RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 NUFIP2Q7Z417 695 aaKnown RBP23.16■■□□□ 1.3
CBX4-201ENST00000269397 MPC1Q9Y5U8 109 aa23.16■■□□□ 1.3
CBX4-201ENST00000269397 PCSK5Q92824 1860 aa23.15■■□□□ 1.3
CBX4-201ENST00000269397 NPIPB11E5RHQ5 1161 aa23.15■■□□□ 1.3
CBX4-201ENST00000269397 MT-CO3P00414 261 aa23.15■■□□□ 1.3
CBX4-201ENST00000269397 COX5BP10606 129 aa23.15■■□□□ 1.3
CBX4-201ENST00000269397 RAB24Q969Q5 203 aa23.15■■□□□ 1.3
CBX4-201ENST00000269397 CTXND1A0A1B0GTU2 59 aa23.15■■□□□ 1.3
CBX4-201ENST00000269397 RPL30P62888 115 aaKnown RBP23.15■■□□□ 1.3
CBX4-201ENST00000269397 ACTR3CQ9C0K3 210 aaPredicted RBP23.15■■□□□ 1.3
CBX4-201ENST00000269397 STRADBQ9C0K7 418 aa23.15■■□□□ 1.3
CBX4-201ENST00000269397 TMEM250H0YL14 139 aa23.14■■□□□ 1.29
CBX4-201ENST00000269397 ZG16O60844 167 aa23.14■■□□□ 1.29
CBX4-201ENST00000269397 MAGEA5P43359 124 aa23.14■■□□□ 1.29
CBX4-201ENST00000269397 BOKQ9UMX3 212 aaPredicted RBP23.14■■□□□ 1.29
CBX4-201ENST00000269397 SYNGR4O95473 234 aa23.14■■□□□ 1.29
CBX4-201ENST00000269397 WNT2P09544 360 aa23.14■■□□□ 1.29
CBX4-201ENST00000269397 ARR3P36575 388 aa23.14■■□□□ 1.29
CBX4-201ENST00000269397 LINC00205P59089 165 aa23.14■■□□□ 1.29
CBX4-201ENST00000269397 ZXDAP98168 799 aa23.14■■□□□ 1.29
CBX4-201ENST00000269397 TGIF2LYQ8IUE0 185 aa23.14■■□□□ 1.29
CBX4-201ENST00000269397 OR2T10Q8NGZ9 312 aa23.14■■□□□ 1.29
CBX4-201ENST00000269397 THOC3Q96J01 351 aaKnown RBP23.14■■□□□ 1.29
CBX4-201ENST00000269397 J3QT63 122 aa23.13■■□□□ 1.29
CBX4-201ENST00000269397 CRYAAP02489 173 aa23.13■■□□□ 1.29
CBX4-201ENST00000269397 SSX2Q16385 188 aa23.13■■□□□ 1.29
CBX4-201ENST00000269397 TMEM170AQ8WVE7 144 aa23.13■■□□□ 1.29
CBX4-201ENST00000269397 PARD6GQ9BYG4 376 aaPredicted RBP23.13■■□□□ 1.29
CBX4-201ENST00000269397 OR2D2Q9H210 308 aa23.13■■□□□ 1.29
CBX4-201ENST00000269397 SIT1Q9Y3P8 196 aa23.13■■□□□ 1.29
CBX4-201ENST00000269397 CDIPTO14735 213 aa23.13■■□□□ 1.29
CBX4-201ENST00000269397 Q3ZCU0 254 aa23.13■■□□□ 1.29
CBX4-201ENST00000269397 BTNL3Q6UXE8 466 aa23.13■■□□□ 1.29
CBX4-201ENST00000269397 SCCPDHQ8NBX0 429 aa23.13■■□□□ 1.29
CBX4-201ENST00000269397 OR1L1Q8NH94 360 aa23.13■■□□□ 1.29
CBX4-201ENST00000269397 OR4A8P0C604 315 aa23.12■■□□□ 1.29
CBX4-201ENST00000269397 NPPCP23582 126 aa23.12■■□□□ 1.29
CBX4-201ENST00000269397 CENPVQ7Z7K6 275 aaPredicted RBP23.12■■□□□ 1.29
CBX4-201ENST00000269397 TGIF2LXQ8IUE1 241 aa23.12■■□□□ 1.29
CBX4-201ENST00000269397 C5orf30Q96GV9 206 aa23.12■■□□□ 1.29
CBX4-201ENST00000269397 ZNF703Q9H7S9 590 aaPredicted RBP23.12■■□□□ 1.29
CBX4-201ENST00000269397 ODAMA1E959 279 aa23.12■■□□□ 1.29
CBX4-201ENST00000269397 ST8SIA5O15466 376 aa23.12■■□□□ 1.29
CBX4-201ENST00000269397 S1PR2O95136 353 aa23.12■■□□□ 1.29
CBX4-201ENST00000269397 COA6Q5JTJ3 125 aaKnown RBP23.12■■□□□ 1.29
CBX4-201ENST00000269397 TIPARPQ7Z3E1 657 aaKnown RBP23.12■■□□□ 1.29
CBX4-201ENST00000269397 OR2M7Q8NG81 312 aa23.12■■□□□ 1.29
CBX4-201ENST00000269397 HSPB7Q9UBY9 170 aa23.12■■□□□ 1.29
CBX4-201ENST00000269397 WASF3Q9UPY6 502 aa23.12■■□□□ 1.29
CBX4-201ENST00000269397 MRPS18CQ9Y3D5 142 aaKnown RBP23.12■■□□□ 1.29
CBX4-201ENST00000269397 TIMM9Q9Y5J7 89 aa23.12■■□□□ 1.29
CBX4-201ENST00000269397 A0A1B0GUS0 222 aa23.11■■□□□ 1.29
CBX4-201ENST00000269397 RBMXL2O75526 392 aaKnown RBP23.11■■□□□ 1.29
CBX4-201ENST00000269397 PMS2CLQ68D20 193 aa23.11■■□□□ 1.29
CBX4-201ENST00000269397 MRPL41Q8IXM3 137 aaKnown RBP23.11■■□□□ 1.29
CBX4-201ENST00000269397 TMEM147Q9BVK8 224 aa23.11■■□□□ 1.29
CBX4-201ENST00000269397 PKIBQ9C010 78 aa23.11■■□□□ 1.29
CBX4-201ENST00000269397 HOXA6P31267 233 aa23.11■■□□□ 1.29
CBX4-201ENST00000269397 UBE2G2P60604 165 aa23.11■■□□□ 1.29
CBX4-201ENST00000269397 ACTL10Q5JWF8 245 aa23.11■■□□□ 1.29
CBX4-201ENST00000269397 TDHQ8IZJ6 230 aa23.11■■□□□ 1.29
CBX4-201ENST00000269397 MAFAQ8NHW3 353 aaPredicted RBP23.11■■□□□ 1.29
CBX4-201ENST00000269397 CT55Q8WUE5 264 aa23.11■■□□□ 1.29
CBX4-201ENST00000269397 NXPH2O95156 264 aa23.1■■□□□ 1.29
CBX4-201ENST00000269397 C2orf88Q9BSF0 95 aa23.1■■□□□ 1.29
CBX4-201ENST00000269397 NEURL1O76050 574 aa23.1■■□□□ 1.29
CBX4-201ENST00000269397 TFF1P04155 84 aa23.1■■□□□ 1.29
CBX4-201ENST00000269397 GCSAMLQ5JQS6 135 aa23.1■■□□□ 1.29
CBX4-201ENST00000269397 MOB1BQ7L9L4 216 aa23.1■■□□□ 1.29
CBX4-201ENST00000269397 OR10P1Q8NGE3 313 aa23.1■■□□□ 1.29
CBX4-201ENST00000269397 OR52L2PQ8NGH6 319 aa23.1■■□□□ 1.29
CBX4-201ENST00000269397 NDUFAF3Q9BU61 184 aa23.1■■□□□ 1.29
CBX4-201ENST00000269397 DDA1Q9BW61 102 aa23.1■■□□□ 1.29
CBX4-201ENST00000269397 NPCDR1Q9BY65 106 aa23.1■■□□□ 1.29
CBX4-201ENST00000269397 LRRC30A6NM36 301 aa23.09■■□□□ 1.29
CBX4-201ENST00000269397 SERPINA7P05543 415 aa23.09■■□□□ 1.29
CBX4-201ENST00000269397 OR3A1P47881 315 aa23.09■■□□□ 1.29
CBX4-201ENST00000269397 ALKBH6Q3KRA9 238 aa23.09■■□□□ 1.29
CBX4-201ENST00000269397 FAM78BQ5VT40 261 aa23.09■■□□□ 1.29
CBX4-201ENST00000269397 WDYHV1Q96HA8 205 aa23.09■■□□□ 1.29
CBX4-201ENST00000269397 PGPEP1LA6NFU8 196 aa23.09■■□□□ 1.29
CBX4-201ENST00000269397 C17orf98A8MV24 154 aa23.09■■□□□ 1.29
CBX4-201ENST00000269397 C11orf94C9JXX5 98 aa23.09■■□□□ 1.29
CBX4-201ENST00000269397 FAM90A26D6RGX4 464 aa23.09■■□□□ 1.29
CBX4-201ENST00000269397 NEIL1Q96FI4 390 aaPredicted RBP23.09■■□□□ 1.29
CBX4-201ENST00000269397 ACY3Q96HD9 319 aa23.09■■□□□ 1.29
CBX4-201ENST00000269397 DERL1Q9BUN8 251 aa23.09■■□□□ 1.29
CBX4-201ENST00000269397 OR6C3Q9NZP0 311 aa23.09■■□□□ 1.29
CBX4-201ENST00000269397 PMS2P5A8MQ11 134 aa23.08■■□□□ 1.29
CBX4-201ENST00000269397 B4E171 279 aa23.08■■□□□ 1.29
CBX4-201ENST00000269397 EREGO14944 169 aa23.08■■□□□ 1.29
CBX4-201ENST00000269397 GRPP07492 148 aa23.08■■□□□ 1.29
CBX4-201ENST00000269397 COX5AP20674 150 aa23.08■■□□□ 1.29
CBX4-201ENST00000269397 MPLP40238 635 aa23.08■■□□□ 1.29
CBX4-201ENST00000269397 TSPAN7P41732 249 aa23.08■■□□□ 1.29
CBX4-201ENST00000269397 TRA2AQ13595 282 aaKnown RBP eCLIP23.08■■□□□ 1.293e-8■■■□□ 14.7
CBX4-201ENST00000269397 DTD1Q8TEA8 209 aa23.08■■□□□ 1.29
CBX4-201ENST00000269397 MDP1Q86V88 176 aa23.08■■□□□ 1.29
CBX4-201ENST00000269397 LURAP1Q96LR2 239 aa23.08■■□□□ 1.29
CBX4-201ENST00000269397 NOL4LQ96MY1 436 aaPredicted RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms