RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 SLC25A45Q8N413 288 aa13.13□□□□□ -0.31
COL11A2-201ENST00000341947 M0QZK8 103 aa13.13□□□□□ -0.31
COL11A2-201ENST00000341947 GGCTO75223 188 aaKnown RBP13.13□□□□□ -0.31
COL11A2-201ENST00000341947 C8orf82Q6P1X6 216 aaPredicted RBP13.13□□□□□ -0.31
COL11A2-201ENST00000341947 KBTBD11O94819 623 aa13.13□□□□□ -0.31
COL11A2-201ENST00000341947 GCGP01275 180 aa13.13□□□□□ -0.31
COL11A2-201ENST00000341947 TSPOP30536 169 aa13.13□□□□□ -0.31
COL11A2-201ENST00000341947 CENPVQ7Z7K6 275 aaPredicted RBP13.13□□□□□ -0.31
COL11A2-201ENST00000341947 CBLN2Q8IUK8 224 aa13.13□□□□□ -0.31
COL11A2-201ENST00000341947 PHLDA3Q9Y5J5 127 aa13.13□□□□□ -0.31
COL11A2-201ENST00000341947 BCORQ6W2J9 1755 aa13.13□□□□□ -0.31
COL11A2-201ENST00000341947 CKS2P33552 79 aa13.13□□□□□ -0.31
COL11A2-201ENST00000341947 ABHD12Q8N2K0 398 aa13.13□□□□□ -0.31
COL11A2-201ENST00000341947 TMEM238LA0A1B0GVL6 79 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 A6NJY4 79 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 SLC25A17O43808 307 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 TP53RKQ96S44 253 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 PRSS27Q9BQR3 290 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 TLNRD1Q9H1K6 362 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 ODAMA1E959 279 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 OR2A4O95047 310 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 PLAUP00749 431 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 RND2P52198 227 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 CX3CL1P78423 397 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 SPRED2Q7Z698 418 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 OR2A7Q96R45 310 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 HSF4Q9ULV5 492 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 COX6CP09669 75 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 RCC1P18754 421 aaPredicted RBP13.12□□□□□ -0.31
COL11A2-201ENST00000341947 RPS20P60866 119 aaKnown RBP13.12□□□□□ -0.31
COL11A2-201ENST00000341947 IBA57Q5T440 356 aaKnown RBP13.12□□□□□ -0.31
COL11A2-201ENST00000341947 RTN4RQ9BZR6 473 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 TMEM222Q9H0R3 208 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 IGKV3D-11A0A0A0MRZ8 115 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 IGKV3-11P04433 115 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 COX6A1P12074 109 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 VN1R17PQ8TDU5 208 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 EEF1AKMT3Q96AZ1 226 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 KCNK17Q96T54 332 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 PGPA6NDG6 321 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 THY1P04216 161 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 ACAA1P09110 424 aaPredicted RBP13.12□□□□□ -0.31
COL11A2-201ENST00000341947 ARF6P62330 175 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 RELQ04864 619 aaPredicted RBP13.12□□□□□ -0.31
COL11A2-201ENST00000341947 ELOVL5Q9NYP7 299 aa13.12□□□□□ -0.31
COL11A2-201ENST00000341947 A0A087X0M5 115 aa13.11□□□□□ -0.31
COL11A2-201ENST00000341947 IGHV1-69-2A0A0G2JMI3 117 aa13.11□□□□□ -0.31
COL11A2-201ENST00000341947 A0A1B0GX30 115 aa13.11□□□□□ -0.31
COL11A2-201ENST00000341947 ANOS1P23352 680 aa13.11□□□□□ -0.31
COL11A2-201ENST00000341947 CXorf66Q5JRM2 361 aaPredicted RBP13.11□□□□□ -0.31
COL11A2-201ENST00000341947 CDCP2Q5VXM1 449 aa13.11□□□□□ -0.31
COL11A2-201ENST00000341947 ZCCHC14Q8WYQ9 949 aaKnown RBP13.11□□□□□ -0.31
COL11A2-201ENST00000341947 GALNT14Q96FL9 552 aa13.11□□□□□ -0.31
COL11A2-201ENST00000341947 CHRNA10Q9GZZ6 450 aa13.11□□□□□ -0.31
COL11A2-201ENST00000341947 CA2P00918 260 aa13.11□□□□□ -0.31
COL11A2-201ENST00000341947 TCTAP57738 103 aa13.11□□□□□ -0.31
COL11A2-201ENST00000341947 SIGIRRQ6IA17 410 aa13.11□□□□□ -0.31
COL11A2-201ENST00000341947 DIRC3C9JPN6 131 aa13.11□□□□□ -0.31
COL11A2-201ENST00000341947 SMAD7O15105 426 aaKnown RBP13.11□□□□□ -0.31
COL11A2-201ENST00000341947 SSTR5P35346 364 aa13.11□□□□□ -0.31
COL11A2-201ENST00000341947 FAM3BP58499 235 aaPredicted RBP13.11□□□□□ -0.31
COL11A2-201ENST00000341947 SGMS2Q8NHU3 365 aa13.11□□□□□ -0.31
COL11A2-201ENST00000341947 KCNK7Q9Y2U2 307 aa13.11□□□□□ -0.31
COL11A2-201ENST00000341947 HS3ST3B1Q9Y662 390 aa13.11□□□□□ -0.31
COL11A2-201ENST00000341947 IGKV1-8A0A0C4DH67 115 aa13.11□□□□□ -0.31
COL11A2-201ENST00000341947 FOXH1O75593 365 aa13.11□□□□□ -0.31
COL11A2-201ENST00000341947 NUDT3O95989 172 aa13.11□□□□□ -0.31
COL11A2-201ENST00000341947 UQCRFS1P47985 274 aa13.11□□□□□ -0.31
COL11A2-201ENST00000341947 RUNX1Q01196 453 aa13.11□□□□□ -0.31
COL11A2-201ENST00000341947 C10orf111Q8N326 155 aa13.11□□□□□ -0.31
COL11A2-201ENST00000341947 OR9G1Q8NH87 305 aa13.11□□□□□ -0.31
COL11A2-201ENST00000341947 RBM38Q9H0Z9 239 aaKnown RBP13.11□□□□□ -0.31
COL11A2-201ENST00000341947 CFDP00746 253 aaPredicted RBP13.11□□□□□ -0.31
COL11A2-201ENST00000341947 RFLNBQ8N5W9 214 aa13.11□□□□□ -0.31
COL11A2-201ENST00000341947 CLEC7AQ9BXN2 247 aa13.11□□□□□ -0.31
COL11A2-201ENST00000341947 LIPFP07098 398 aa13.1□□□□□ -0.31
COL11A2-201ENST00000341947 TGIF1Q15583 401 aa13.1□□□□□ -0.31
COL11A2-201ENST00000341947 RHOVQ96L33 236 aa13.1□□□□□ -0.31
COL11A2-201ENST00000341947 TIMP4Q99727 224 aa13.1□□□□□ -0.31
COL11A2-201ENST00000341947 JPT1Q9UK76 154 aa13.1□□□□□ -0.31
COL11A2-201ENST00000341947 PGLYRP1O75594 196 aaPredicted RBP13.1□□□□□ -0.31
COL11A2-201ENST00000341947 GZMMP51124 257 aa13.1□□□□□ -0.31
COL11A2-201ENST00000341947 KLF14Q8TD94 323 aaPredicted RBP13.1□□□□□ -0.31
COL11A2-201ENST00000341947 POM121Q96HA1 1249 aa13.1□□□□□ -0.31
COL11A2-201ENST00000341947 ALX4Q9H161 411 aaPredicted RBP13.1□□□□□ -0.31
COL11A2-201ENST00000341947 SYNGR3O43761 229 aa13.1□□□□□ -0.31
COL11A2-201ENST00000341947 TMEM30BQ3MIR4 351 aa13.1□□□□□ -0.31
COL11A2-201ENST00000341947 NDUFB4O95168 129 aa13.1□□□□□ -0.31
COL11A2-201ENST00000341947 COPS9Q8WXC6 57 aa13.1□□□□□ -0.31
COL11A2-201ENST00000341947 H7C2G1 150 aa13.1□□□□□ -0.31
COL11A2-201ENST00000341947 TXNDC17Q9BRA2 123 aa13.1□□□□□ -0.31
COL11A2-201ENST00000341947 DLL3Q9NYJ7 618 aa13.1□□□□□ -0.31
COL11A2-201ENST00000341947 GPX1P07203 203 aa13.09□□□□□ -0.31
COL11A2-201ENST00000341947 LSM10Q969L4 123 aaKnown RBP13.09□□□□□ -0.31
COL11A2-201ENST00000341947 QTRT1Q9BXR0 403 aaKnown RBP13.09□□□□□ -0.31
COL11A2-201ENST00000341947 SMDT1Q9H4I9 107 aa13.09□□□□□ -0.31
COL11A2-201ENST00000341947 RAXQ9Y2V3 346 aa13.09□□□□□ -0.31
COL11A2-201ENST00000341947 A0A0B4J293 547 aa13.09□□□□□ -0.31
COL11A2-201ENST00000341947 RPLP1P05386 114 aaKnown RBP13.09□□□□□ -0.31
COL11A2-201ENST00000341947 SNRPD3P62318 126 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms