RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 FAM90A26D6RGX4 464 aa12.62□□□□□ -0.39
CCDC116-201ENST00000292779 ATXN7O15265 892 aaPredicted RBP12.62□□□□□ -0.39
CCDC116-201ENST00000292779 TAGLN2P37802 199 aaKnown RBP12.62□□□□□ -0.39
CCDC116-201ENST00000292779 EIF2S3P41091 472 aaKnown RBP12.62□□□□□ -0.39
CCDC116-201ENST00000292779 TNFRSF9Q07011 255 aa12.62□□□□□ -0.39
CCDC116-201ENST00000292779 EIF4EBP1Q13541 118 aaPredicted RBP12.62□□□□□ -0.39
CCDC116-201ENST00000292779 SSX7Q7RTT5 188 aa12.62□□□□□ -0.39
CCDC116-201ENST00000292779 TPRX1Q8N7U7 411 aa12.62□□□□□ -0.39
CCDC116-201ENST00000292779 ZBTB34Q8NCN2 500 aa12.62□□□□□ -0.39
CCDC116-201ENST00000292779 OR4C12Q96R67 309 aa12.62□□□□□ -0.39
CCDC116-201ENST00000292779 ZNF891A8MT65 544 aaPredicted RBP12.62□□□□□ -0.39
CCDC116-201ENST00000292779 K7EM74 188 aa12.62□□□□□ -0.39
CCDC116-201ENST00000292779 PPIHO43447 177 aaKnown RBP12.62□□□□□ -0.39
CCDC116-201ENST00000292779 KITLGP21583 273 aa12.62□□□□□ -0.39
CCDC116-201ENST00000292779 MEOX2P50222 304 aa12.62□□□□□ -0.39
CCDC116-201ENST00000292779 OR2B8PP59922 312 aa12.62□□□□□ -0.39
CCDC116-201ENST00000292779 DLK1P80370 383 aa12.62□□□□□ -0.39
CCDC116-201ENST00000292779 ACSF3Q4G176 576 aaPredicted RBP12.62□□□□□ -0.39
CCDC116-201ENST00000292779 LCN15Q6UWW0 184 aa12.62□□□□□ -0.39
CCDC116-201ENST00000292779 BTNL3Q6UXE8 466 aa12.62□□□□□ -0.39
CCDC116-201ENST00000292779 PRR7Q8TB68 274 aa12.62□□□□□ -0.39
CCDC116-201ENST00000292779 NINJ1Q92982 152 aa12.62□□□□□ -0.39
CCDC116-201ENST00000292779 MUCL1Q96DR8 90 aa12.62□□□□□ -0.39
CCDC116-201ENST00000292779 MALSU1Q96EH3 234 aa12.62□□□□□ -0.39
CCDC116-201ENST00000292779 TAAR6Q96RI8 345 aa12.62□□□□□ -0.39
CCDC116-201ENST00000292779 WDR61Q9GZS3 305 aaKnown RBP12.62□□□□□ -0.39
CCDC116-201ENST00000292779 CLDN1O95832 211 aa12.61□□□□□ -0.39
CCDC116-201ENST00000292779 OR8U8P0C7N1 319 aa12.61□□□□□ -0.39
CCDC116-201ENST00000292779 MAS1LP35410 378 aa12.61□□□□□ -0.39
CCDC116-201ENST00000292779 GLIPR1P48060 266 aa12.61□□□□□ -0.39
CCDC116-201ENST00000292779 FGF8P55075 233 aaPredicted RBP12.61□□□□□ -0.39
CCDC116-201ENST00000292779 BRWD1-AS2P59051 145 aa12.61□□□□□ -0.39
CCDC116-201ENST00000292779 COL10A1Q03692 680 aa12.61□□□□□ -0.39
CCDC116-201ENST00000292779 ZNF787Q6DD87 383 aa12.61□□□□□ -0.39
CCDC116-201ENST00000292779 OR8G2PQ6IF36 304 aa12.61□□□□□ -0.39
CCDC116-201ENST00000292779 ZNF665Q9H7R5 613 aa12.61□□□□□ -0.39
CCDC116-201ENST00000292779 PLSCR4Q9NRQ2 329 aa12.61□□□□□ -0.39
CCDC116-201ENST00000292779 DKK4Q9UBT3 224 aa12.61□□□□□ -0.39
CCDC116-201ENST00000292779 HSPB7Q9UBY9 170 aa12.61□□□□□ -0.39
CCDC116-201ENST00000292779 UBE2L5PA0A1B0GUS4 154 aa12.6□□□□□ -0.39
CCDC116-201ENST00000292779 ZFP92A6NM28 416 aa12.6□□□□□ -0.39
CCDC116-201ENST00000292779 C17orf98A8MV24 154 aa12.6□□□□□ -0.39
CCDC116-201ENST00000292779 UBE2CO00762 179 aa12.6□□□□□ -0.39
CCDC116-201ENST00000292779 S1PR2O95136 353 aa12.6□□□□□ -0.39
CCDC116-201ENST00000292779 P0C879 139 aa12.6□□□□□ -0.39
CCDC116-201ENST00000292779 SSTR5P35346 364 aa12.6□□□□□ -0.39
CCDC116-201ENST00000292779 SLC38A11Q08AI6 406 aa12.6□□□□□ -0.39
CCDC116-201ENST00000292779 ZNF718Q3SXZ3 478 aa12.6□□□□□ -0.39
CCDC116-201ENST00000292779 TMEM14EPQ6UXP3 125 aa12.6□□□□□ -0.39
CCDC116-201ENST00000292779 ZNF610Q8N9Z0 462 aa12.6□□□□□ -0.39
CCDC116-201ENST00000292779 TCTEX1D2Q8WW35 142 aa12.6□□□□□ -0.39
CCDC116-201ENST00000292779 MBD3L1Q8WWY6 194 aa12.6□□□□□ -0.39
CCDC116-201ENST00000292779 TVP23CQ96ET8 276 aa12.6□□□□□ -0.39
CCDC116-201ENST00000292779 RCC1LQ96I51 464 aaKnown RBP12.6□□□□□ -0.39
CCDC116-201ENST00000292779 NIPSNAP3BQ9BS92 247 aa12.6□□□□□ -0.39
CCDC116-201ENST00000292779 TOLLIPQ9H0E2 274 aa12.6□□□□□ -0.39
CCDC116-201ENST00000292779 OPN3Q9H1Y3 402 aaPredicted RBP12.6□□□□□ -0.39
CCDC116-201ENST00000292779 IGHV3-43A0A0B4J1X8 118 aa12.6□□□□□ -0.39
CCDC116-201ENST00000292779 TNFSF13O75888 250 aa12.6□□□□□ -0.39
CCDC116-201ENST00000292779 IGLV1-44P01699 117 aa12.6□□□□□ -0.39
CCDC116-201ENST00000292779 IGHV3-43DP0DP04 118 aa12.6□□□□□ -0.39
CCDC116-201ENST00000292779 GCH1P30793 250 aa12.6□□□□□ -0.39
CCDC116-201ENST00000292779 SERF2P84101 59 aa12.6□□□□□ -0.39
CCDC116-201ENST00000292779 CATR1Q13166 79 aa12.6□□□□□ -0.39
CCDC116-201ENST00000292779 HEPN1Q6WQI6 88 aa12.6□□□□□ -0.39
CCDC116-201ENST00000292779 OR13A1Q8NGR1 328 aa12.6□□□□□ -0.39
CCDC116-201ENST00000292779 ITPR1Q14643 2758 aa12.6□□□□□ -0.39
CCDC116-201ENST00000292779 IGHV2OR16-5A0A0B4J2B6 119 aa12.59□□□□□ -0.39
CCDC116-201ENST00000292779 IGHV1-18A0A0C4DH31 117 aa12.59□□□□□ -0.39
CCDC116-201ENST00000292779 ODAMA1E959 279 aa12.59□□□□□ -0.39
CCDC116-201ENST00000292779 OR5H1A6NKK0 313 aa12.59□□□□□ -0.39
CCDC116-201ENST00000292779 ELLP55199 621 aaPredicted RBP12.59□□□□□ -0.39
CCDC116-201ENST00000292779 MSMO1Q15800 293 aa12.59□□□□□ -0.39
CCDC116-201ENST00000292779 SMIM21Q3B7S5 101 aa12.59□□□□□ -0.39
CCDC116-201ENST00000292779 FAM180AQ6UWF9 173 aa12.59□□□□□ -0.39
CCDC116-201ENST00000292779 RFESDQ8TAC1 157 aa12.59□□□□□ -0.39
CCDC116-201ENST00000292779 TAF15Q92804 592 aaKnown RBP eCLIP12.59□□□□□ -0.39
CCDC116-201ENST00000292779 PARD6GQ9BYG4 376 aaPredicted RBP12.59□□□□□ -0.39
CCDC116-201ENST00000292779 CLN8Q9UBY8 286 aa12.59□□□□□ -0.39
CCDC116-201ENST00000292779 MSRB2Q9Y3D2 182 aa12.59□□□□□ -0.39
CCDC116-201ENST00000292779 A0A087WWC5 75 aa12.59□□□□□ -0.39
CCDC116-201ENST00000292779 LRRC30A6NM36 301 aa12.59□□□□□ -0.39
CCDC116-201ENST00000292779 BCL2P10415 239 aa12.59□□□□□ -0.39
CCDC116-201ENST00000292779 LINC00205P59089 165 aa12.59□□□□□ -0.39
CCDC116-201ENST00000292779 RAB11AP62491 216 aa12.59□□□□□ -0.39
CCDC116-201ENST00000292779 FABP9Q0Z7S8 132 aa12.59□□□□□ -0.39
CCDC116-201ENST00000292779 TMEM41BQ5BJD5 291 aa12.59□□□□□ -0.39
CCDC116-201ENST00000292779 OR10G4Q8NGN3 311 aa12.59□□□□□ -0.39
CCDC116-201ENST00000292779 STARD4Q96DR4 205 aa12.59□□□□□ -0.39
CCDC116-201ENST00000292779 ZNF71Q9NQZ8 489 aaPredicted RBP12.59□□□□□ -0.39
CCDC116-201ENST00000292779 CISD1Q9NZ45 108 aaKnown RBP12.59□□□□□ -0.39
CCDC116-201ENST00000292779 DEFB108AA8MXU0 73 aa12.58□□□□□ -0.4
CCDC116-201ENST00000292779 AHRRA9YTQ3 701 aa12.58□□□□□ -0.4
CCDC116-201ENST00000292779 IFNL4K9M1U5 179 aa12.58□□□□□ -0.4
CCDC116-201ENST00000292779 CD55P08174 381 aa12.58□□□□□ -0.4
CCDC116-201ENST00000292779 TUBG1P23258 451 aa12.58□□□□□ -0.4
CCDC116-201ENST00000292779 HNF4GQ14541 408 aa12.58□□□□□ -0.4
CCDC116-201ENST00000292779 MBNL2Q5VZF2 373 aaKnown RBP12.58□□□□□ -0.4
CCDC116-201ENST00000292779 RBMS3Q6XE24 437 aaKnown RBP12.58□□□□□ -0.4
CCDC116-201ENST00000292779 SLC35E3Q7Z769 313 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms