RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 HYPMO75409 117 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 ATOH7Q8N100 152 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 WNT5BQ9H1J7 359 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 Q9N2K0 584 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 DIRC3C9JPN6 131 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 EFNB2P52799 333 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 MFAP2P55001 183 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 NSUN5P1Q3KNT7 163 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 LAMTOR1Q6IAA8 161 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 VAX2Q9UIW0 290 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 XIRP1Q702N8 1843 aaKnown RBP9.16□□□□□ -0.94
CLN8-201ENST00000331222 KBTBD11O94819 623 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 SUMO2P61956 95 aaKnown RBP9.16□□□□□ -0.94
CLN8-201ENST00000331222 ANAPC16Q96DE5 110 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 PXMP4Q9Y6I8 212 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 PATJQ8NI35 1801 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 GREB1Q4ZG55 1949 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 COL18A1P39060 1754 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 WNT9BO14905 357 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 IL24Q13007 206 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 CALHM1Q8IU99 346 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 TMEM52Q8NDY8 209 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 ASB5Q8WWX0 329 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 LYRM2Q9NU23 88 aaPredicted RBP9.16□□□□□ -0.94
CLN8-201ENST00000331222 TOMM7Q9P0U1 55 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 B4E171 279 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 LTBRP36941 435 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 RUNX1Q01196 453 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 DCAF12L2Q5VW00 463 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 XAF1Q6GPH4 301 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 PRSS54Q6PEW0 395 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 INO80CQ6PI98 192 aaPredicted RBP9.16□□□□□ -0.94
CLN8-201ENST00000331222 SLC25A42Q86VD7 318 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 ZNF383Q8NA42 475 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 NUDT10Q8NFP7 164 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 ZPLD1Q8TCW7 415 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 NUDT11Q96G61 164 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 COX14Q96I36 57 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 WFIKKN1Q96NZ8 548 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 PEBP1P30086 187 aaKnown RBP9.15□□□□□ -0.94
CLN8-201ENST00000331222 ATG101Q9BSB4 218 aa9.15□□□□□ -0.94
CLN8-201ENST00000331222 SLC25A33Q9BSK2 321 aa9.15□□□□□ -0.94
CLN8-201ENST00000331222 RAB33BQ9H082 229 aa9.15□□□□□ -0.94
CLN8-201ENST00000331222 CENPVL1A0A0U1RR11 272 aa9.15□□□□□ -0.94
CLN8-201ENST00000331222 ANKRD20A5PA0PJZ0 165 aa9.15□□□□□ -0.94
CLN8-201ENST00000331222 ZNF815PA8K554 130 aa9.15□□□□□ -0.94
CLN8-201ENST00000331222 LMX1BO60663 402 aa9.15□□□□□ -0.94
CLN8-201ENST00000331222 ABLIM2Q6H8Q1 611 aa9.15□□□□□ -0.94
CLN8-201ENST00000331222 SGMS2Q8NHU3 365 aa9.15□□□□□ -0.94
CLN8-201ENST00000331222 DOCK11Q5JSL3 2073 aa9.15□□□□□ -0.94
CLN8-201ENST00000331222 PPIAL4CA0A0B4J2A2 164 aa9.15□□□□□ -0.94
CLN8-201ENST00000331222 NPIPB6E9PJ23 425 aa9.15□□□□□ -0.94
CLN8-201ENST00000331222 TCF21O43680 179 aa9.15□□□□□ -0.94
CLN8-201ENST00000331222 PPIAL4GP0DN37 164 aa9.15□□□□□ -0.94
CLN8-201ENST00000331222 SRD5A1P18405 259 aa9.15□□□□□ -0.94
CLN8-201ENST00000331222 SLC22A18ASQ8N1D0 253 aa9.15□□□□□ -0.94
CLN8-201ENST00000331222 RAX2Q96IS3 184 aa9.15□□□□□ -0.94
CLN8-201ENST00000331222 KMT2EQ8IZD2 1858 aa9.15□□□□□ -0.94
CLN8-201ENST00000331222 ISG15P05161 165 aa9.15□□□□□ -0.94
CLN8-201ENST00000331222 RPL27AP46776 148 aaKnown RBP9.15□□□□□ -0.94
CLN8-201ENST00000331222 MYO7BQ6PIF6 2116 aa9.15□□□□□ -0.94
CLN8-201ENST00000331222 GEMIN7Q9H840 131 aaKnown RBP9.15□□□□□ -0.94
CLN8-201ENST00000331222 YAE1D1Q9NRH1 226 aa9.15□□□□□ -0.94
CLN8-201ENST00000331222 HSPB7Q9UBY9 170 aa9.15□□□□□ -0.94
CLN8-201ENST00000331222 KLHDC2Q9Y2U9 406 aa9.15□□□□□ -0.94
CLN8-201ENST00000331222 GLI3P10071 1580 aa9.15□□□□□ -0.95
CLN8-201ENST00000331222 IGHV1-45A0A0A0MS14 117 aa9.15□□□□□ -0.95
CLN8-201ENST00000331222 PGPA6NDG6 321 aa9.15□□□□□ -0.95
CLN8-201ENST00000331222 PEX11BO96011 259 aa9.15□□□□□ -0.95
CLN8-201ENST00000331222 LGALS3P17931 250 aaKnown RBP9.15□□□□□ -0.95
CLN8-201ENST00000331222 ACSF3Q4G176 576 aaPredicted RBP9.15□□□□□ -0.95
CLN8-201ENST00000331222 UNQ9370/PRO34162Q6UXP9 181 aa9.15□□□□□ -0.95
CLN8-201ENST00000331222 ATG4DQ86TL0 474 aaPredicted RBP9.15□□□□□ -0.95
CLN8-201ENST00000331222 CA10Q9NS85 328 aa9.15□□□□□ -0.95
CLN8-201ENST00000331222 PHF3Q92576 2039 aaKnown RBP9.15□□□□□ -0.95
CLN8-201ENST00000331222 B4DEV8 164 aa9.14□□□□□ -0.95
CLN8-201ENST00000331222 C1QCP02747 245 aa9.14□□□□□ -0.95
CLN8-201ENST00000331222 LINC00869P0C866 280 aa9.14□□□□□ -0.95
CLN8-201ENST00000331222 PSG4Q00888 419 aa9.14□□□□□ -0.95
CLN8-201ENST00000331222 ISXQ2M1V0 245 aa9.14□□□□□ -0.95
CLN8-201ENST00000331222 DEFB104AQ8WTQ1 72 aa9.14□□□□□ -0.95
CLN8-201ENST00000331222 INTS1Q8N201 2190 aaKnown RBP9.14□□□□□ -0.95
CLN8-201ENST00000331222 GPR82Q96P67 336 aa9.14□□□□□ -0.95
CLN8-201ENST00000331222 DUSP15Q9H1R2 295 aaPredicted RBP9.14□□□□□ -0.95
CLN8-201ENST00000331222 CADP27708 2225 aa9.14□□□□□ -0.95
CLN8-201ENST00000331222 FOXI3A8MTJ6 420 aaPredicted RBP9.14□□□□□ -0.95
CLN8-201ENST00000331222 RPL36A-HNRNPH2H7BZ11 118 aa9.14□□□□□ -0.95
CLN8-201ENST00000331222 NDUFB4O95168 129 aa9.14□□□□□ -0.95
CLN8-201ENST00000331222 OR2H2O95918 312 aa9.14□□□□□ -0.95
CLN8-201ENST00000331222 ANOS1P23352 680 aa9.14□□□□□ -0.95
CLN8-201ENST00000331222 HIST1H1AQ02539 215 aaPredicted RBP9.14□□□□□ -0.95
CLN8-201ENST00000331222 PQLC2Q6ZP29 291 aa9.14□□□□□ -0.95
CLN8-201ENST00000331222 AQP10Q96PS8 301 aa9.14□□□□□ -0.95
CLN8-201ENST00000331222 NUDT16L1Q9BRJ7 211 aaKnown RBP9.14□□□□□ -0.95
CLN8-201ENST00000331222 PDE6DO43924 150 aa9.14□□□□□ -0.95
CLN8-201ENST00000331222 UQCC3Q6UW78 93 aa9.14□□□□□ -0.95
CLN8-201ENST00000331222 RBKSQ9H477 322 aa9.14□□□□□ -0.95
CLN8-201ENST00000331222 CALYQ9NYX4 217 aa9.14□□□□□ -0.95
CLN8-201ENST00000331222 SHANK3Q9BYB0 1731 aa9.14□□□□□ -0.95
CLN8-201ENST00000331222 P2RY1P47900 373 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms