RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 RELBQ01201 579 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 TMEM222Q9H0R3 208 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 RBKSQ9H477 322 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 RND2P52198 227 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 H1FOOQ8IZA3 346 aaPredicted RBP15.51■□□□□ 0.07
COL18A1-202ENST00000355480 STPG2Q8N412 459 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 FAM181AQ8N9Y4 354 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 TNFSF18Q9UNG2 199 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 NINQ8N4C6 2090 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 FAM90A10PA6NDY2 464 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 FAM90A18PA6NE21 464 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 FAM90A16PA6NEW6 464 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 FAM90A20PA6NIJ5 464 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 FAM90A8PA6NJQ4 464 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 FAM90A7PA6NKC0 464 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 FAM90A22PA8MWA6 464 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 FAM90A12PA8MX19 464 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 FAM90A5PA8MXJ8 464 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 FAM90A23PA8MXZ1 464 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 SYNGR3O43761 229 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 FAM90A15PP0C7V4 464 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 FAM90A13PP0C7W8 464 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 FAM90A14PP0C7W9 464 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 FAM90A24PP0C7X0 464 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 MFAP2P55001 183 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 MFAP4P55083 255 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 TRIP12Q14669 1992 aaPredicted RBP15.51■□□□□ 0.07
COL18A1-202ENST00000355480 IGHV1-69-2A0A0G2JMI3 117 aa15.5■□□□□ 0.07
COL18A1-202ENST00000355480 PRSS53Q2L4Q9 553 aa15.5■□□□□ 0.07
COL18A1-202ENST00000355480 TRBV5-5A0A0J9YX44 114 aa15.5■□□□□ 0.07
COL18A1-202ENST00000355480 FCGR2BP31994 310 aaPredicted RBP15.5■□□□□ 0.07
COL18A1-202ENST00000355480 LEAP2Q969E1 77 aa15.5■□□□□ 0.07
COL18A1-202ENST00000355480 SMIM12Q96EX1 92 aa15.5■□□□□ 0.07
COL18A1-202ENST00000355480 RSG1Q9BU20 258 aa15.5■□□□□ 0.07
COL18A1-202ENST00000355480 FAM181BA6NEQ2 426 aa15.5■□□□□ 0.07
COL18A1-202ENST00000355480 OR4C46A6NHA9 309 aa15.5■□□□□ 0.07
COL18A1-202ENST00000355480 RIPPLY2Q5TAB7 128 aa15.5■□□□□ 0.07
COL18A1-202ENST00000355480 BPIFA4PQ86YQ2 179 aa15.5■□□□□ 0.07
COL18A1-202ENST00000355480 LINC01560Q8TB33 94 aa15.5■□□□□ 0.07
COL18A1-202ENST00000355480 TBX15Q96SF7 602 aa15.5■□□□□ 0.07
COL18A1-202ENST00000355480 RTN4RQ9BZR6 473 aa15.5■□□□□ 0.07
COL18A1-202ENST00000355480 HSF4Q9ULV5 492 aa15.5■□□□□ 0.07
COL18A1-202ENST00000355480 IGHV3OR16-10A0A075B7F0 116 aa15.5■□□□□ 0.07
COL18A1-202ENST00000355480 MMP9P14780 707 aa15.5■□□□□ 0.07
COL18A1-202ENST00000355480 SSTR5P35346 364 aa15.5■□□□□ 0.07
COL18A1-202ENST00000355480 ZNF345Q14585 488 aa15.5■□□□□ 0.07
COL18A1-202ENST00000355480 DCTN5Q9BTE1 182 aa15.5■□□□□ 0.07
COL18A1-202ENST00000355480 LAMB2P55268 1798 aa15.5■□□□□ 0.07
COL18A1-202ENST00000355480 C4orf51C9J302 202 aa15.5■□□□□ 0.07
COL18A1-202ENST00000355480 MPDU1O75352 247 aa15.5■□□□□ 0.07
COL18A1-202ENST00000355480 MUC15Q8N387 334 aa15.5■□□□□ 0.07
COL18A1-202ENST00000355480 GDF15Q99988 308 aa15.5■□□□□ 0.07
COL18A1-202ENST00000355480 ALX4Q9H161 411 aaPredicted RBP15.5■□□□□ 0.07
COL18A1-202ENST00000355480 IFT22Q9H7X7 185 aa15.5■□□□□ 0.07
COL18A1-202ENST00000355480 ZNF430Q9H8G1 570 aaPredicted RBP15.5■□□□□ 0.07
COL18A1-202ENST00000355480 HSPB7Q9UBY9 170 aa15.5■□□□□ 0.07
COL18A1-202ENST00000355480 PGLYRP1O75594 196 aaPredicted RBP15.49■□□□□ 0.07
COL18A1-202ENST00000355480 ISG15P05161 165 aa15.49■□□□□ 0.07
COL18A1-202ENST00000355480 BCL2P10415 239 aa15.49■□□□□ 0.07
COL18A1-202ENST00000355480 CBY1Q9Y3M2 126 aa15.49■□□□□ 0.07
COL18A1-202ENST00000355480 KIAA1217Q5T5P2 1943 aa15.49■□□□□ 0.07
COL18A1-202ENST00000355480 A8MWL6 223 aa15.49■□□□□ 0.07
COL18A1-202ENST00000355480 TMEM252Q8N6L7 170 aa15.49■□□□□ 0.07
COL18A1-202ENST00000355480 RAX2Q96IS3 184 aa15.49■□□□□ 0.07
COL18A1-202ENST00000355480 SMAD7O15105 426 aaKnown RBP15.49■□□□□ 0.07
COL18A1-202ENST00000355480 ZNF324O75467 553 aaPredicted RBP15.49■□□□□ 0.07
COL18A1-202ENST00000355480 FDCSPQ8NFU4 85 aa15.49■□□□□ 0.07
COL18A1-202ENST00000355480 ZNF502Q8TBZ5 544 aa15.49■□□□□ 0.07
COL18A1-202ENST00000355480 NPIPB6E9PJ23 425 aa15.49■□□□□ 0.07
COL18A1-202ENST00000355480 ATP5G2Q06055 141 aa15.49■□□□□ 0.07
COL18A1-202ENST00000355480 UNC119Q13432 240 aa15.49■□□□□ 0.07
COL18A1-202ENST00000355480 SLC16A13Q7RTY0 426 aa15.49■□□□□ 0.07
COL18A1-202ENST00000355480 OR52M1Q8NGK5 317 aa15.49■□□□□ 0.07
COL18A1-202ENST00000355480 OR4C12Q96R67 309 aa15.49■□□□□ 0.07
COL18A1-202ENST00000355480 RPL24P83731 157 aaKnown RBP15.49■□□□□ 0.07
COL18A1-202ENST00000355480 FGFRL1Q8N441 504 aa15.49■□□□□ 0.07
COL18A1-202ENST00000355480 LNP1A1A4G5 178 aa15.48■□□□□ 0.07
COL18A1-202ENST00000355480 BTF3P20290 206 aaKnown RBP15.48■□□□□ 0.07
COL18A1-202ENST00000355480 OR9G1Q8NH87 305 aa15.48■□□□□ 0.07
COL18A1-202ENST00000355480 PGPA6NDG6 321 aa15.48■□□□□ 0.07
COL18A1-202ENST00000355480 ZNF343Q6P1L6 599 aa15.48■□□□□ 0.07
COL18A1-202ENST00000355480 RAB24Q969Q5 203 aa15.48■□□□□ 0.07
COL18A1-202ENST00000355480 OR5AC2Q9NZP5 309 aa15.48■□□□□ 0.07
COL18A1-202ENST00000355480 VSIG10L2P0DP72 767 aa15.48■□□□□ 0.07
COL18A1-202ENST00000355480 GCSHP23434 173 aa15.48■□□□□ 0.07
COL18A1-202ENST00000355480 SGMS2Q8NHU3 365 aa15.48■□□□□ 0.07
COL18A1-202ENST00000355480 H3BVH4 76 aa15.48■□□□□ 0.07
COL18A1-202ENST00000355480 SULT1A2P50226 295 aa15.48■□□□□ 0.07
COL18A1-202ENST00000355480 CENPVQ7Z7K6 275 aaPredicted RBP15.48■□□□□ 0.07
COL18A1-202ENST00000355480 SPSB2Q99619 263 aa15.48■□□□□ 0.07
COL18A1-202ENST00000355480 TIAF1O95411 115 aa15.47■□□□□ 0.07
COL18A1-202ENST00000355480 LIPFP07098 398 aa15.47■□□□□ 0.07
COL18A1-202ENST00000355480 SIGIRRQ6IA17 410 aa15.47■□□□□ 0.07
COL18A1-202ENST00000355480 CLEC7AQ9BXN2 247 aa15.47■□□□□ 0.07
COL18A1-202ENST00000355480 DSPPQ9NZW4 1301 aa15.47■□□□□ 0.07
COL18A1-202ENST00000355480 A0A1W2PR77 199 aa15.47■□□□□ 0.07
COL18A1-202ENST00000355480 COX5BP10606 129 aa15.47■□□□□ 0.07
COL18A1-202ENST00000355480 TCTAP57738 103 aa15.47■□□□□ 0.07
COL18A1-202ENST00000355480 FADS6Q8N9I5 356 aa15.47■□□□□ 0.07
COL18A1-202ENST00000355480 TIMP4Q99727 224 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms