RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 ZNF658BQ4V348 819 aaPredicted RBP10.42□□□□□ -0.74
COL8A1-201ENST00000261037 PIMREGQ9BSJ6 248 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 IL19Q9UHD0 177 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 DSPPQ9NZW4 1301 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 PGLYRP1O75594 196 aaPredicted RBP10.42□□□□□ -0.74
COL8A1-201ENST00000261037 C1QL1O75973 258 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 MUC1P15941 1255 aaPredicted RBP10.42□□□□□ -0.74
COL8A1-201ENST00000261037 CXorf66Q5JRM2 361 aaPredicted RBP10.42□□□□□ -0.74
COL8A1-201ENST00000261037 OR52M1Q8NGK5 317 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 DDA1Q9BW61 102 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 FOXJ2Q9P0K8 574 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 PILRBQ9UKJ0 227 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 TMEM229AB2RXF0 380 aa10.41□□□□□ -0.74
COL8A1-201ENST00000261037 DIRC3C9JPN6 131 aa10.41□□□□□ -0.74
COL8A1-201ENST00000261037 SLC25A17O43808 307 aa10.41□□□□□ -0.74
COL8A1-201ENST00000261037 SEC11BP0C7V7 166 aa10.41□□□□□ -0.74
COL8A1-201ENST00000261037 SP9P0CG40 484 aa10.41□□□□□ -0.74
COL8A1-201ENST00000261037 BCL2P10415 239 aa10.41□□□□□ -0.74
COL8A1-201ENST00000261037 MAS1LP35410 378 aa10.41□□□□□ -0.74
COL8A1-201ENST00000261037 MFAP2P55001 183 aa10.41□□□□□ -0.74
COL8A1-201ENST00000261037 PLAURQ03405 335 aa10.41□□□□□ -0.74
COL8A1-201ENST00000261037 FXYD3Q14802 87 aa10.41□□□□□ -0.74
COL8A1-201ENST00000261037 MRPS18AQ9NVS2 196 aaKnown RBP10.41□□□□□ -0.74
COL8A1-201ENST00000261037 NPIPB8E9PQR5 432 aa10.41□□□□□ -0.74
COL8A1-201ENST00000261037 UCNP55089 124 aa10.41□□□□□ -0.74
COL8A1-201ENST00000261037 FAM3BP58499 235 aaPredicted RBP10.41□□□□□ -0.74
COL8A1-201ENST00000261037 LHFPL6Q9Y693 200 aa10.41□□□□□ -0.74
COL8A1-201ENST00000261037 LOC101059948A0A1B0GTJ6 334 aa10.41□□□□□ -0.74
COL8A1-201ENST00000261037 RNASE1P07998 156 aaKnown RBP10.41□□□□□ -0.74
COL8A1-201ENST00000261037 SELENOHQ8IZQ5 122 aaKnown RBP10.41□□□□□ -0.74
COL8A1-201ENST00000261037 OR4B1Q8NGF8 309 aa10.41□□□□□ -0.74
COL8A1-201ENST00000261037 SAP25Q8TEE9 199 aa10.41□□□□□ -0.74
COL8A1-201ENST00000261037 SGK494Q96LW2 274 aa10.41□□□□□ -0.74
COL8A1-201ENST00000261037 IGHV3-23P01764 117 aa10.41□□□□□ -0.74
COL8A1-201ENST00000261037 ARF6P62330 175 aa10.41□□□□□ -0.74
COL8A1-201ENST00000261037 RELBQ01201 579 aa10.41□□□□□ -0.74
COL8A1-201ENST00000261037 STPG2Q8N412 459 aa10.41□□□□□ -0.74
COL8A1-201ENST00000261037 SGMS2Q8NHU3 365 aa10.41□□□□□ -0.74
COL8A1-201ENST00000261037 ADIPOR1Q96A54 375 aa10.41□□□□□ -0.74
COL8A1-201ENST00000261037 MEGF10Q96KG7 1140 aa10.41□□□□□ -0.74
COL8A1-201ENST00000261037 TMEM74BQ9NUR3 256 aa10.41□□□□□ -0.74
COL8A1-201ENST00000261037 IGHV3-48P01763 117 aa10.4□□□□□ -0.74
COL8A1-201ENST00000261037 ZNF273Q14593 569 aa10.4□□□□□ -0.74
COL8A1-201ENST00000261037 C19orf54Q5BKX5 351 aa10.4□□□□□ -0.74
COL8A1-201ENST00000261037 WNT2BQ93097 391 aa10.4□□□□□ -0.74
COL8A1-201ENST00000261037 GPR146Q96CH1 333 aa10.4□□□□□ -0.74
COL8A1-201ENST00000261037 CALYQ9NYX4 217 aa10.4□□□□□ -0.74
COL8A1-201ENST00000261037 FSTP19883 344 aa10.4□□□□□ -0.74
COL8A1-201ENST00000261037 CTSSP25774 331 aa10.4□□□□□ -0.74
COL8A1-201ENST00000261037 RND2P52198 227 aa10.4□□□□□ -0.74
COL8A1-201ENST00000261037 RPL8P62917 257 aaKnown RBP10.4□□□□□ -0.74
COL8A1-201ENST00000261037 TMEM222Q9H0R3 208 aa10.4□□□□□ -0.74
COL8A1-201ENST00000261037 IGLV1-36A0A0B4J1U3 117 aa10.4□□□□□ -0.74
COL8A1-201ENST00000261037 RPLP1P05386 114 aaKnown RBP10.4□□□□□ -0.74
COL8A1-201ENST00000261037 FGF5P12034 268 aa10.4□□□□□ -0.74
COL8A1-201ENST00000261037 COMPP49747 757 aaPredicted RBP10.4□□□□□ -0.74
COL8A1-201ENST00000261037 ZNF345Q14585 488 aa10.4□□□□□ -0.74
COL8A1-201ENST00000261037 IBA57Q5T440 356 aaKnown RBP10.4□□□□□ -0.74
COL8A1-201ENST00000261037 HSPB7Q9UBY9 170 aa10.4□□□□□ -0.74
COL8A1-201ENST00000261037 HS3ST3B1Q9Y662 390 aa10.4□□□□□ -0.74
COL8A1-201ENST00000261037 ATG2BQ96BY7 2078 aa10.4□□□□□ -0.74
COL8A1-201ENST00000261037 hCG_38984A0A1B0GV85 526 aa10.4□□□□□ -0.74
COL8A1-201ENST00000261037 PGPA6NDG6 321 aa10.4□□□□□ -0.74
COL8A1-201ENST00000261037 AHRRA9YTQ3 701 aa10.4□□□□□ -0.74
COL8A1-201ENST00000261037 HKR1P10072 659 aa10.4□□□□□ -0.74
COL8A1-201ENST00000261037 MARS2Q96GW9 593 aaKnown RBP10.4□□□□□ -0.74
COL8A1-201ENST00000261037 RARRES2Q99969 163 aa10.4□□□□□ -0.74
COL8A1-201ENST00000261037 KCNE5Q9UJ90 142 aa10.4□□□□□ -0.74
COL8A1-201ENST00000261037 PPIAL4CA0A0B4J2A2 164 aa10.4□□□□□ -0.75
COL8A1-201ENST00000261037 IGKV3OR2-268A0A0C4DH90 116 aa10.4□□□□□ -0.75
COL8A1-201ENST00000261037 TRBV5-5A0A0J9YX44 114 aa10.4□□□□□ -0.75
COL8A1-201ENST00000261037 A6NDN8 102 aa10.4□□□□□ -0.75
COL8A1-201ENST00000261037 FBLL1A6NHQ2 334 aaKnown RBP10.4□□□□□ -0.75
COL8A1-201ENST00000261037 PPIAL4GP0DN37 164 aa10.4□□□□□ -0.75
COL8A1-201ENST00000261037 AMMECR1LQ6DCA0 310 aa10.4□□□□□ -0.75
COL8A1-201ENST00000261037 LINC01560Q8TB33 94 aa10.4□□□□□ -0.75
COL8A1-201ENST00000261037 SLC25A33Q9BSK2 321 aa10.4□□□□□ -0.75
COL8A1-201ENST00000261037 DLL3Q9NYJ7 618 aa10.4□□□□□ -0.75
COL8A1-201ENST00000261037 ZNFX1Q9P2E3 1918 aaKnown RBP10.39□□□□□ -0.75
COL8A1-201ENST00000261037 FCARP24071 287 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 P2RY6Q15077 328 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 COX19Q49B96 90 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 FAM53AQ6NSI3 398 aaPredicted RBP10.39□□□□□ -0.75
COL8A1-201ENST00000261037 KLF14Q8TD94 323 aaPredicted RBP10.39□□□□□ -0.75
COL8A1-201ENST00000261037 RAB37Q96AX2 223 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 CCL19Q99731 98 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 SCNM1Q9BWG6 230 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 SH3BGRL3Q9H299 93 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 ZFP30Q9Y2G7 519 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 ZG16O60844 167 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 CA2P00918 260 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 HLA-DQB1P01920 261 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 OTX1P32242 354 aaPredicted RBP10.39□□□□□ -0.75
COL8A1-201ENST00000261037 ID4P47928 161 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 UNC119Q13432 240 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 EIF4EBP2Q13542 120 aaPredicted RBP10.39□□□□□ -0.75
COL8A1-201ENST00000261037 PEAR1Q5VY43 1037 aaPredicted RBP10.39□□□□□ -0.75
COL8A1-201ENST00000261037 PQLC2Q6ZP29 291 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 H1FOOQ8IZA3 346 aaPredicted RBP10.39□□□□□ -0.75
COL8A1-201ENST00000261037 NUDT16L1Q9BRJ7 211 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms