RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 PAX5Q02548 391 aa11.48□□□□□ -0.57
PRKN-205ENST00000366897 SLC10A1Q14973 349 aa11.48□□□□□ -0.57
PRKN-205ENST00000366897 COLCA1Q6ZS62 124 aa11.48□□□□□ -0.57
PRKN-205ENST00000366897 FAM58AQ8N1B3 248 aa11.48□□□□□ -0.57
PRKN-205ENST00000366897 TMEM256Q8N2U0 113 aa11.48□□□□□ -0.57
PRKN-205ENST00000366897 ZDHHC16Q969W1 377 aa11.48□□□□□ -0.57
PRKN-205ENST00000366897 DERL1Q9BUN8 251 aa11.48□□□□□ -0.57
PRKN-205ENST00000366897 TMEM9BQ9NQ34 198 aa11.48□□□□□ -0.57
PRKN-205ENST00000366897 KNTC1P50748 2209 aa11.48□□□□□ -0.57
PRKN-205ENST00000366897 FAM90A10PA6NDY2 464 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 FAM90A18PA6NE21 464 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 FAM90A16PA6NEW6 464 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 FAM90A20PA6NIJ5 464 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 FAM90A8PA6NJQ4 464 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 FAM90A7PA6NKC0 464 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 FAM90A22PA8MWA6 464 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 FAM90A12PA8MX19 464 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 FAM90A5PA8MXJ8 464 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 FAM90A23PA8MXZ1 464 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 TGOLN2O43493 480 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 NUPR1O60356 82 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 SCGB1D1O95968 90 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 FAM90A15PP0C7V4 464 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 FAM90A13PP0C7W8 464 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 FAM90A14PP0C7W9 464 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 FAM90A24PP0C7X0 464 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 NPPCP23582 126 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 GCSAMLQ5JQS6 135 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 FAM78BQ5VT40 261 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 TCEAL6Q6IPX3 200 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 TUSC5Q8IXB3 177 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 FGFRL1Q8N441 504 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 OR10G9Q8NGN4 311 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 OR10G7Q8NGN6 311 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 LOXL4Q96JB6 756 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 TECTBQ96PL2 329 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 PYGO2Q9BRQ0 406 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 TMEM204Q9BSN7 226 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 ACTR3CQ9C0K3 210 aaPredicted RBP11.47□□□□□ -0.57
PRKN-205ENST00000366897 TRAPPC2LQ9UL33 140 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 DEGS1O15121 323 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 HRASP01112 189 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 CEBPDP49716 269 aaPredicted RBP11.47□□□□□ -0.57
PRKN-205ENST00000366897 Q0VFX4 171 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 FFAR4Q5NUL3 377 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 DRAM1Q8N682 238 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 OR2T10Q8NGZ9 312 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 RNASEH2CQ8TDP1 164 aaKnown RBP11.47□□□□□ -0.57
PRKN-205ENST00000366897 SNHG12Q9BXW3 62 aa11.47□□□□□ -0.57
PRKN-205ENST00000366897 TFF1P04155 84 aa11.46□□□□□ -0.57
PRKN-205ENST00000366897 SPCS3P61009 180 aa11.46□□□□□ -0.57
PRKN-205ENST00000366897 C3AR1Q16581 482 aa11.46□□□□□ -0.57
PRKN-205ENST00000366897 DNLZQ5SXM8 178 aa11.46□□□□□ -0.57
PRKN-205ENST00000366897 TP53TG5Q9Y2B4 290 aa11.46□□□□□ -0.57
PRKN-205ENST00000366897 B4E171 279 aa11.46□□□□□ -0.57
PRKN-205ENST00000366897 FGF5P12034 268 aa11.46□□□□□ -0.57
PRKN-205ENST00000366897 CEACAM6P40199 344 aa11.46□□□□□ -0.57
PRKN-205ENST00000366897 MPLP40238 635 aa11.46□□□□□ -0.57
PRKN-205ENST00000366897 TSPAN7P41732 249 aa11.46□□□□□ -0.57
PRKN-205ENST00000366897 RIPPLY2Q5TAB7 128 aa11.46□□□□□ -0.57
PRKN-205ENST00000366897 CST9LP1Q5W188 147 aa11.46□□□□□ -0.57
PRKN-205ENST00000366897 SPINK14Q6IE38 97 aa11.46□□□□□ -0.57
PRKN-205ENST00000366897 TCF23Q7RTU1 214 aa11.46□□□□□ -0.57
PRKN-205ENST00000366897 TMEM170AQ8WVE7 144 aa11.46□□□□□ -0.57
PRKN-205ENST00000366897 RBMXL2O75526 392 aaKnown RBP11.46□□□□□ -0.58
PRKN-205ENST00000366897 OR1L1Q8NH94 360 aa11.46□□□□□ -0.58
PRKN-205ENST00000366897 PINX1Q96BK5 328 aaKnown RBP11.46□□□□□ -0.58
PRKN-205ENST00000366897 MRPL37Q9BZE1 423 aaKnown RBP11.46□□□□□ -0.58
PRKN-205ENST00000366897 ZG16O60844 167 aa11.45□□□□□ -0.58
PRKN-205ENST00000366897 NUTF2P61970 127 aaKnown RBP11.45□□□□□ -0.58
PRKN-205ENST00000366897 PLA2G2CQ5R387 149 aa11.45□□□□□ -0.58
PRKN-205ENST00000366897 FIP1L1Q6UN15 594 aaKnown RBP11.45□□□□□ -0.58
PRKN-205ENST00000366897 BTNL3Q6UXE8 466 aa11.45□□□□□ -0.58
PRKN-205ENST00000366897 DBX2Q6ZNG2 339 aa11.45□□□□□ -0.58
PRKN-205ENST00000366897 IFI44Q8TCB0 444 aa11.45□□□□□ -0.58
PRKN-205ENST00000366897 NEU1Q99519 415 aa11.45□□□□□ -0.58
PRKN-205ENST00000366897 HES7Q9BYE0 225 aa11.45□□□□□ -0.58
PRKN-205ENST00000366897 WDR54Q9H977 334 aa11.45□□□□□ -0.58
PRKN-205ENST00000366897 ZNF320A2RRD8 509 aa11.45□□□□□ -0.58
PRKN-205ENST00000366897 C1QTNF9P0C862 333 aa11.45□□□□□ -0.58
PRKN-205ENST00000366897 IL3RAP26951 378 aa11.45□□□□□ -0.58
PRKN-205ENST00000366897 RPL30P62888 115 aaKnown RBP11.45□□□□□ -0.58
PRKN-205ENST00000366897 TNFRSF9Q07011 255 aa11.45□□□□□ -0.58
PRKN-205ENST00000366897 ACTL10Q5JWF8 245 aa11.45□□□□□ -0.58
PRKN-205ENST00000366897 ZNF114Q8NC26 417 aa11.45□□□□□ -0.58
PRKN-205ENST00000366897 LSM10Q969L4 123 aaKnown RBP11.45□□□□□ -0.58
PRKN-205ENST00000366897 TMEM18Q96B42 140 aa11.45□□□□□ -0.58
PRKN-205ENST00000366897 NOL4LQ96MY1 436 aaPredicted RBP11.45□□□□□ -0.58
PRKN-205ENST00000366897 OR6C3Q9NZP0 311 aa11.45□□□□□ -0.58
PRKN-205ENST00000366897 TRAV38-1A0A0B4J264 116 aa11.44□□□□□ -0.58
PRKN-205ENST00000366897 GRIFINA4D1Z8 144 aa11.44□□□□□ -0.58
PRKN-205ENST00000366897 ATP5G3P48201 142 aa11.44□□□□□ -0.58
PRKN-205ENST00000366897 SRSF7Q16629 238 aaKnown RBP eCLIP11.44□□□□□ -0.58
PRKN-205ENST00000366897 OR2Y1Q8NGV0 311 aa11.44□□□□□ -0.58
PRKN-205ENST00000366897 KCNE4Q8WWG9 221 aa11.44□□□□□ -0.58
PRKN-205ENST00000366897 APOBEC3DQ96AK3 386 aaPredicted RBP11.44□□□□□ -0.58
PRKN-205ENST00000366897 PCED1AQ9H1Q7 454 aa11.44□□□□□ -0.58
PRKN-205ENST00000366897 PATE3B3GLJ2 98 aa11.44□□□□□ -0.58
PRKN-205ENST00000366897 SLC25A6P12236 298 aa11.44□□□□□ -0.58
PRKN-205ENST00000366897 GCH1P30793 250 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms