RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 NPFFO15130 113 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 SPINT1O43278 529 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 CD160O95971 181 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 PPP1R17O96001 155 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 PPIAL4GP0DN37 164 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 TFF2Q03403 129 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 FHL5Q5TD97 284 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 SLC25A47Q6Q0C1 308 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 ISOC2Q96AB3 205 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 RBM38Q9H0Z9 239 aaKnown RBP5.58□□□□□ -1.52
UPF2-201ENST00000356352 CALYQ9NYX4 217 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 ANKRD12Q6UB98 2062 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 LOC105371242A0A075B767 164 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 TSPAN2O60636 221 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 IGHV4-34P06331 123 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 TFPI2P48307 235 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 NUTF2P61970 127 aaKnown RBP5.58□□□□□ -1.52
UPF2-201ENST00000356352 ZNF146Q15072 292 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 SGK494Q96LW2 274 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 KIR2DL4Q99706 377 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 CCL19Q99731 98 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 QTRT1Q9BXR0 403 aaKnown RBP5.58□□□□□ -1.52
UPF2-201ENST00000356352 CFHR5Q9BXR6 569 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 TRBV5-5A0A0J9YX44 114 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 NPIPB11E5RHQ5 1161 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 PTGDSP41222 190 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 HSPE1P61604 102 aaKnown RBP5.58□□□□□ -1.52
UPF2-201ENST00000356352 PLAURQ03405 335 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 SAMD13Q5VXD3 122 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 SPNS2Q8IVW8 549 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 TMEM101Q96IK0 257 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 PRSS27Q9BQR3 290 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 CLEC7AQ9BXN2 247 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 DNAJC4Q9NNZ3 241 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 CCL27Q9Y4X3 112 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 KIAA1551Q9HCM1 1747 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 B9A039 149 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 C1QAP02745 245 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 PF4P02776 101 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 LIPFP07098 398 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 C8orf88P0DMB2 117 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 MEIG1Q5JSS6 88 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 UNQ9370/PRO34162Q6UXP9 181 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 MTURNQ8N3F0 131 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 OR4C13Q8NGP0 309 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 ZCCHC14Q8WYQ9 949 aaKnown RBP5.58□□□□□ -1.52
UPF2-201ENST00000356352 DCTN5Q9BTE1 182 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 MRPS18BQ9Y676 258 aaKnown RBP5.58□□□□□ -1.52
UPF2-201ENST00000356352 PGPA6NDG6 321 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 GPX1P07203 203 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 ZNF25P17030 456 aaPredicted RBP5.58□□□□□ -1.52
UPF2-201ENST00000356352 MEF2BQ02080 365 aaPredicted RBP5.58□□□□□ -1.52
UPF2-201ENST00000356352 MGAT2Q10469 447 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 C2orf83Q53S99 150 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 RIPPLY2Q5TAB7 128 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 TMEM91Q6ZNR0 172 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 CBLN2Q8IUK8 224 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 GUCD1Q96NT3 240 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 HIST1H4GQ99525 98 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 GPR61Q9BZJ8 451 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 PAM16Q9Y3D7 125 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 ECM29Q5VYK3 1845 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 RGPD4Q7Z3J3 1758 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 A0A1W2PQF6 199 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 ODAMA1E959 279 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 GAGE10A6NGK3 116 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 TMEM229AB2RXF0 380 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 HYAL3O43820 417 aaPredicted RBP5.57□□□□□ -1.52
UPF2-201ENST00000356352 PGLYRP1O75594 196 aaPredicted RBP5.57□□□□□ -1.52
UPF2-201ENST00000356352 GHRHP01286 108 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 CXCL3P19876 107 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 NPPCP23582 126 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 CDX1P47902 265 aaPredicted RBP5.57□□□□□ -1.52
UPF2-201ENST00000356352 SPATA45Q537H7 98 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 SAPCD1Q5SSQ6 148 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 OR4A47Q6IF82 309 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 ZAR1Q86SH2 424 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 OR10AG1Q8NH19 301 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 TRAF4Q9BUZ4 470 aaPredicted RBP5.57□□□□□ -1.52
UPF2-201ENST00000356352 OR51M1Q9H341 326 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 GEMIN7Q9H840 131 aaKnown RBP5.57□□□□□ -1.52
UPF2-201ENST00000356352 C7orf66A4D0T2 115 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 LEPROTL1O95214 131 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 STAG3L3P0CL85 134 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 FCGR2BP31994 310 aaPredicted RBP5.57□□□□□ -1.52
UPF2-201ENST00000356352 HINT1P49773 126 aaPredicted RBP5.57□□□□□ -1.52
UPF2-201ENST00000356352 KLRB1Q12918 225 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 TMEM252Q8N6L7 170 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 TAF15Q92804 592 aaKnown RBP eCLIP5.57□□□□□ -1.52
UPF2-201ENST00000356352 DPH3Q96FX2 82 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 ZNF488Q96MN9 340 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 KCNK17Q96T54 332 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 HDHD3Q9BSH5 251 aaPredicted RBP5.57□□□□□ -1.52
UPF2-201ENST00000356352 GP6Q9HCN6 339 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 GLI3P10071 1580 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 A0A1W2PQM1 296 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 CXorf65A6NEN9 183 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 NDUFB4O95168 129 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 IGHMP01871 453 aa5.57□□□□□ -1.52
UPF2-201ENST00000356352 RND2P52198 227 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms