RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 DUSP23Q9BVJ7 150 aa11.8□□□□□ -0.52
CCDC57-203ENST00000392343 SNHG12Q9BXW3 62 aa11.8□□□□□ -0.52
CCDC57-203ENST00000392343 TP53TG5Q9Y2B4 290 aa11.8□□□□□ -0.52
CCDC57-203ENST00000392343 ZG16O60844 167 aa11.79□□□□□ -0.52
CCDC57-203ENST00000392343 COL8A2P25067 703 aa11.79□□□□□ -0.52
CCDC57-203ENST00000392343 SPCS3P61009 180 aa11.79□□□□□ -0.52
CCDC57-203ENST00000392343 C3AR1Q16581 482 aa11.79□□□□□ -0.52
CCDC57-203ENST00000392343 CST9LP1Q5W188 147 aa11.79□□□□□ -0.52
CCDC57-203ENST00000392343 APOBEC3DQ96AK3 386 aaPredicted RBP11.79□□□□□ -0.52
CCDC57-203ENST00000392343 TMEM18Q96B42 140 aa11.79□□□□□ -0.52
CCDC57-203ENST00000392343 ANKRD30BLA7E2S9 258 aa11.79□□□□□ -0.52
CCDC57-203ENST00000392343 B4E171 279 aa11.79□□□□□ -0.52
CCDC57-203ENST00000392343 GCGP01275 180 aa11.79□□□□□ -0.52
CCDC57-203ENST00000392343 TFF1P04155 84 aa11.79□□□□□ -0.52
CCDC57-203ENST00000392343 MPLP40238 635 aa11.79□□□□□ -0.52
CCDC57-203ENST00000392343 FOLR3P41439 243 aa11.79□□□□□ -0.52
CCDC57-203ENST00000392343 TSPAN7P41732 249 aa11.79□□□□□ -0.52
CCDC57-203ENST00000392343 NUTF2P61970 127 aaKnown RBP11.79□□□□□ -0.52
CCDC57-203ENST00000392343 TNFRSF9Q07011 255 aa11.79□□□□□ -0.52
CCDC57-203ENST00000392343 BTNL3Q6UXE8 466 aa11.79□□□□□ -0.52
CCDC57-203ENST00000392343 TCF23Q7RTU1 214 aa11.79□□□□□ -0.52
CCDC57-203ENST00000392343 AGMATQ9BSE5 352 aa11.79□□□□□ -0.52
CCDC57-203ENST00000392343 HES7Q9BYE0 225 aa11.79□□□□□ -0.52
CCDC57-203ENST00000392343 RIMS4Q9H426 269 aaPredicted RBP11.79□□□□□ -0.52
CCDC57-203ENST00000392343 OR6C3Q9NZP0 311 aa11.79□□□□□ -0.52
CCDC57-203ENST00000392343 ZNF320A2RRD8 509 aa11.78□□□□□ -0.52
CCDC57-203ENST00000392343 ACTL10Q5JWF8 245 aa11.78□□□□□ -0.52
CCDC57-203ENST00000392343 DBX2Q6ZNG2 339 aa11.78□□□□□ -0.52
CCDC57-203ENST00000392343 NEU1Q99519 415 aa11.78□□□□□ -0.52
CCDC57-203ENST00000392343 MRPL37Q9BZE1 423 aaKnown RBP11.78□□□□□ -0.52
CCDC57-203ENST00000392343 OR2H2O95918 312 aa11.78□□□□□ -0.52
CCDC57-203ENST00000392343 RPL30P62888 115 aaKnown RBP11.78□□□□□ -0.52
CCDC57-203ENST00000392343 FIP1L1Q6UN15 594 aaKnown RBP11.78□□□□□ -0.52
CCDC57-203ENST00000392343 TMEM14EPQ6UXP3 125 aa11.78□□□□□ -0.52
CCDC57-203ENST00000392343 TGIF2LYQ8IUE0 185 aa11.78□□□□□ -0.52
CCDC57-203ENST00000392343 PHF7Q9BWX1 381 aaPredicted RBP11.78□□□□□ -0.52
CCDC57-203ENST00000392343 LIN7CQ9NUP9 197 aaKnown RBP11.78□□□□□ -0.52
CCDC57-203ENST00000392343 ZFHX4Q86UP3 3567 aa11.78□□□□□ -0.52
CCDC57-203ENST00000392343 PRR14LQ5THK1 2151 aa11.78□□□□□ -0.52
CCDC57-203ENST00000392343 CTXND1A0A1B0GTU2 59 aa11.77□□□□□ -0.52
CCDC57-203ENST00000392343 C11orf94C9JXX5 98 aa11.77□□□□□ -0.52
CCDC57-203ENST00000392343 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.77□□□□□ -0.52
CCDC57-203ENST00000392343 C1QTNF9P0C862 333 aa11.77□□□□□ -0.52
CCDC57-203ENST00000392343 IL3RAP26951 378 aa11.77□□□□□ -0.52
CCDC57-203ENST00000392343 ATP5G3P48201 142 aa11.77□□□□□ -0.52
CCDC57-203ENST00000392343 CNN1P51911 297 aaKnown RBP11.77□□□□□ -0.52
CCDC57-203ENST00000392343 COA6Q5JTJ3 125 aaKnown RBP11.77□□□□□ -0.52
CCDC57-203ENST00000392343 TRAV38-1A0A0B4J264 116 aa11.77□□□□□ -0.53
CCDC57-203ENST00000392343 GRIFINA4D1Z8 144 aa11.77□□□□□ -0.53
CCDC57-203ENST00000392343 FAM166BA8MTA8 275 aa11.77□□□□□ -0.53
CCDC57-203ENST00000392343 PDGFBP01127 241 aaPredicted RBP11.77□□□□□ -0.53
CCDC57-203ENST00000392343 GNG3P63215 75 aa11.77□□□□□ -0.53
CCDC57-203ENST00000392343 IL11RAQ14626 422 aa11.77□□□□□ -0.53
CCDC57-203ENST00000392343 Q6P435 159 aa11.77□□□□□ -0.53
CCDC57-203ENST00000392343 ZNF573Q86YE8 665 aa11.77□□□□□ -0.53
CCDC57-203ENST00000392343 ZNF114Q8NC26 417 aa11.77□□□□□ -0.53
CCDC57-203ENST00000392343 ACY3Q96HD9 319 aa11.77□□□□□ -0.53
CCDC57-203ENST00000392343 C12orf49Q9H741 205 aa11.77□□□□□ -0.53
CCDC57-203ENST00000392343 TRAPPC1Q9Y5R8 145 aa11.77□□□□□ -0.53
CCDC57-203ENST00000392343 LOC400499M0QZD8 3231 aa11.77□□□□□ -0.53
CCDC57-203ENST00000392343 TMEM250H0YL14 139 aa11.77□□□□□ -0.53
CCDC57-203ENST00000392343 CFIP05156 583 aa11.77□□□□□ -0.53
CCDC57-203ENST00000392343 GCH1P30793 250 aa11.77□□□□□ -0.53
CCDC57-203ENST00000392343 HOXA6P31267 233 aa11.77□□□□□ -0.53
CCDC57-203ENST00000392343 SDSLQ96GA7 329 aa11.77□□□□□ -0.53
CCDC57-203ENST00000392343 POM121L2Q96KW2 1035 aa11.77□□□□□ -0.53
CCDC57-203ENST00000392343 OR2D2Q9H210 308 aa11.77□□□□□ -0.53
CCDC57-203ENST00000392343 FKBP11Q9NYL4 201 aa11.77□□□□□ -0.53
CCDC57-203ENST00000392343 MRPS17Q9Y2R5 130 aaKnown RBP11.77□□□□□ -0.53
CCDC57-203ENST00000392343 ODAMA1E959 279 aa11.76□□□□□ -0.53
CCDC57-203ENST00000392343 ZNF705FA8MVS1 300 aaPredicted RBP11.76□□□□□ -0.53
CCDC57-203ENST00000392343 S1PR2O95136 353 aa11.76□□□□□ -0.53
CCDC57-203ENST00000392343 NDUFB4O95168 129 aa11.76□□□□□ -0.53
CCDC57-203ENST00000392343 ZNF705DP0CH99 300 aaPredicted RBP11.76□□□□□ -0.53
CCDC57-203ENST00000392343 ZNF705BP0CI00 300 aaPredicted RBP11.76□□□□□ -0.53
CCDC57-203ENST00000392343 GFRA1P56159 465 aa11.76□□□□□ -0.53
CCDC57-203ENST00000392343 CENPVQ7Z7K6 275 aaPredicted RBP11.76□□□□□ -0.53
CCDC57-203ENST00000392343 MCEMP1Q8IX19 187 aa11.76□□□□□ -0.53
CCDC57-203ENST00000392343 NEIL1Q96FI4 390 aaPredicted RBP11.76□□□□□ -0.53
CCDC57-203ENST00000392343 PLPPR2Q96GM1 343 aa11.76□□□□□ -0.53
CCDC57-203ENST00000392343 CDIPTO14735 213 aa11.76□□□□□ -0.53
CCDC57-203ENST00000392343 RPL29P47914 159 aaKnown RBP11.76□□□□□ -0.53
CCDC57-203ENST00000392343 CXCL12P48061 93 aa11.76□□□□□ -0.53
CCDC57-203ENST00000392343 PDLIM4P50479 330 aa11.76□□□□□ -0.53
CCDC57-203ENST00000392343 SPEM1Q8N4L4 309 aa11.76□□□□□ -0.53
CCDC57-203ENST00000392343 GBGT1Q8N5D6 347 aa11.76□□□□□ -0.53
CCDC57-203ENST00000392343 OR10P1Q8NGE3 313 aa11.76□□□□□ -0.53
CCDC57-203ENST00000392343 OR52L2PQ8NGH6 319 aa11.76□□□□□ -0.53
CCDC57-203ENST00000392343 IER2Q9BTL4 223 aa11.76□□□□□ -0.53
CCDC57-203ENST00000392343 NPCDR1Q9BY65 106 aa11.76□□□□□ -0.53
CCDC57-203ENST00000392343 POLR3KQ9Y2Y1 108 aaPredicted RBP11.76□□□□□ -0.53
CCDC57-203ENST00000392343 GGCTO75223 188 aaKnown RBP11.75□□□□□ -0.53
CCDC57-203ENST00000392343 TDRG1Q3Y452 100 aa11.75□□□□□ -0.53
CCDC57-203ENST00000392343 LBHQ53QV2 105 aaPredicted RBP11.75□□□□□ -0.53
CCDC57-203ENST00000392343 LYSMD4Q5XG99 296 aa11.75□□□□□ -0.53
CCDC57-203ENST00000392343 CXorf67Q86X51 503 aaPredicted RBP11.75□□□□□ -0.53
CCDC57-203ENST00000392343 ZNF709Q8N972 641 aa11.75□□□□□ -0.53
CCDC57-203ENST00000392343 BEND2Q8NDZ0 799 aa11.75□□□□□ -0.53
CCDC57-203ENST00000392343 C5orf30Q96GV9 206 aa11.75□□□□□ -0.53
CCDC57-203ENST00000392343 PATZ1Q9HBE1 687 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms