RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 LHX4Q969G2 390 aa4.53□□□□□ -1.68
TRAPPC13-201ENST00000231526 FAHD2AQ96GK7 314 aa4.53□□□□□ -1.68
TRAPPC13-201ENST00000231526 DPCDQ9BVM2 203 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC13-201ENST00000231526 CXXC4Q9H2H0 198 aa4.53□□□□□ -1.68
TRAPPC13-201ENST00000231526 UBTD1Q9HAC8 227 aa4.53□□□□□ -1.68
TRAPPC13-201ENST00000231526 BARX1Q9HBU1 254 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC13-201ENST00000231526 ZC4H2Q9NQZ6 224 aa4.53□□□□□ -1.68
TRAPPC13-201ENST00000231526 RCC2Q9P258 522 aaKnown RBP4.53□□□□□ -1.68
TRAPPC13-201ENST00000231526 OPN4Q9UHM6 478 aa4.53□□□□□ -1.68
TRAPPC13-201ENST00000231526 OSGIN2Q9Y236 505 aa4.53□□□□□ -1.68
TRAPPC13-201ENST00000231526 USF3Q68DE3 2245 aa4.53□□□□□ -1.68
TRAPPC13-201ENST00000231526 CCL21O00585 134 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 SH2D1BO14796 132 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 WNT9BO14905 357 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 SPRY3O43610 288 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 OR2A4O95047 310 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 DUS4LO95620 317 aaKnown RBP4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 HEXAP06865 529 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 SCTP09683 121 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 RCC1P18754 421 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 PMELP40967 661 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 RPS23P62266 143 aaKnown RBP4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 FHL3Q13643 280 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 GUK1Q16774 197 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 LRRC37A5PQ49AS3 106 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 CXorf66Q5JRM2 361 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 DCAF12L2Q5VW00 463 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 Q6ZPA2 131 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 C5orf24Q7Z6I8 188 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 OR4A16Q8NH70 328 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 TMEM171Q8WVE6 324 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 SEC22AQ96IW7 307 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 OR2A7Q96R45 310 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 NRIP2Q9BQI9 281 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 RTBDNQ9BSG5 229 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 TRAF4Q9BUZ4 470 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 RHOFQ9HBH0 211 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 GSN-AS1Q9NRJ2 163 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 PIPOXQ9P0Z9 390 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 MLXQ9UH92 298 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 PITPNC1Q9UKF7 332 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 PPP1R3CQ9UQK1 317 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 FOXA2Q9Y261 457 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 TEX13DA0A0J9YY54 714 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 KIR2DS1A0A191URI9 304 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 CBY3A6NI87 242 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 CEACAM18A8MTB9 384 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 PSPNO60542 156 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 HAND1O96004 215 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 NAPSAO96009 420 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 IGHV3-13P01766 116 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 LINC00614P0C842 121 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 KIR2DS4P43632 304 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 PIGPP57054 158 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 ERVK11-1P61568 191 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 HERV-K104P61576 105 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 RPL11P62913 178 aaKnown RBP4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 KIR2DS1Q14954 304 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 ATXN7L3Q14CW9 347 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 ZNF146Q15072 292 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 SURF2Q15527 256 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 ABCA11PQ4W5N1 156 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 ZNF660Q6AZW8 331 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 DHRS11Q6UWP2 260 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 WDR82Q6UXN9 313 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 PEG10Q86TG7 708 aaKnown RBP4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 COMMD7Q86VX2 200 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 BOLLQ8N9W6 283 aaKnown RBP4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 WIPF2Q8TF74 440 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 IL1F10Q8WWZ1 152 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 ERGIC1Q969X5 290 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 TMEM230Q96A57 120 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 OR2V2Q96R30 315 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 MCRIP2Q9BUT9 160 aaKnown RBP4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 LIME1Q9H400 295 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 Q9N2K0 584 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 GCM1Q9NP62 436 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 PRR13Q9NZ81 148 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 TAAR3PQ9P1P4 343 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 NDRG3Q9UGV2 375 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 GLS2Q9UI32 602 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 TRAPPC2LQ9UL33 140 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 MEMO1Q9Y316 297 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 DSCAMO60469 2012 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 FXYD6-FXYD2A0A087WZ82 144 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 TRAV39A0A0B4J263 110 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 LOC102723971A0A1B0GUV8 181 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 LINC00862A6NCI5 91 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 RFPL4AA6NLU0 287 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 RFPL4AL1F8VTS6 287 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 PPYP01298 95 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 SERPINE2P07093 398 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 ZNF728P0DKX0 622 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 RRASP10301 218 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 BSPH1Q075Z2 132 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 EXOSC2Q13868 293 aaKnown RBP4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 SMIM21Q3B7S5 101 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 SPIN3Q5JUX0 258 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 ADAM5Q6NVV9 412 aa4.52□□□□□ -1.69
TRAPPC13-201ENST00000231526 Q6P435 159 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms