RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 OR1D5P58170 312 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 GTSCR1Q86UQ5 136 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 PPDPFLQ8WWR9 84 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 TIMP4Q99727 224 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 IGHV2-70DA0A0C4DH43 119 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 MYOD1P15172 320 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 FAHP16930 419 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 DEFB104AQ8WTQ1 72 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 TRGV10A0A0A0MS01 117 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 LSM11P83369 360 aaKnown RBP eCLIP3.25□□□□□ -1.89
SYNE1-207ENST00000367255 GAGE2BQ13066 116 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 KIAA0040Q15053 153 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 GAGE2EQ4V326 116 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 FAAP20Q6NZ36 180 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 RHOVQ96L33 236 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 PRRG4Q9BZD6 226 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 OR2J1Q9GZK6 312 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 RBPJLQ9UBG7 517 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 GAGE2DQ9UEU5 116 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 PPLO60437 1756 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 H0YIZ8 118 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 RRHO14718 337 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 KLF4O43474 513 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 OR11H6Q8NGC7 330 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 PHOSPHO1Q8TCT1 267 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 MUCL1Q96DR8 90 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 ASCL2Q99929 193 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 SLC39A5Q6ZMH5 540 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 RBMXL3Q8N7X1 1067 aaKnown RBP3.25□□□□□ -1.89
SYNE1-207ENST00000367255 C8orf31Q8N9H6 132 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 OR8A1Q8NGG7 326 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 DXOO77932 396 aaKnown RBP3.25□□□□□ -1.89
SYNE1-207ENST00000367255 IGLV3-21P80748 117 aaPredicted RBP3.25□□□□□ -1.89
SYNE1-207ENST00000367255 MDP1Q86V88 176 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 TMEM178AQ8NBL3 297 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 BCE1O60756 84 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 SOX8P57073 446 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 ZNF645Q8N7E2 425 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 ZNF502Q8TBZ5 544 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 SCARF2Q96GP6 870 aaPredicted RBP3.25□□□□□ -1.89
SYNE1-207ENST00000367255 ZNF48Q96MX3 618 aaPredicted RBP3.25□□□□□ -1.89
SYNE1-207ENST00000367255 OR7C1O76099 320 aaPredicted RBP3.25□□□□□ -1.89
SYNE1-207ENST00000367255 CRYAAP02489 173 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 NPPBP16860 134 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 SLC38A11Q08AI6 406 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 NNATQ16517 81 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 C1orf210Q8IVY1 113 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 SNX22Q96L94 193 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 Q6ZNB5 142 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 PDFQ9HBH1 243 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 NPIPB6E9PJ23 425 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 SNAI1O95863 264 aaPredicted RBP3.25□□□□□ -1.89
SYNE1-207ENST00000367255 MRPL14Q6P1L8 145 aaKnown RBP3.25□□□□□ -1.89
SYNE1-207ENST00000367255 OR51G1Q8NGK1 321 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 DLX4Q92988 240 aaPredicted RBP3.25□□□□□ -1.89
SYNE1-207ENST00000367255 ZFP64Q9NPA5 681 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 LOXL2Q9Y4K0 774 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 RBP4P02753 201 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 RTN4RL2Q86UN3 420 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 CACNA1EQ15878 2313 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 ANAPC10Q9UM13 185 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 TMEM235A6NFC5 223 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 PYCARD-AS1I3L0S3 204 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 HOXD9P28356 352 aaPredicted RBP3.25□□□□□ -1.89
SYNE1-207ENST00000367255 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.25□□□□□ -1.89
SYNE1-207ENST00000367255 OR5C1Q8NGR4 320 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 TNFRSF13CQ96RJ3 184 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 CRYM-AS1A6NIL9 109 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 MRPL53Q96EL3 112 aaKnown RBP3.25□□□□□ -1.89
SYNE1-207ENST00000367255 IL36RNQ9UBH0 155 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 CCL27Q9Y4X3 112 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 CRYBG1Q9Y4K1 1723 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 OR2T6Q8NHC8 308 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 SLC25A39Q9BZJ4 359 aaPredicted RBP3.25□□□□□ -1.89
SYNE1-207ENST00000367255 MRPS2Q9Y399 296 aaKnown RBP3.25□□□□□ -1.89
SYNE1-207ENST00000367255 SCN4AP35499 1836 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 GVINP1Q7Z2Y8 2422 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 TIMP2P16035 220 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 HOXA11P31270 313 aaPredicted RBP3.25□□□□□ -1.89
SYNE1-207ENST00000367255 TMEM258P61165 79 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 KLF17Q5JT82 389 aaPredicted RBP3.25□□□□□ -1.89
SYNE1-207ENST00000367255 C9orf152Q5JTZ5 239 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 WDR13Q9H1Z4 485 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 DNAJB12Q9NXW2 375 aaKnown RBP3.25□□□□□ -1.89
SYNE1-207ENST00000367255 HCSTQ9UBK5 93 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 SMIM13P0DJ93 91 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 PSG6Q00889 435 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 TNFRSF9Q07011 255 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 Q5BKY6 102 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 ANKRD37Q7Z713 158 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 OR10S1Q8NGN2 331 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 VSTM2LQ96N03 204 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 SCN7AQ01118 1682 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 ACACBO00763 2458 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 SIGLEC15Q6ZMC9 328 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 ORMDL3Q8N138 153 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 DSCR4P56555 118 aaPredicted RBP3.25□□□□□ -1.89
SYNE1-207ENST00000367255 IFI27L1Q96BM0 104 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 TOPAZ1Q8N9V7 1692 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 C2orf68Q2NKX9 166 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms