RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 GNRHRP30968 328 aa14.12□□□□□ -0.15
CHGA-202ENST00000334654 ZNF816Q0VGE8 651 aaPredicted RBP14.12□□□□□ -0.15
CHGA-202ENST00000334654 EIF4EBP1Q13541 118 aaPredicted RBP14.12□□□□□ -0.15
CHGA-202ENST00000334654 MZT2BQ6NZ67 158 aa14.12□□□□□ -0.15
CHGA-202ENST00000334654 Q6ZNX1 250 aa14.12□□□□□ -0.15
CHGA-202ENST00000334654 TMEM17Q86X19 198 aa14.12□□□□□ -0.15
CHGA-202ENST00000334654 DRAM1Q8N682 238 aa14.12□□□□□ -0.15
CHGA-202ENST00000334654 ZNF645Q8N7E2 425 aa14.12□□□□□ -0.15
CHGA-202ENST00000334654 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.12□□□□□ -0.15
CHGA-202ENST00000334654 SECTM1Q8WVN6 248 aa14.12□□□□□ -0.15
CHGA-202ENST00000334654 RTN4IP1Q8WWV3 396 aaPredicted RBP14.12□□□□□ -0.15
CHGA-202ENST00000334654 SLC5A7Q9GZV3 580 aa14.12□□□□□ -0.15
CHGA-202ENST00000334654 RBM7Q9Y580 266 aaKnown RBP14.12□□□□□ -0.15
CHGA-202ENST00000334654 HSD17B6O14756 317 aa14.11□□□□□ -0.15
CHGA-202ENST00000334654 SRD5A1P18405 259 aa14.11□□□□□ -0.15
CHGA-202ENST00000334654 CEACAM3P40198 252 aa14.11□□□□□ -0.15
CHGA-202ENST00000334654 GPR12P47775 334 aa14.11□□□□□ -0.15
CHGA-202ENST00000334654 REG1BP48304 166 aa14.11□□□□□ -0.15
CHGA-202ENST00000334654 UCP3P55916 312 aa14.11□□□□□ -0.15
CHGA-202ENST00000334654 LINC00205P59089 165 aa14.11□□□□□ -0.15
CHGA-202ENST00000334654 HERV-K104P61576 105 aa14.11□□□□□ -0.15
CHGA-202ENST00000334654 SCGB2B2Q4G0G5 96 aa14.11□□□□□ -0.15
CHGA-202ENST00000334654 TOMM40LQ969M1 308 aa14.11□□□□□ -0.15
CHGA-202ENST00000334654 RPEQ96AT9 228 aa14.11□□□□□ -0.15
CHGA-202ENST00000334654 MCUBQ9NWR8 336 aa14.11□□□□□ -0.15
CHGA-202ENST00000334654 ZNF221Q9UK13 617 aa14.11□□□□□ -0.15
CHGA-202ENST00000334654 CENPXA8MT69 81 aa14.1□□□□□ -0.15
CHGA-202ENST00000334654 OOSP1A8MZH6 123 aa14.1□□□□□ -0.15
CHGA-202ENST00000334654 GAPDHP04406 335 aaKnown RBP14.1□□□□□ -0.15
CHGA-202ENST00000334654 IL3RAP26951 378 aa14.1□□□□□ -0.15
CHGA-202ENST00000334654 FAUP35544 74 aaKnown RBP14.1□□□□□ -0.15
CHGA-202ENST00000334654 FAM71F2Q6NXP2 309 aa14.1□□□□□ -0.15
CHGA-202ENST00000334654 ZNF818PQ6ZRF7 136 aa14.1□□□□□ -0.15
CHGA-202ENST00000334654 CENPSQ8N2Z9 138 aa14.1□□□□□ -0.15
CHGA-202ENST00000334654 PIFOQ8TCI5 191 aa14.1□□□□□ -0.15
CHGA-202ENST00000334654 CFHR4Q92496 578 aa14.1□□□□□ -0.15
CHGA-202ENST00000334654 PRRT1Q99946 306 aa14.1□□□□□ -0.15
CHGA-202ENST00000334654 RSRP1Q9BUV0 290 aa14.1□□□□□ -0.15
CHGA-202ENST00000334654 IGHV1-3A0A0C4DH29 117 aa14.09□□□□□ -0.15
CHGA-202ENST00000334654 NAP1L6A6NFF2 107 aa14.09□□□□□ -0.15
CHGA-202ENST00000334654 LYRM1O43325 122 aa14.09□□□□□ -0.15
CHGA-202ENST00000334654 SLC22A5O76082 557 aa14.09□□□□□ -0.15
CHGA-202ENST00000334654 FBP1P09467 338 aa14.09□□□□□ -0.15
CHGA-202ENST00000334654 CT45A6P0DMU7 189 aa14.09□□□□□ -0.15
CHGA-202ENST00000334654 CT45A5P0DMU8 189 aa14.09□□□□□ -0.15
CHGA-202ENST00000334654 CT45A7P0DMV0 189 aa14.09□□□□□ -0.15
CHGA-202ENST00000334654 HABP2Q14520 560 aaPredicted RBP14.09□□□□□ -0.15
CHGA-202ENST00000334654 MSMO1Q15800 293 aa14.09□□□□□ -0.15
CHGA-202ENST00000334654 IDO2Q6ZQW0 420 aa14.09□□□□□ -0.15
CHGA-202ENST00000334654 MARCH1Q8TCQ1 289 aa14.09□□□□□ -0.15
CHGA-202ENST00000334654 RBMXL1Q96E39 390 aaKnown RBP14.09□□□□□ -0.15
CHGA-202ENST00000334654 S1PR3Q99500 378 aa14.09□□□□□ -0.15
CHGA-202ENST00000334654 NABP2Q9BQ15 211 aa14.09□□□□□ -0.15
CHGA-202ENST00000334654 MRPL20Q9BYC9 149 aaKnown RBP14.09□□□□□ -0.15
CHGA-202ENST00000334654 SCP2D1Q9UJQ7 156 aa14.09□□□□□ -0.15
CHGA-202ENST00000334654 FAM96BQ9Y3D0 163 aa14.09□□□□□ -0.15
CHGA-202ENST00000334654 CCR6P51684 374 aa14.08□□□□□ -0.16
CHGA-202ENST00000334654 BAMBIQ13145 260 aa14.08□□□□□ -0.16
CHGA-202ENST00000334654 FBLN7Q53RD9 439 aa14.08□□□□□ -0.16
CHGA-202ENST00000334654 Q6YL49 198 aa14.08□□□□□ -0.16
CHGA-202ENST00000334654 TGIF2LXQ8IUE1 241 aa14.08□□□□□ -0.16
CHGA-202ENST00000334654 OR8H3Q8N146 312 aa14.08□□□□□ -0.16
CHGA-202ENST00000334654 DRAXINQ8NBI3 349 aaPredicted RBP14.08□□□□□ -0.16
CHGA-202ENST00000334654 BVESQ8NE79 360 aa14.08□□□□□ -0.16
CHGA-202ENST00000334654 GPHA2Q96T91 129 aa14.08□□□□□ -0.16
CHGA-202ENST00000334654 GPR132Q9UNW8 380 aa14.08□□□□□ -0.16
CHGA-202ENST00000334654 CUBNO60494 3623 aa14.07□□□□□ -0.16
CHGA-202ENST00000334654 FAM90A9PA6NNJ1 464 aa14.07□□□□□ -0.16
CHGA-202ENST00000334654 LINC00473A8K010 186 aa14.07□□□□□ -0.16
CHGA-202ENST00000334654 M0R1X1 148 aa14.07□□□□□ -0.16
CHGA-202ENST00000334654 TIMM23O14925 209 aa14.07□□□□□ -0.16
CHGA-202ENST00000334654 FAM157CP0CG43 387 aa14.07□□□□□ -0.16
CHGA-202ENST00000334654 DUTP33316 252 aaKnown RBP14.07□□□□□ -0.16
CHGA-202ENST00000334654 RAB13P51153 203 aa14.07□□□□□ -0.16
CHGA-202ENST00000334654 RPL30P62888 115 aaKnown RBP14.07□□□□□ -0.16
CHGA-202ENST00000334654 PLA1AQ53H76 456 aa14.07□□□□□ -0.16
CHGA-202ENST00000334654 SIGLECL1Q8N7X8 197 aa14.07□□□□□ -0.16
CHGA-202ENST00000334654 ZNF383Q8NA42 475 aa14.07□□□□□ -0.16
CHGA-202ENST00000334654 DUSP18Q8NEJ0 188 aa14.07□□□□□ -0.16
CHGA-202ENST00000334654 AKR1E2Q96JD6 320 aa14.07□□□□□ -0.16
CHGA-202ENST00000334654 SETD2Q9BYW2 2564 aaPredicted RBP14.06□□□□□ -0.16
CHGA-202ENST00000334654 TXNL1O43396 289 aa14.06□□□□□ -0.16
CHGA-202ENST00000334654 DYNLT3P51808 116 aa14.06□□□□□ -0.16
CHGA-202ENST00000334654 SURF2Q15527 256 aaPredicted RBP14.06□□□□□ -0.16
CHGA-202ENST00000334654 CCDC144NLQ6NUI1 221 aa14.06□□□□□ -0.16
CHGA-202ENST00000334654 LPCAT3Q6P1A2 487 aa14.06□□□□□ -0.16
CHGA-202ENST00000334654 GLDNQ6ZMI3 551 aaPredicted RBP14.06□□□□□ -0.16
CHGA-202ENST00000334654 SLC38A6Q8IZM9 456 aa14.06□□□□□ -0.16
CHGA-202ENST00000334654 ZBTB34Q8NCN2 500 aa14.06□□□□□ -0.16
CHGA-202ENST00000334654 DDB2Q92466 427 aa14.06□□□□□ -0.16
CHGA-202ENST00000334654 RTBDNQ9BSG5 229 aaPredicted RBP14.06□□□□□ -0.16
CHGA-202ENST00000334654 COPZ2Q9P299 210 aa14.06□□□□□ -0.16
CHGA-202ENST00000334654 VSIG4Q9Y279 399 aa14.06□□□□□ -0.16
CHGA-202ENST00000334654 NF1P21359 2839 aa14.06□□□□□ -0.16
CHGA-202ENST00000334654 GPR31O00270 319 aa14.06□□□□□ -0.16
CHGA-202ENST00000334654 PI3P19957 117 aa14.06□□□□□ -0.16
CHGA-202ENST00000334654 SLC6A1P30531 599 aa14.06□□□□□ -0.16
CHGA-202ENST00000334654 IER3P46695 156 aa14.06□□□□□ -0.16
CHGA-202ENST00000334654 BRWD1-AS2P59051 145 aa14.06□□□□□ -0.16
CHGA-202ENST00000334654 AANATQ16613 207 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms