RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 BEND6Q5SZJ8 279 aaPredicted RBP-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 C1orf194Q5T5A4 169 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 CCDC183Q5T5S1 534 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 SSX8Q7RTT4 187 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 FAM19A3Q7Z5A8 133 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 YRDCQ86U90 279 aaKnown RBP-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 IQCF2Q8IXL9 164 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 CMTM1Q8IZ96 169 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 UBE2J2Q8N2K1 259 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 DEFB123Q8N688 67 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 BCORP1Q8N888 145 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR6C4Q8NGE1 309 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR9G4Q8NGQ1 327 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR2AE1Q8NHA4 323 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 NDNFQ8TB73 568 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 NT5CQ8TCD5 201 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 PIBF1Q8WXW3 757 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 ELMO1Q92556 727 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 MAL2Q969L2 176 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 EEF1AKMT3Q96AZ1 226 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 CMTM3Q96MX0 182 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 GSDMAQ96QA5 445 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 SLF1Q9BQI6 1058 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 CCDC94Q9BW85 323 aaPredicted RBP-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 PLEKHF2Q9H8W4 249 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 PARVGQ9HBI0 331 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 NRN1Q9NPD7 142 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 NOP10Q9NPE3 64 aaKnown RBP-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 NRBP2Q9NSY0 501 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 CMTM6Q9NX76 183 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 PLEK2Q9NYT0 353 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 TAS2R9Q9NYW1 312 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 SHPKQ9UHJ6 478 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 PYCARDQ9ULZ3 195 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 FLVCR2Q9UPI3 526 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR1A2Q9Y585 309 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 TRPV2Q9Y5S1 764 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 SLC22A7Q9Y694 548 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 SHPRHQ149N8 1683 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 KIF21AQ7Z4S6 1674 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 HECW2Q9P2P5 1572 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 RAD50Q92878 1312 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 A0A0G2JMZ2 1700 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 LRRC37A2A6NM11 1700 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 LRRC37AA6NMS7 1700 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 RICTORQ6R327 1708 aa-1.94□□□□□ -2.72
RNU6-540P-201ENST00000384622 TRBV20OR9-2A0A075B6H5 130 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 hDV103S1A0JD37 113 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 MAGEB16A2A368 324 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 RBAKDNA6NC62 111 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 SMCO2A6NFE2 343 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 H3BQV1 296 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 H3BSA7 217 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 SLC30A4O14863 429 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 EIF5BO60841 1220 aaKnown RBP-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 LYZL6O75951 148 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 NDUFA7O95182 113 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 KRASP01116 189 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 IGHV3-33P01772 117 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 MT-ND4P03905 459 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 SERPINA5P05154 406 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 IL6P05231 212 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR5AL1P0C617 328 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 DEFB130BP0DP73 79 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 DEFB130AP0DP74 79 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 HLA-EP13747 358 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 GSTM3P21266 225 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 FKBP2P26885 142 aaKnown RBP-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 AKT2P31751 481 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 SPAM1P38567 509 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 GYG1P46976 350 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 GABRA2P47869 451 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 RAB7AP51149 207 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 CCR4P51679 360 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 CDKN2DP55273 166 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 PKNOX1P55347 436 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 MTCP1P56278 107 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 MAP3K7CLP57077 242 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 TAS2R39P59534 338 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 FXYD4P59646 89 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 IFITM2Q01629 132 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 BAXQ07812 192 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 GAMTQ14353 236 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 PSMD6Q15008 389 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 KARSQ15046 597 aaKnown RBP-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 TBCEQ15813 527 aaPredicted RBP-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 ARHGAP11BQ3KRB8 267 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 FAM74A1Q5RGS3 127 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 UBE2UQ5VVX9 321 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 STEAP1BQ6NZ63 245 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 TMEM154Q6P9G4 183 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 ATRAIDQ6UW56 229 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 NIPA1Q7RTP0 329 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 TMEM144Q7Z5S9 345 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 DRAM1Q8N682 238 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 ARFGAP2Q8N6H7 521 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 KRTCAP2Q8N6L1 136 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 C5orf56Q8N8D9 126 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR4F15Q8NGB8 312 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR51S1Q8NGJ8 323 aa-1.95□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms