RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 ID4P47928 161 aa19.08■□□□□ 0.64
TM9SF3-201ENST00000371142 MEGF10Q96KG7 1140 aa19.08■□□□□ 0.64
TM9SF3-201ENST00000371142 HSPB7Q9UBY9 170 aa19.08■□□□□ 0.64
TM9SF3-201ENST00000371142 IGLV1-36A0A0B4J1U3 117 aa19.07■□□□□ 0.64
TM9SF3-201ENST00000371142 H7C2G1 150 aa19.07■□□□□ 0.64
TM9SF3-201ENST00000371142 ZNF658BQ4V348 819 aaPredicted RBP19.07■□□□□ 0.64
TM9SF3-201ENST00000371142 PGPA6NDG6 321 aa19.07■□□□□ 0.64
TM9SF3-201ENST00000371142 ERGP11308 486 aa19.07■□□□□ 0.64
TM9SF3-201ENST00000371142 FGF5P12034 268 aa19.07■□□□□ 0.64
TM9SF3-201ENST00000371142 LHFPL6Q9Y693 200 aa19.07■□□□□ 0.64
TM9SF3-201ENST00000371142 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.07■□□□□ 0.64
TM9SF3-201ENST00000371142 C4orf51C9J302 202 aa19.07■□□□□ 0.64
TM9SF3-201ENST00000371142 FCGR2BP31994 310 aaPredicted RBP19.07■□□□□ 0.64
TM9SF3-201ENST00000371142 FAM3BP58499 235 aaPredicted RBP19.07■□□□□ 0.64
TM9SF3-201ENST00000371142 SHISA5Q8N114 240 aa19.07■□□□□ 0.64
TM9SF3-201ENST00000371142 ARL6IP6Q8N6S5 226 aa19.07■□□□□ 0.64
TM9SF3-201ENST00000371142 ADIPOR1Q96A54 375 aa19.07■□□□□ 0.64
TM9SF3-201ENST00000371142 SRXN1Q9BYN0 137 aa19.07■□□□□ 0.64
TM9SF3-201ENST00000371142 REG1AP05451 166 aa19.07■□□□□ 0.64
TM9SF3-201ENST00000371142 KLK2P20151 261 aa19.07■□□□□ 0.64
TM9SF3-201ENST00000371142 A8MWL6 223 aa19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 SLC25A17O43808 307 aa19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 HOXD4P09016 255 aaPredicted RBP19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 STAG3L2P0CL84 134 aa19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 TMPRSS3P57727 454 aa19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 UNC119Q13432 240 aa19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 C19orf54Q5BKX5 351 aa19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 GPR146Q96CH1 333 aa19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 ZDHHC8Q9ULC8 765 aa19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 LAMB2P55268 1798 aa19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 MIA3Q5JRA6 1907 aa19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 SPAG17Q6Q759 2223 aa19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 C7orf66A4D0T2 115 aa19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 M0QZK8 103 aa19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 GGCTO75223 188 aaKnown RBP19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 EIF3GO75821 320 aaKnown RBP eCLIP19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 SIPA1L3O60292 1781 aaPredicted RBP19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 PKIAP61925 76 aa19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 DLL3Q9NYJ7 618 aa19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 CALYQ9NYX4 217 aa19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 CA2P00918 260 aa19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 RND2P52198 227 aa19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 FGFRL1Q8N441 504 aa19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 NRIP2Q9BQI9 281 aa19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 P2RY4P51582 365 aa19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 LY6EQ16553 131 aa19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 GPR132Q9UNW8 380 aa19.06■□□□□ 0.64
TM9SF3-201ENST00000371142 PTPRZ1P23471 2315 aaPredicted RBP19.05■□□□□ 0.64
TM9SF3-201ENST00000371142 CTSSP25774 331 aa19.05■□□□□ 0.64
TM9SF3-201ENST00000371142 LBHQ53QV2 105 aaPredicted RBP19.05■□□□□ 0.64
TM9SF3-201ENST00000371142 SELENOHQ8IZQ5 122 aaKnown RBP19.05■□□□□ 0.64
TM9SF3-201ENST00000371142 TLNRD1Q9H1K6 362 aa19.05■□□□□ 0.64
TM9SF3-201ENST00000371142 ELF5Q9UKW6 265 aaPredicted RBP19.05■□□□□ 0.64
TM9SF3-201ENST00000371142 FBLL1A6NHQ2 334 aaKnown RBP19.05■□□□□ 0.64
TM9SF3-201ENST00000371142 KBTBD11O94819 623 aa19.05■□□□□ 0.64
TM9SF3-201ENST00000371142 RAB37Q96AX2 223 aa19.05■□□□□ 0.64
TM9SF3-201ENST00000371142 RHOVQ96L33 236 aa19.05■□□□□ 0.64
TM9SF3-201ENST00000371142 PGLYRP4Q96LB8 373 aa19.05■□□□□ 0.64
TM9SF3-201ENST00000371142 IGKV3D-11A0A0A0MRZ8 115 aa19.05■□□□□ 0.64
TM9SF3-201ENST00000371142 ZIC3O60481 467 aa19.05■□□□□ 0.64
TM9SF3-201ENST00000371142 IGKV3-11P04433 115 aa19.05■□□□□ 0.64
TM9SF3-201ENST00000371142 HKR1P10072 659 aa19.05■□□□□ 0.64
TM9SF3-201ENST00000371142 OR52M1Q8NGK5 317 aa19.05■□□□□ 0.64
TM9SF3-201ENST00000371142 TP53RKQ96S44 253 aa19.05■□□□□ 0.64
TM9SF3-201ENST00000371142 HS3ST3B1Q9Y662 390 aa19.05■□□□□ 0.64
TM9SF3-201ENST00000371142 DSPPQ9NZW4 1301 aa19.05■□□□□ 0.64
TM9SF3-201ENST00000371142 SYT8Q8NBV8 401 aa19.05■□□□□ 0.64
TM9SF3-201ENST00000371142 TUBD1Q9UJT1 453 aa19.05■□□□□ 0.64
TM9SF3-201ENST00000371142 UQCRFS1P47985 274 aa19.04■□□□□ 0.64
TM9SF3-201ENST00000371142 CKS2P33552 79 aa19.04■□□□□ 0.64
TM9SF3-201ENST00000371142 AMMECR1LQ6DCA0 310 aa19.04■□□□□ 0.64
TM9SF3-201ENST00000371142 PET117Q6UWS5 81 aa19.04■□□□□ 0.64
TM9SF3-201ENST00000371142 TMEM229AB2RXF0 380 aa19.04■□□□□ 0.64
TM9SF3-201ENST00000371142 ISG15P05161 165 aa19.04■□□□□ 0.64
TM9SF3-201ENST00000371142 HSPB9Q9BQS6 159 aa19.04■□□□□ 0.64
TM9SF3-201ENST00000371142 MMD2Q8IY49 270 aa19.04■□□□□ 0.64
TM9SF3-201ENST00000371142 FAM206AQ9NX38 181 aa19.04■□□□□ 0.64
TM9SF3-201ENST00000371142 A0A1W2PS18 150 aa19.04■□□□□ 0.64
TM9SF3-201ENST00000371142 PQLC2Q6ZP29 291 aa19.04■□□□□ 0.64
TM9SF3-201ENST00000371142 SAP25Q8TEE9 199 aa19.04■□□□□ 0.64
TM9SF3-201ENST00000371142 ZNF430Q9H8G1 570 aaPredicted RBP19.04■□□□□ 0.64
TM9SF3-201ENST00000371142 hCG_38984A0A1B0GV85 526 aa19.03■□□□□ 0.64
TM9SF3-201ENST00000371142 ODAMA1E959 279 aa19.03■□□□□ 0.64
TM9SF3-201ENST00000371142 COMPP49747 757 aaPredicted RBP19.03■□□□□ 0.64
TM9SF3-201ENST00000371142 FAM53AQ6NSI3 398 aaPredicted RBP19.03■□□□□ 0.64
TM9SF3-201ENST00000371142 AQP3Q92482 292 aa19.03■□□□□ 0.64
TM9SF3-201ENST00000371142 WNT2BQ93097 391 aa19.03■□□□□ 0.64
TM9SF3-201ENST00000371142 TMEM56-RWDD3S4R434 201 aa19.03■□□□□ 0.64
TM9SF3-201ENST00000371142 HAX1O00165 279 aa19.03■□□□□ 0.64
TM9SF3-201ENST00000371142 GCM2O75603 506 aaPredicted RBP19.03■□□□□ 0.64
TM9SF3-201ENST00000371142 COX6A1P12074 109 aa19.03■□□□□ 0.64
TM9SF3-201ENST00000371142 OR4B1Q8NGF8 309 aa19.03■□□□□ 0.64
TM9SF3-201ENST00000371142 PILRBQ9UKJ0 227 aa19.03■□□□□ 0.64
TM9SF3-201ENST00000371142 TAF15Q92804 592 aaKnown RBP eCLIP19.03■□□□□ 0.64
TM9SF3-201ENST00000371142 MPDU1O75352 247 aa19.03■□□□□ 0.64
TM9SF3-201ENST00000371142 FXYD3Q14802 87 aa19.03■□□□□ 0.64
TM9SF3-201ENST00000371142 KLF14Q8TD94 323 aaPredicted RBP19.03■□□□□ 0.64
TM9SF3-201ENST00000371142 KCNE5Q9UJ90 142 aa19.03■□□□□ 0.64
TM9SF3-201ENST00000371142 PPIAL4CA0A0B4J2A2 164 aa19.02■□□□□ 0.64
TM9SF3-201ENST00000371142 PPIAL4GP0DN37 164 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms