RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 F2Z2F3 143 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 F8W1H4 67 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 GOLGA8SH3BPF8 625 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 H3BSA7 217 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 K7EQS6 105 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 M0R233 179 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 SULT1C2O00338 296 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 UBE2L6O14933 153 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 SULT1B1O43704 296 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 SSX5O60225 188 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 KINO60870 393 aaKnown RBP-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 DHRS3O75911 302 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 LYZL6O75951 148 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 TCL1BO95988 128 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 PPYP01298 95 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 MT2AP02795 61 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 SERPINA5P05154 406 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 CRYBA1P05813 215 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 RHOCP08134 193 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 RAB4AP20338 218 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 SPRR1BP22528 89 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 MSNP26038 577 aaKnown RBP-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 CRYBB3P26998 211 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 GABRA3P34903 492 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 SSR2P43308 183 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 RAB7AP51149 207 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 DUSP3P51452 185 aaPredicted RBP-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 STXBP1P61764 594 aaKnown RBP-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 MRPS22P82650 360 aaKnown RBP-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 YWHAHQ04917 246 aaPredicted RBP-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 EDDM3AQ14507 147 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 RCN1Q15293 331 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 PSMD5Q16401 504 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 MAPK14Q16539 360 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 DEFB113Q30KQ7 82 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 Q499Y3 187 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 GGTA1PQ4G0N0 100 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 CCDC183Q5T5S1 534 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 ARMC12Q5T9G4 340 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 PRAMEF5Q5TYX0 476 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 NXNL2Q5VZ03 156 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 XAF1Q6GPH4 301 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 FAM180BQ6P0A1 224 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 NIPAL3Q6P499 406 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 CFAP161Q6P656 301 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 WDR82Q6UXN9 313 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 RBM43Q6ZSC3 357 aaKnown RBP-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 SLC25A48Q6ZT89 311 aaKnown RBP-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 H2BFWTQ7Z2G1 175 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 SSBP3-AS1Q7Z2R9 100 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 EFL1Q7Z2Z2 1120 aaKnown RBP-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 SETD3Q86TU7 594 aaPredicted RBP-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 TEN1Q86WV5 123 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 CBLN2Q8IUK8 224 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 SLC30A8Q8IWU4 369 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 MICU2Q8IYU8 434 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 LRRC34Q8IZ02 419 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 SLC38A6Q8IZM9 456 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 CYP4Z2PQ8N1L4 340 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 C10orf111Q8N326 155 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 RNF148Q8N7C7 305 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 ZNF676Q8N7Q3 588 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 GATD1Q8NB37 220 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 SDR9C7Q8NEX9 313 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 OR4K2Q8NGD2 314 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 OR56B1Q8NGI3 324 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 OR4D5Q8NGN0 318 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 OR1S2Q8NGQ3 325 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 OR6K3Q8NGY3 331 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 OR10J5Q8NHC4 309 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 TRMT10AQ8TBZ6 339 aaKnown RBP-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 GPX8Q8TED1 209 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 DDI1Q8WTU0 396 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 ACOT12Q8WYK0 555 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 GALMQ96C23 342 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 TBC1D31Q96DN5 1066 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 DTD2Q96FN9 168 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 PLEKHA8Q96JA3 519 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 SENP8Q96LD8 212 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 FAM19A4Q96LR4 140 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 TBATAQ96M53 351 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 LINC00052Q96N35 136 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 SCLT1Q96NL6 688 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 OLFM3Q96PB7 478 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 CRACR2AQ9BSW2 395 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 UPF3BQ9BZI7 483 aaKnown RBP-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 TRIM4Q9C037 500 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 OR8D2Q9GZM6 311 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 ANKRD2Q9GZV1 360 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 TCEAL2Q9H3H9 227 aaPredicted RBP-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 TMEM231Q9H6L2 316 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 COQ10BQ9H8M1 238 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 NMRAL1Q9HBL8 299 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 HES4Q9HCC6 221 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 TUBG2Q9NRH3 451 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 TMEM100Q9NV29 134 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 ARGLU1Q9NWB6 273 aaPredicted RBP-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 CLN6Q9NWW5 311 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 DDIT4Q9NX09 232 aa-0.78□□□□□ -2.53
TRAJ28-201ENST00000390509 TAS2R7Q9NYW3 318 aa-0.78□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms