2Q9NU23 88 aaPredicted RBP12.17□□□□□ -0.46
SREBF1-205ENST00000395757 IGKV3D-15A0A087WSY6 115 aa12.17□□□□□ -0.46
SREBF1-205ENST00000395757 C17orf98A8MV24 154 aa12.17□□□□□ -0.46
SREBF1-205ENST00000395757 PTBP3O95758 552 aaKnown RBP12.17□□□□□ -0.46
SREBF1-205ENST00000395757 NAPSAO96009 420 aa12.17□□□□□ -0.46
SREBF1-205ENST00000395757 APELAP0DMC3 54 aa12.17□□□□□ -0.46
SREBF1-205ENST00000395757 ERVFRD-1P60508 538 aa12.17□□□□□ -0.46
SREBF1-205ENST00000395757 UNQ6494/PRO21346Q6UXR6 183 aa12.17□□□□□ -0.46
SREBF1-205ENST00000395757 OR4A16Q8NH70 328 aa12.17□□□□□ -0.46
SREBF1-205ENST00000395757 ATP5SQ99766 215 aa12.17□□□□□ -0.46
SREBF1-205ENST00000395757 MAP1LC3B2A6NCE7 125 aa12.16□□□□□ -0.46
SREBF1-205ENST00000395757 CDC34P49427 236 aaPredicted RBP12.16□□□□□ -0.46
SREBF1-205ENST00000395757 OR4D5Q8NGN0 318 aa12.16□□□□□ -0.46
SREBF1-205ENST00000395757 OR13A1Q8NGR1 328 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms