RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 C9orf50Q5SZB4 431 aa17.16■□□□□ 0.34
COL15A1-201ENST00000375001 ZNF488Q96MN9 340 aa17.16■□□□□ 0.34
COL15A1-201ENST00000375001 FAM206AQ9NX38 181 aa17.16■□□□□ 0.34
COL15A1-201ENST00000375001 MPDU1O75352 247 aa17.16■□□□□ 0.34
COL15A1-201ENST00000375001 REG1BP48304 166 aa17.16■□□□□ 0.34
COL15A1-201ENST00000375001 RBM11P57052 281 aaKnown RBP17.16■□□□□ 0.34
COL15A1-201ENST00000375001 RNFT1Q5M7Z0 435 aa17.16■□□□□ 0.34
COL15A1-201ENST00000375001 OR2H1Q9GZK4 316 aa17.16■□□□□ 0.34
COL15A1-201ENST00000375001 SHISA7A6NL88 538 aa17.16■□□□□ 0.34
COL15A1-201ENST00000375001 C1QTNF9BB2RNN3 333 aa17.16■□□□□ 0.34
COL15A1-201ENST00000375001 RTN4RQ9BZR6 473 aa17.16■□□□□ 0.34
COL15A1-201ENST00000375001 CA1P00915 261 aaPredicted RBP17.15■□□□□ 0.34
COL15A1-201ENST00000375001 ZNF441Q8N8Z8 693 aa17.15■□□□□ 0.34
COL15A1-201ENST00000375001 MRPL16Q9NX20 251 aaKnown RBP17.15■□□□□ 0.34
COL15A1-201ENST00000375001 CEACAM18A8MTB9 384 aa17.15■□□□□ 0.34
COL15A1-201ENST00000375001 TSPAN2O60636 221 aa17.15■□□□□ 0.34
COL15A1-201ENST00000375001 CA11O75493 328 aa17.15■□□□□ 0.34
COL15A1-201ENST00000375001 TMEM92Q6UXU6 159 aa17.15■□□□□ 0.34
COL15A1-201ENST00000375001 H0Y980 276 aa17.15■□□□□ 0.34
COL15A1-201ENST00000375001 HPRT1P00492 218 aa17.15■□□□□ 0.34
COL15A1-201ENST00000375001 CRYBB3P26998 211 aa17.15■□□□□ 0.34
COL15A1-201ENST00000375001 TMEM108Q6UXF1 575 aa17.15■□□□□ 0.34
COL15A1-201ENST00000375001 OR52M1Q8NGK5 317 aa17.15■□□□□ 0.34
COL15A1-201ENST00000375001 SCN3AQ9NY46 2000 aa17.15■□□□□ 0.34
COL15A1-201ENST00000375001 TRAV8-6A0A0B4J262 113 aa17.15■□□□□ 0.34
COL15A1-201ENST00000375001 SPCS1Q9Y6A9 102 aa17.15■□□□□ 0.34
COL15A1-201ENST00000375001 ROM1Q03395 351 aa17.14■□□□□ 0.34
COL15A1-201ENST00000375001 OR4D5Q8NGN0 318 aa17.14■□□□□ 0.34
COL15A1-201ENST00000375001 MKRN2OSH3BPM6 223 aa17.14■□□□□ 0.33
COL15A1-201ENST00000375001 SLC25A38Q96DW6 304 aa17.14■□□□□ 0.33
COL15A1-201ENST00000375001 ZNF124Q15973 351 aa17.14■□□□□ 0.33
COL15A1-201ENST00000375001 TMEM52Q8NDY8 209 aa17.14■□□□□ 0.33
COL15A1-201ENST00000375001 SFRP2Q96HF1 295 aa17.14■□□□□ 0.33
COL15A1-201ENST00000375001 TNFRSF19Q9NS68 423 aa17.14■□□□□ 0.33
COL15A1-201ENST00000375001 WNT16Q9UBV4 365 aa17.14■□□□□ 0.33
COL15A1-201ENST00000375001 TRPM6Q9BX84 2022 aa17.14■□□□□ 0.33
COL15A1-201ENST00000375001 IGHV1OR21-1A0A087WYE8 117 aa17.14■□□□□ 0.33
COL15A1-201ENST00000375001 ARL14EPLP0DKL9 152 aa17.14■□□□□ 0.33
COL15A1-201ENST00000375001 TM4SF20Q53R12 229 aa17.14■□□□□ 0.33
COL15A1-201ENST00000375001 SRSF12Q8WXF0 261 aaKnown RBP17.14■□□□□ 0.33
COL15A1-201ENST00000375001 SGK494Q96LW2 274 aa17.14■□□□□ 0.33
COL15A1-201ENST00000375001 R4GN57 208 aa17.14■□□□□ 0.33
COL15A1-201ENST00000375001 K7EQS6 105 aa17.14■□□□□ 0.33
COL15A1-201ENST00000375001 BGLAPP02818 100 aa17.14■□□□□ 0.33
COL15A1-201ENST00000375001 PRSS53Q2L4Q9 553 aa17.14■□□□□ 0.33
COL15A1-201ENST00000375001 RHBDD2Q6NTF9 364 aa17.14■□□□□ 0.33
COL15A1-201ENST00000375001 SSBP3Q9BWW4 388 aaPredicted RBP17.14■□□□□ 0.33
COL15A1-201ENST00000375001 LINC00470Q9BZP3 86 aa17.14■□□□□ 0.33
COL15A1-201ENST00000375001 EAF1Q96JC9 268 aaPredicted RBP17.13■□□□□ 0.33
COL15A1-201ENST00000375001 EGR1P18146 543 aa17.13■□□□□ 0.33
COL15A1-201ENST00000375001 PRSS27Q9BQR3 290 aa17.13■□□□□ 0.33
COL15A1-201ENST00000375001 SCNM1Q9BWG6 230 aa17.13■□□□□ 0.33
COL15A1-201ENST00000375001 MEGF9Q9H1U4 602 aa17.13■□□□□ 0.33
COL15A1-201ENST00000375001 TRAV17A0A0B4J275 112 aa17.13■□□□□ 0.33
COL15A1-201ENST00000375001 TMEM210A6NLX4 147 aa17.13■□□□□ 0.33
COL15A1-201ENST00000375001 IGHV3OR15-7A0A075B7D8 119 aa17.12■□□□□ 0.33
COL15A1-201ENST00000375001 TMEM78Q5T7P6 136 aa17.12■□□□□ 0.33
COL15A1-201ENST00000375001 MBNL2Q5VZF2 373 aaKnown RBP17.12■□□□□ 0.33
COL15A1-201ENST00000375001 ATRAIDQ6UW56 229 aa17.12■□□□□ 0.33
COL15A1-201ENST00000375001 ZNF784Q8NCA9 323 aaPredicted RBP17.12■□□□□ 0.33
COL15A1-201ENST00000375001 OR4C13Q8NGP0 309 aa17.12■□□□□ 0.33
COL15A1-201ENST00000375001 GPHA2Q96T91 129 aa17.12■□□□□ 0.33
COL15A1-201ENST00000375001 DTX4Q9Y2E6 619 aa17.12■□□□□ 0.33
COL15A1-201ENST00000375001 TRBV9A0A0B4J1U6 114 aa17.12■□□□□ 0.33
COL15A1-201ENST00000375001 ZIC3O60481 467 aa17.12■□□□□ 0.33
COL15A1-201ENST00000375001 TYMSP04818 313 aa17.12■□□□□ 0.33
COL15A1-201ENST00000375001 HOXC4P09017 264 aaPredicted RBP17.12■□□□□ 0.33
COL15A1-201ENST00000375001 TPRX1Q8N7U7 411 aa17.12■□□□□ 0.33
COL15A1-201ENST00000375001 SCTP09683 121 aa17.12■□□□□ 0.33
COL15A1-201ENST00000375001 FOXA3P55318 350 aaPredicted RBP17.12■□□□□ 0.33
COL15A1-201ENST00000375001 UNC119Q13432 240 aa17.12■□□□□ 0.33
COL15A1-201ENST00000375001 GPR146Q96CH1 333 aa17.12■□□□□ 0.33
COL15A1-201ENST00000375001 TBL2Q9Y4P3 447 aaKnown RBP17.12■□□□□ 0.33
COL15A1-201ENST00000375001 ATG2BQ96BY7 2078 aa17.12■□□□□ 0.33
COL15A1-201ENST00000375001 CGB1A6NKQ9 187 aa17.12■□□□□ 0.33
COL15A1-201ENST00000375001 GGTLC2Q14390 218 aa17.12■□□□□ 0.33
COL15A1-201ENST00000375001 GUSBP11Q6P575 273 aa17.12■□□□□ 0.33
COL15A1-201ENST00000375001 A0A1W2PQD3 144 aa17.11■□□□□ 0.33
COL15A1-201ENST00000375001 CD1AP06126 327 aa17.11■□□□□ 0.33
COL15A1-201ENST00000375001 CSRP3P50461 194 aa17.11■□□□□ 0.33
COL15A1-201ENST00000375001 ABHD14BQ96IU4 210 aa17.11■□□□□ 0.33
COL15A1-201ENST00000375001 CLEC1BQ9P126 229 aa17.11■□□□□ 0.33
COL15A1-201ENST00000375001 F2RL2O00254 374 aa17.11■□□□□ 0.33
COL15A1-201ENST00000375001 MMDQ15546 238 aa17.11■□□□□ 0.33
COL15A1-201ENST00000375001 FAM53AQ6NSI3 398 aaPredicted RBP17.11■□□□□ 0.33
COL15A1-201ENST00000375001 SPAG8Q99932 426 aaPredicted RBP17.11■□□□□ 0.33
COL15A1-201ENST00000375001 SF3B5Q9BWJ5 86 aaKnown RBP17.11■□□□□ 0.33
COL15A1-201ENST00000375001 C1RLQ9NZP8 487 aa17.11■□□□□ 0.33
COL15A1-201ENST00000375001 TNFSF10P50591 281 aa17.11■□□□□ 0.33
COL15A1-201ENST00000375001 LINC00596Q86U02 117 aa17.11■□□□□ 0.33
COL15A1-201ENST00000375001 TMEM160Q9NX00 188 aa17.11■□□□□ 0.33
COL15A1-201ENST00000375001 OR11H12B2RN74 326 aa17.11■□□□□ 0.33
COL15A1-201ENST00000375001 GLULP15104 373 aa17.11■□□□□ 0.33
COL15A1-201ENST00000375001 PEBP1P30086 187 aaKnown RBP17.11■□□□□ 0.33
COL15A1-201ENST00000375001 OR11H1Q8NG94 326 aa17.11■□□□□ 0.33
COL15A1-201ENST00000375001 OR11H2Q8NH07 326 aa17.11■□□□□ 0.33
COL15A1-201ENST00000375001 SPSB4Q96A44 273 aa17.11■□□□□ 0.33
COL15A1-201ENST00000375001 NPDC1Q9NQX5 325 aaPredicted RBP17.11■□□□□ 0.33
COL15A1-201ENST00000375001 ECSCRQ19T08 205 aa17.1■□□□□ 0.33
COL15A1-201ENST00000375001 NFAM1Q8NET5 270 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms