RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 PSG4Q00888 419 aa13.9□□□□□ -0.18
RXRA-201ENST00000356384 CEACAM21Q3KPI0 293 aa13.9□□□□□ -0.18
RXRA-201ENST00000356384 MIC13Q5XKP0 118 aa13.9□□□□□ -0.18
RXRA-201ENST00000356384 ZNF98A6NK75 572 aa13.9□□□□□ -0.18
RXRA-201ENST00000356384 SCTP09683 121 aa13.9□□□□□ -0.18
RXRA-201ENST00000356384 CXCL2P19875 107 aa13.9□□□□□ -0.18
RXRA-201ENST00000356384 UCP2P55851 309 aa13.9□□□□□ -0.18
RXRA-201ENST00000356384 IRF3Q14653 427 aa13.9□□□□□ -0.18
RXRA-201ENST00000356384 FXYD3Q14802 87 aa13.9□□□□□ -0.18
RXRA-201ENST00000356384 TUBD1Q9UJT1 453 aa13.9□□□□□ -0.18
RXRA-201ENST00000356384 DLL1O00548 723 aa13.89□□□□□ -0.19
RXRA-201ENST00000356384 SIGLEC5O15389 551 aa13.89□□□□□ -0.19
RXRA-201ENST00000356384 ANOS1P23352 680 aa13.89□□□□□ -0.19
RXRA-201ENST00000356384 ZFP36L2P47974 494 aaKnown RBP13.89□□□□□ -0.19
RXRA-201ENST00000356384 SIGLEC14Q08ET2 396 aa13.89□□□□□ -0.19
RXRA-201ENST00000356384 CHODLQ9H9P2 273 aa13.89□□□□□ -0.19
RXRA-201ENST00000356384 H0Y980 276 aa13.89□□□□□ -0.19
RXRA-201ENST00000356384 MPDU1O75352 247 aa13.89□□□□□ -0.19
RXRA-201ENST00000356384 IL11P20809 199 aa13.89□□□□□ -0.19
RXRA-201ENST00000356384 DLX6P56179 175 aa13.89□□□□□ -0.19
RXRA-201ENST00000356384 CX3CL1P78423 397 aa13.89□□□□□ -0.19
RXRA-201ENST00000356384 TTC32Q5I0X7 151 aa13.89□□□□□ -0.19
RXRA-201ENST00000356384 C12orf54Q6X4T0 127 aa13.89□□□□□ -0.19
RXRA-201ENST00000356384 STPG3Q8N7X2 389 aa13.89□□□□□ -0.19
RXRA-201ENST00000356384 TIMP4Q99727 224 aa13.89□□□□□ -0.19
RXRA-201ENST00000356384 QSER1Q2KHR3 1735 aa13.89□□□□□ -0.19
RXRA-201ENST00000356384 SPAG17Q6Q759 2223 aa13.89□□□□□ -0.19
RXRA-201ENST00000356384 WNT9BO14905 357 aa13.89□□□□□ -0.19
RXRA-201ENST00000356384 SPINT1O43278 529 aa13.89□□□□□ -0.19
RXRA-201ENST00000356384 OR2H2O95918 312 aa13.89□□□□□ -0.19
RXRA-201ENST00000356384 RPL8P62917 257 aaKnown RBP13.89□□□□□ -0.19
RXRA-201ENST00000356384 TMEM177Q53S58 311 aa13.89□□□□□ -0.19
RXRA-201ENST00000356384 ZNF721Q8TF20 911 aa13.89□□□□□ -0.19
RXRA-201ENST00000356384 MRPL18Q9H0U6 180 aaKnown RBP13.89□□□□□ -0.19
RXRA-201ENST00000356384 A0A1W2PPV9 198 aa13.89□□□□□ -0.19
RXRA-201ENST00000356384 MC5RP33032 325 aa13.89□□□□□ -0.19
RXRA-201ENST00000356384 RND2P52198 227 aa13.89□□□□□ -0.19
RXRA-201ENST00000356384 TMEM52Q8NDY8 209 aa13.89□□□□□ -0.19
RXRA-201ENST00000356384 BEX4Q9NWD9 120 aaPredicted RBP13.89□□□□□ -0.19
RXRA-201ENST00000356384 CIRBPQ14011 172 aaKnown RBP13.88□□□□□ -0.19
RXRA-201ENST00000356384 C10orf111Q8N326 155 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 ZNF645Q8N7E2 425 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 MRAP2Q96G30 205 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 PARD6GQ9BYG4 376 aaPredicted RBP13.88□□□□□ -0.19
RXRA-201ENST00000356384 A0A0J9YW62 118 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 A0A1W2PPC1 479 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 CHRNA10Q9GZZ6 450 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 CENPVL1A0A0U1RR11 272 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 hCG_38984A0A1B0GV85 526 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 C7orf71A4D174 169 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 SOD3P08294 240 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 SELENOTP62341 195 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 RFLNBQ8N5W9 214 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 SMDT1Q9H4I9 107 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 MBD1Q9UIS9 605 aaPredicted RBP13.88□□□□□ -0.19
RXRA-201ENST00000356384 CD160O95971 181 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 FGF12P61328 243 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 MEF2BQ02080 365 aaPredicted RBP13.88□□□□□ -0.19
RXRA-201ENST00000356384 ITLN1Q8WWA0 313 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 DIRC2Q96SL1 478 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 HLA-DQA1P01909 254 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 AMY1AP04745 511 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 MPV17P39210 176 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 PMCHL1Q16048 86 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 ZNF826PQ6ZT77 177 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 GCSAMQ8N6F7 178 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 OR10S1Q8NGN2 331 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 OR1P1Q8NH06 330 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 LHFPL5Q8TAF8 219 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 NINQ8N4C6 2090 aa13.88□□□□□ -0.19
RXRA-201ENST00000356384 RAX2Q96IS3 184 aa13.87□□□□□ -0.19
RXRA-201ENST00000356384 ZNF430Q9H8G1 570 aaPredicted RBP13.87□□□□□ -0.19
RXRA-201ENST00000356384 SIRT4Q9Y6E7 314 aaPredicted RBP13.87□□□□□ -0.19
RXRA-201ENST00000356384 A0A1W2PP11 408 aa13.87□□□□□ -0.19
RXRA-201ENST00000356384 FAM74A4Q5TZK3 123 aa13.87□□□□□ -0.19
RXRA-201ENST00000356384 FAM27BQ5VT28 67 aa13.87□□□□□ -0.19
RXRA-201ENST00000356384 APC2O95996 2303 aa13.87□□□□□ -0.19
RXRA-201ENST00000356384 ZNF658BQ4V348 819 aaPredicted RBP13.87□□□□□ -0.19
RXRA-201ENST00000356384 ERASQ7Z444 233 aa13.87□□□□□ -0.19
RXRA-201ENST00000356384 SRSF12Q8WXF0 261 aaKnown RBP13.87□□□□□ -0.19
RXRA-201ENST00000356384 WDR54Q9H977 334 aa13.87□□□□□ -0.19
RXRA-201ENST00000356384 TGIF2-C20orf24A0A0A6YYL0 155 aa13.87□□□□□ -0.19
RXRA-201ENST00000356384 ZIC3O60481 467 aa13.87□□□□□ -0.19
RXRA-201ENST00000356384 CLPPQ16740 277 aaPredicted RBP13.87□□□□□ -0.19
RXRA-201ENST00000356384 TMEM45BQ96B21 275 aa13.87□□□□□ -0.19
RXRA-201ENST00000356384 HAX1O00165 279 aa13.86□□□□□ -0.19
RXRA-201ENST00000356384 UNC119Q13432 240 aa13.86□□□□□ -0.19
RXRA-201ENST00000356384 MS4A3Q96HJ5 214 aa13.86□□□□□ -0.19
RXRA-201ENST00000356384 TMEM222Q9H0R3 208 aa13.86□□□□□ -0.19
RXRA-201ENST00000356384 ALX4Q9H161 411 aaPredicted RBP13.86□□□□□ -0.19
RXRA-201ENST00000356384 PARLQ9H300 379 aa13.86□□□□□ -0.19
RXRA-201ENST00000356384 H3BTX0 84 aa13.86□□□□□ -0.19
RXRA-201ENST00000356384 CXorf66Q5JRM2 361 aaPredicted RBP13.86□□□□□ -0.19
RXRA-201ENST00000356384 SLC25A34Q6PIV7 304 aa13.86□□□□□ -0.19
RXRA-201ENST00000356384 OR13C6PQ8NH95 151 aa13.86□□□□□ -0.19
RXRA-201ENST00000356384 RHOVQ96L33 236 aa13.86□□□□□ -0.19
RXRA-201ENST00000356384 GPR82Q96P67 336 aa13.86□□□□□ -0.19
RXRA-201ENST00000356384 WNT5BQ9H1J7 359 aa13.86□□□□□ -0.19
RXRA-201ENST00000356384 COLQQ9Y215 455 aaPredicted RBP13.86□□□□□ -0.19
RXRA-201ENST00000356384 EIF3GO75821 320 aaKnown RBP eCLIP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms