RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 GPR183P32249 361 aa12.25□□□□□ -0.45
RAPGEF1-202ENST00000372190 OTPQ5XKR4 325 aa12.25□□□□□ -0.45
RAPGEF1-202ENST00000372190 FAM53AQ6NSI3 398 aaPredicted RBP12.25□□□□□ -0.45
RAPGEF1-202ENST00000372190 OR4D5Q8NGN0 318 aa12.25□□□□□ -0.45
RAPGEF1-202ENST00000372190 ARHGAP5-AS1Q96IT6 56 aa12.25□□□□□ -0.45
RAPGEF1-202ENST00000372190 DNAJB12Q9NXW2 375 aaKnown RBP12.25□□□□□ -0.45
RAPGEF1-202ENST00000372190 TMSB15BA0A087X1C1 80 aa12.25□□□□□ -0.45
RAPGEF1-202ENST00000372190 CT62P0C5K7 136 aa12.25□□□□□ -0.45
RAPGEF1-202ENST00000372190 SPRY1O43609 319 aaPredicted RBP12.25□□□□□ -0.45
RAPGEF1-202ENST00000372190 MSRB3Q8IXL7 192 aa12.25□□□□□ -0.45
RAPGEF1-202ENST00000372190 Q8IYB0 196 aa12.25□□□□□ -0.45
RAPGEF1-202ENST00000372190 MYOZ1Q9NP98 299 aaPredicted RBP12.25□□□□□ -0.45
RAPGEF1-202ENST00000372190 LTBRP36941 435 aa12.25□□□□□ -0.45
RAPGEF1-202ENST00000372190 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.25□□□□□ -0.45
RAPGEF1-202ENST00000372190 OR4C3Q8NH37 302 aa12.25□□□□□ -0.45
RAPGEF1-202ENST00000372190 OTOSQ8NHW6 89 aa12.25□□□□□ -0.45
RAPGEF1-202ENST00000372190 SPSB1Q96BD6 273 aa12.25□□□□□ -0.45
RAPGEF1-202ENST00000372190 RCC1P18754 421 aaPredicted RBP12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 ERVH48-1M5A8F1 160 aa12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 CDC14BO60729 498 aa12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 ATP6V0CP27449 155 aa12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 GAGE13Q4V321 117 aa12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 TMEM45BQ96B21 275 aa12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 GTSF1LQ9H1H1 148 aa12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 VSIG4Q9Y279 399 aa12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 LRP12Q9Y561 859 aa12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 MARCH11A6NNE9 402 aa12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 LIFP15018 202 aa12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 SPINK9Q5DT21 86 aa12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 PAPPA-AS1Q5QFB9 102 aa12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 TCF24Q7RTU0 167 aa12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 BIVMQ86UB2 503 aa12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 OR51B2Q9Y5P1 312 aa12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 AGAP20933 346 aa12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 INSL4Q14641 139 aa12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 PRNTQ86SH4 94 aa12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 SLC25A42Q86VD7 318 aa12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 TMEM105Q8N8V8 129 aa12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 OR10AC1Q8NH08 325 aa12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 ZNF501Q96CX3 271 aaPredicted RBP12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 WNT10AQ9GZT5 417 aa12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 RBMY1BA6NDE4 496 aaKnown RBP12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 RBMY1EA6NEQ0 496 aaKnown RBP12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 RBMY1DP0C7P1 496 aaKnown RBP12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 RBMY1A1P0DJD3 496 aaKnown RBP12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 RBMY1CP0DJD4 496 aa12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 MVDP53602 400 aa12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 SERF2P84101 59 aa12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 ZG16BQ96DA0 208 aa12.24□□□□□ -0.45
RAPGEF1-202ENST00000372190 GDF9O60383 454 aa12.23□□□□□ -0.45
RAPGEF1-202ENST00000372190 GLIPR1P48060 266 aa12.23□□□□□ -0.45
RAPGEF1-202ENST00000372190 OR4X2Q8NGF9 303 aa12.23□□□□□ -0.45
RAPGEF1-202ENST00000372190 C1orf43Q9BWL3 253 aa12.23□□□□□ -0.45
RAPGEF1-202ENST00000372190 FAM181BA6NEQ2 426 aa12.23□□□□□ -0.45
RAPGEF1-202ENST00000372190 NUBP1P53384 320 aa12.23□□□□□ -0.45
RAPGEF1-202ENST00000372190 TMEM186Q96B77 213 aa12.23□□□□□ -0.45
RAPGEF1-202ENST00000372190 GALNT14Q96FL9 552 aa12.23□□□□□ -0.45
RAPGEF1-202ENST00000372190 IL36GQ9NZH8 169 aa12.23□□□□□ -0.45
RAPGEF1-202ENST00000372190 CLN8Q9UBY8 286 aa12.23□□□□□ -0.45
RAPGEF1-202ENST00000372190 KBTBD11-OT1A0A1B0GTJ5 212 aa12.23□□□□□ -0.45
RAPGEF1-202ENST00000372190 TAAR3PQ9P1P4 343 aa12.23□□□□□ -0.45
RAPGEF1-202ENST00000372190 PTPRZ1P23471 2315 aaPredicted RBP12.23□□□□□ -0.45
RAPGEF1-202ENST00000372190 CA6P23280 308 aa12.23□□□□□ -0.45
RAPGEF1-202ENST00000372190 CCL17Q92583 94 aa12.23□□□□□ -0.45
RAPGEF1-202ENST00000372190 F5P12259 2224 aa12.23□□□□□ -0.45
RAPGEF1-202ENST00000372190 LOC285556D6RIA3 1793 aa12.23□□□□□ -0.45
RAPGEF1-202ENST00000372190 A0A0B4J2E0 115 aa12.23□□□□□ -0.45
RAPGEF1-202ENST00000372190 A0A1B0GX12 115 aa12.23□□□□□ -0.45
RAPGEF1-202ENST00000372190 K7ESF4 209 aa12.23□□□□□ -0.45
RAPGEF1-202ENST00000372190 MPDU1O75352 247 aa12.23□□□□□ -0.45
RAPGEF1-202ENST00000372190 SLC25A1P53007 311 aa12.23□□□□□ -0.45
RAPGEF1-202ENST00000372190 CXorf67Q86X51 503 aaPredicted RBP12.23□□□□□ -0.45
RAPGEF1-202ENST00000372190 SSMEM1Q8WWF3 244 aa12.23□□□□□ -0.45
RAPGEF1-202ENST00000372190 ZNF714Q96N38 554 aa12.23□□□□□ -0.45
RAPGEF1-202ENST00000372190 TMEM160Q9NX00 188 aa12.23□□□□□ -0.45
RAPGEF1-202ENST00000372190 A0A1B0GTH9 108 aa12.22□□□□□ -0.45
RAPGEF1-202ENST00000372190 A0A1W2PQM1 296 aa12.22□□□□□ -0.45
RAPGEF1-202ENST00000372190 CCL3P10147 92 aa12.22□□□□□ -0.45
RAPGEF1-202ENST00000372190 S1PR2O95136 353 aa12.22□□□□□ -0.45
RAPGEF1-202ENST00000372190 PAX2Q02962 417 aa12.22□□□□□ -0.45
RAPGEF1-202ENST00000372190 TPTE2P1Q5T6R2 138 aa12.22□□□□□ -0.45
RAPGEF1-202ENST00000372190 SYT8Q8NBV8 401 aa12.22□□□□□ -0.45
RAPGEF1-202ENST00000372190 GEMIN7Q9H840 131 aaKnown RBP12.22□□□□□ -0.45
RAPGEF1-202ENST00000372190 ZNF107Q9UII5 783 aaPredicted RBP12.22□□□□□ -0.45
RAPGEF1-202ENST00000372190 SIGLEC7Q9Y286 467 aa12.22□□□□□ -0.45
RAPGEF1-202ENST00000372190 LTBP1Q14766 1721 aa12.22□□□□□ -0.45
RAPGEF1-202ENST00000372190 SERTM1A2A2V5 107 aa12.22□□□□□ -0.45
RAPGEF1-202ENST00000372190 CEACAM1P13688 526 aa12.22□□□□□ -0.45
RAPGEF1-202ENST00000372190 NUTF2P61970 127 aaKnown RBP12.22□□□□□ -0.45
RAPGEF1-202ENST00000372190 HBBP68871 147 aa12.22□□□□□ -0.45
RAPGEF1-202ENST00000372190 KRTCAP3Q53RY4 240 aa12.22□□□□□ -0.45
RAPGEF1-202ENST00000372190 OR4X1Q8NH49 305 aa12.22□□□□□ -0.45
RAPGEF1-202ENST00000372190 PGPEP1LA6NFU8 196 aa12.22□□□□□ -0.45
RAPGEF1-202ENST00000372190 TNFAIP6P98066 277 aaPredicted RBP12.22□□□□□ -0.45
RAPGEF1-202ENST00000372190 FMODQ06828 376 aa12.22□□□□□ -0.45
RAPGEF1-202ENST00000372190 LRRC75BQ2VPJ9 315 aa12.22□□□□□ -0.45
RAPGEF1-202ENST00000372190 GRIFINA4D1Z8 144 aa12.21□□□□□ -0.45
RAPGEF1-202ENST00000372190 GAPDHP04406 335 aaKnown RBP12.21□□□□□ -0.45
RAPGEF1-202ENST00000372190 VDAC1P21796 283 aa12.21□□□□□ -0.45
RAPGEF1-202ENST00000372190 TM4SF19Q96DZ7 209 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms