RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 ZNF645Q8N7E2 425 aa15.89■□□□□ 0.13
PCDH1-201ENST00000287008 G6PC2Q9NQR9 355 aa15.89■□□□□ 0.13
PCDH1-201ENST00000287008 DOCK6Q96HP0 2047 aa15.89■□□□□ 0.13
PCDH1-201ENST00000287008 CTXND1A0A1B0GTU2 59 aa15.88■□□□□ 0.13
PCDH1-201ENST00000287008 A0A1W2PS18 150 aa15.88■□□□□ 0.13
PCDH1-201ENST00000287008 P01737 135 aa15.88■□□□□ 0.13
PCDH1-201ENST00000287008 SPACA3Q8IXA5 215 aa15.88■□□□□ 0.13
PCDH1-201ENST00000287008 GLIPR1P48060 266 aa15.88■□□□□ 0.13
PCDH1-201ENST00000287008 FDX2Q6P4F2 183 aa15.88■□□□□ 0.13
PCDH1-201ENST00000287008 C16orf82Q7Z2V1 217 aa15.88■□□□□ 0.13
PCDH1-201ENST00000287008 OR10G8Q8NGN5 311 aa15.88■□□□□ 0.13
PCDH1-201ENST00000287008 A0A0G2JMM0 328 aa15.88■□□□□ 0.13
PCDH1-201ENST00000287008 A0A1W2PPB8 328 aa15.88■□□□□ 0.13
PCDH1-201ENST00000287008 A0A1W2PRS3 328 aa15.88■□□□□ 0.13
PCDH1-201ENST00000287008 KIR3DP1A8MWS1 328 aa15.88■□□□□ 0.13
PCDH1-201ENST00000287008 KIAA1324LA8MWY0 1029 aaPredicted RBP15.88■□□□□ 0.13
PCDH1-201ENST00000287008 LRRC75BQ2VPJ9 315 aa15.88■□□□□ 0.13
PCDH1-201ENST00000287008 MOGAT2Q3SYC2 334 aa15.88■□□□□ 0.13
PCDH1-201ENST00000287008 RBBP6Q7Z6E9 1792 aaKnown RBP15.88■□□□□ 0.13
PCDH1-201ENST00000287008 PCNX1Q96RV3 2341 aa15.88■□□□□ 0.13
PCDH1-201ENST00000287008 HAX1O00165 279 aa15.88■□□□□ 0.13
PCDH1-201ENST00000287008 KLF4O43474 513 aa15.88■□□□□ 0.13
PCDH1-201ENST00000287008 COMPP49747 757 aaPredicted RBP15.88■□□□□ 0.13
PCDH1-201ENST00000287008 LY6EQ16553 131 aa15.88■□□□□ 0.13
PCDH1-201ENST00000287008 TMEM186Q96B77 213 aa15.88■□□□□ 0.13
PCDH1-201ENST00000287008 MEGF10Q96KG7 1140 aa15.88■□□□□ 0.13
PCDH1-201ENST00000287008 VAX2Q9UIW0 290 aa15.88■□□□□ 0.13
PCDH1-201ENST00000287008 RPEL1Q2QD12 228 aa15.87■□□□□ 0.13
PCDH1-201ENST00000287008 RNASEKQ6P5S7 137 aaKnown RBP15.87■□□□□ 0.13
PCDH1-201ENST00000287008 NEU4Q8WWR8 484 aaPredicted RBP15.87■□□□□ 0.13
PCDH1-201ENST00000287008 TMEM106BQ9NUM4 274 aa15.87■□□□□ 0.13
PCDH1-201ENST00000287008 NTN3O00634 580 aaPredicted RBP15.87■□□□□ 0.13
PCDH1-201ENST00000287008 TMEM222Q9H0R3 208 aa15.87■□□□□ 0.13
PCDH1-201ENST00000287008 OR10J1P30954 320 aa15.87■□□□□ 0.13
PCDH1-201ENST00000287008 HIST1H3AP68431 136 aa15.87■□□□□ 0.13
PCDH1-201ENST00000287008 PNKDQ8N490 385 aa15.87■□□□□ 0.13
PCDH1-201ENST00000287008 NAT8Q9UHE5 227 aa15.87■□□□□ 0.13
PCDH1-201ENST00000287008 CXorf1O96002 111 aa15.87■□□□□ 0.13
PCDH1-201ENST00000287008 WNT5AP41221 380 aa15.87■□□□□ 0.13
PCDH1-201ENST00000287008 KHDC3LQ587J8 217 aa15.87■□□□□ 0.13
PCDH1-201ENST00000287008 WDR73Q6P4I2 378 aa15.87■□□□□ 0.13
PCDH1-201ENST00000287008 KLHDC1Q8N7A1 406 aa15.87■□□□□ 0.13
PCDH1-201ENST00000287008 SCMH1Q96GD3 660 aa15.87■□□□□ 0.13
PCDH1-201ENST00000287008 Q96M66 194 aa15.87■□□□□ 0.13
PCDH1-201ENST00000287008 SRD5A3Q9H8P0 318 aa15.87■□□□□ 0.13
PCDH1-201ENST00000287008 SLC2A8Q9NY64 477 aa15.87■□□□□ 0.13
PCDH1-201ENST00000287008 MRPS18CQ9Y3D5 142 aaKnown RBP15.87■□□□□ 0.13
PCDH1-201ENST00000287008 NOTCH2Q04721 2471 aa15.87■□□□□ 0.13
PCDH1-201ENST00000287008 RGS13O14921 159 aa15.86■□□□□ 0.13
PCDH1-201ENST00000287008 EFEMP2O95967 443 aa15.86■□□□□ 0.13
PCDH1-201ENST00000287008 TFPI2P48307 235 aa15.86■□□□□ 0.13
PCDH1-201ENST00000287008 SUMO1P63165 101 aaKnown RBP15.86■□□□□ 0.13
PCDH1-201ENST00000287008 STPG3Q8N7X2 389 aa15.86■□□□□ 0.13
PCDH1-201ENST00000287008 PAGE4O60829 102 aa15.86■□□□□ 0.13
PCDH1-201ENST00000287008 USF1P22415 310 aaPredicted RBP15.86■□□□□ 0.13
PCDH1-201ENST00000287008 NPBWR2P48146 333 aa15.86■□□□□ 0.13
PCDH1-201ENST00000287008 NRN1LQ496H8 165 aa15.86■□□□□ 0.13
PCDH1-201ENST00000287008 FADS6Q8N9I5 356 aa15.86■□□□□ 0.13
PCDH1-201ENST00000287008 SNRNP40Q96DI7 357 aaKnown RBP15.86■□□□□ 0.13
PCDH1-201ENST00000287008 PIN1P1O15428 100 aa15.86■□□□□ 0.13
PCDH1-201ENST00000287008 EBLN2Q6P2I7 272 aa15.86■□□□□ 0.13
PCDH1-201ENST00000287008 OR4C13Q8NGP0 309 aa15.86■□□□□ 0.13
PCDH1-201ENST00000287008 AICDAQ9GZX7 198 aa15.86■□□□□ 0.13
PCDH1-201ENST00000287008 GPR132Q9UNW8 380 aa15.86■□□□□ 0.13
PCDH1-201ENST00000287008 HELTA6NFD8 242 aa15.86■□□□□ 0.13
PCDH1-201ENST00000287008 PTTG1IPP53801 180 aa15.86■□□□□ 0.13
PCDH1-201ENST00000287008 CD200R1LQ6Q8B3 271 aa15.86■□□□□ 0.13
PCDH1-201ENST00000287008 TOLLIPQ9H0E2 274 aa15.86■□□□□ 0.13
PCDH1-201ENST00000287008 RANP62826 216 aaKnown RBP15.85■□□□□ 0.13
PCDH1-201ENST00000287008 BSPH1Q075Z2 132 aa15.85■□□□□ 0.13
PCDH1-201ENST00000287008 FGFRL1Q8N441 504 aa15.85■□□□□ 0.13
PCDH1-201ENST00000287008 RNASE6Q93091 150 aaKnown RBP15.85■□□□□ 0.13
PCDH1-201ENST00000287008 DOCK8Q8NF50 2099 aa15.85■□□□□ 0.13
PCDH1-201ENST00000287008 ATP6V0CP27449 155 aa15.85■□□□□ 0.13
PCDH1-201ENST00000287008 CRYBA2P53672 197 aa15.85■□□□□ 0.13
PCDH1-201ENST00000287008 UNC119Q13432 240 aa15.85■□□□□ 0.13
PCDH1-201ENST00000287008 ZNRF1Q8ND25 227 aa15.85■□□□□ 0.13
PCDH1-201ENST00000287008 METTL26Q96S19 204 aa15.85■□□□□ 0.13
PCDH1-201ENST00000287008 TLNRD1Q9H1K6 362 aa15.85■□□□□ 0.13
PCDH1-201ENST00000287008 SIPA1L1O43166 1804 aa15.85■□□□□ 0.13
PCDH1-201ENST00000287008 SMAD7O15105 426 aaKnown RBP15.85■□□□□ 0.13
PCDH1-201ENST00000287008 SEC11BP0C7V7 166 aa15.85■□□□□ 0.13
PCDH1-201ENST00000287008 C9orf106Q8NAJ2 232 aa15.85■□□□□ 0.13
PCDH1-201ENST00000287008 OR5P3Q8WZ94 311 aa15.85■□□□□ 0.13
PCDH1-201ENST00000287008 ST6GAL2Q96JF0 529 aa15.85■□□□□ 0.13
PCDH1-201ENST00000287008 NRIP2Q9BQI9 281 aa15.85■□□□□ 0.13
PCDH1-201ENST00000287008 PAXXQ9BUH6 204 aa15.85■□□□□ 0.13
PCDH1-201ENST00000287008 SEC11CQ9BY50 192 aa15.85■□□□□ 0.13
PCDH1-201ENST00000287008 hCG_38984A0A1B0GV85 526 aa15.84■□□□□ 0.13
PCDH1-201ENST00000287008 MPDU1O75352 247 aa15.84■□□□□ 0.13
PCDH1-201ENST00000287008 TCL1AP56279 114 aa15.84■□□□□ 0.13
PCDH1-201ENST00000287008 HSPE1P61604 102 aaKnown RBP15.84■□□□□ 0.13
PCDH1-201ENST00000287008 FAM106AQ4KMX7 169 aa15.84■□□□□ 0.13
PCDH1-201ENST00000287008 POM121Q96HA1 1249 aa15.84■□□□□ 0.13
PCDH1-201ENST00000287008 WDYHV1Q96HA8 205 aa15.84■□□□□ 0.13
PCDH1-201ENST00000287008 LOC285556D6RIA3 1793 aa15.84■□□□□ 0.13
PCDH1-201ENST00000287008 COX19Q49B96 90 aa15.84■□□□□ 0.13
PCDH1-201ENST00000287008 TMEM252Q8N6L7 170 aa15.84■□□□□ 0.13
PCDH1-201ENST00000287008 FAM210BQ96KR6 192 aa15.84■□□□□ 0.13
PCDH1-201ENST00000287008 OR4C12Q96R67 309 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms