RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 SOX8P57073 446 aa12.78□□□□□ -0.36
SPTLC2-201ENST00000216484 SAMD13Q5VXD3 122 aa12.78□□□□□ -0.36
SPTLC2-201ENST00000216484 CADM4Q8NFZ8 388 aa12.78□□□□□ -0.36
SPTLC2-201ENST00000216484 TSC2P49815 1807 aa12.78□□□□□ -0.36
SPTLC2-201ENST00000216484 C17orf99Q6UX52 265 aa12.78□□□□□ -0.36
SPTLC2-201ENST00000216484 SH2D5Q6ZV89 423 aa12.78□□□□□ -0.36
SPTLC2-201ENST00000216484 NFAM1Q8NET5 270 aaPredicted RBP12.78□□□□□ -0.36
SPTLC2-201ENST00000216484 SRSF12Q8WXF0 261 aaKnown RBP12.78□□□□□ -0.36
SPTLC2-201ENST00000216484 PLXNA1Q9UIW2 1896 aa12.78□□□□□ -0.36
SPTLC2-201ENST00000216484 PRR32B1ATL7 298 aa12.78□□□□□ -0.36
SPTLC2-201ENST00000216484 GZMHP20718 246 aa12.78□□□□□ -0.36
SPTLC2-201ENST00000216484 TEX29Q8N6K0 151 aa12.78□□□□□ -0.36
SPTLC2-201ENST00000216484 MPC1Q9Y5U8 109 aa12.78□□□□□ -0.36
SPTLC2-201ENST00000216484 TDGF1P13385 188 aa12.78□□□□□ -0.36
SPTLC2-201ENST00000216484 SCNM1Q9BWG6 230 aa12.78□□□□□ -0.36
SPTLC2-201ENST00000216484 ZBP1Q9H171 429 aa12.78□□□□□ -0.36
SPTLC2-201ENST00000216484 ARL14EPLP0DKL9 152 aa12.78□□□□□ -0.36
SPTLC2-201ENST00000216484 SRIP30626 198 aa12.78□□□□□ -0.36
SPTLC2-201ENST00000216484 AMER3Q8N944 861 aa12.78□□□□□ -0.36
SPTLC2-201ENST00000216484 NDUFA3O95167 84 aa12.77□□□□□ -0.36
SPTLC2-201ENST00000216484 SNAI3Q3KNW1 292 aa12.77□□□□□ -0.36
SPTLC2-201ENST00000216484 ASB10Q8WXI3 467 aa12.77□□□□□ -0.36
SPTLC2-201ENST00000216484 ZNF414Q96IQ9 312 aa12.77□□□□□ -0.36
SPTLC2-201ENST00000216484 CRYBG1Q9Y4K1 1723 aa12.77□□□□□ -0.36
SPTLC2-201ENST00000216484 MT-ND6P03923 174 aa12.77□□□□□ -0.36
SPTLC2-201ENST00000216484 SNRPD3P62318 126 aaKnown RBP12.77□□□□□ -0.36
SPTLC2-201ENST00000216484 CTAG1AP78358 180 aa12.77□□□□□ -0.36
SPTLC2-201ENST00000216484 NIT1Q86X76 327 aa12.77□□□□□ -0.36
SPTLC2-201ENST00000216484 PGLYRP3Q96LB9 341 aa12.77□□□□□ -0.36
SPTLC2-201ENST00000216484 RGPD4Q7Z3J3 1758 aa12.77□□□□□ -0.37
SPTLC2-201ENST00000216484 HCP5Q6MZN7 132 aa12.77□□□□□ -0.37
SPTLC2-201ENST00000216484 STPG2Q8N412 459 aa12.77□□□□□ -0.37
SPTLC2-201ENST00000216484 DIRC2Q96SL1 478 aa12.77□□□□□ -0.37
SPTLC2-201ENST00000216484 TRBV20OR9-2A0A075B6H5 130 aa12.77□□□□□ -0.37
SPTLC2-201ENST00000216484 A0A0B4J2E0 115 aa12.77□□□□□ -0.37
SPTLC2-201ENST00000216484 A0A1B0GX12 115 aa12.77□□□□□ -0.37
SPTLC2-201ENST00000216484 SCAND1P57086 179 aa12.77□□□□□ -0.37
SPTLC2-201ENST00000216484 CLEC2AQ6UVW9 174 aa12.77□□□□□ -0.37
SPTLC2-201ENST00000216484 FAM159AQ6UWV7 190 aa12.77□□□□□ -0.37
SPTLC2-201ENST00000216484 A0A1W2PPE3 182 aa12.77□□□□□ -0.37
SPTLC2-201ENST00000216484 HBBP68871 147 aa12.77□□□□□ -0.37
SPTLC2-201ENST00000216484 LHFPL5Q8TAF8 219 aa12.77□□□□□ -0.37
SPTLC2-201ENST00000216484 MS4A3Q96HJ5 214 aa12.77□□□□□ -0.37
SPTLC2-201ENST00000216484 BCL2P10415 239 aa12.77□□□□□ -0.37
SPTLC2-201ENST00000216484 CDKN2AP42771 156 aaKnown RBP12.77□□□□□ -0.37
SPTLC2-201ENST00000216484 ALKAL1Q6UXT8 129 aa12.77□□□□□ -0.37
SPTLC2-201ENST00000216484 NT5CQ8TCD5 201 aa12.77□□□□□ -0.37
SPTLC2-201ENST00000216484 PTP4A1Q93096 173 aa12.77□□□□□ -0.37
SPTLC2-201ENST00000216484 WFIKKN1Q96NZ8 548 aa12.77□□□□□ -0.37
SPTLC2-201ENST00000216484 FLRT3Q9NZU0 649 aa12.77□□□□□ -0.37
SPTLC2-201ENST00000216484 ZNF98A6NK75 572 aa12.76□□□□□ -0.37
SPTLC2-201ENST00000216484 C17orf51A8MQB3 221 aa12.76□□□□□ -0.37
SPTLC2-201ENST00000216484 LMO7DNF2Z398 122 aa12.76□□□□□ -0.37
SPTLC2-201ENST00000216484 TMEM250H0YL14 139 aa12.76□□□□□ -0.37
SPTLC2-201ENST00000216484 RRHO14718 337 aa12.76□□□□□ -0.37
SPTLC2-201ENST00000216484 TRGC1P0CF51 173 aa12.76□□□□□ -0.37
SPTLC2-201ENST00000216484 IGLV3-10A0A075B6K4 115 aa12.76□□□□□ -0.37
SPTLC2-201ENST00000216484 CFDP00746 253 aaPredicted RBP12.76□□□□□ -0.37
SPTLC2-201ENST00000216484 VSTM2LQ96N03 204 aa12.76□□□□□ -0.37
SPTLC2-201ENST00000216484 TMEFF2Q9UIK5 374 aaPredicted RBP12.76□□□□□ -0.37
SPTLC2-201ENST00000216484 SSC5DA1L4H1 1573 aa12.76□□□□□ -0.37
SPTLC2-201ENST00000216484 COL10A1Q03692 680 aa12.76□□□□□ -0.37
SPTLC2-201ENST00000216484 THSD4Q6ZMP0 1018 aa12.76□□□□□ -0.37
SPTLC2-201ENST00000216484 CHODLQ9H9P2 273 aa12.76□□□□□ -0.37
SPTLC2-201ENST00000216484 SEC11BP0C7V7 166 aa12.76□□□□□ -0.37
SPTLC2-201ENST00000216484 LINC00869P0C866 280 aa12.76□□□□□ -0.37
SPTLC2-201ENST00000216484 ATP6V0CP27449 155 aa12.76□□□□□ -0.37
SPTLC2-201ENST00000216484 RAE1P78406 368 aaKnown RBP12.76□□□□□ -0.37
SPTLC2-201ENST00000216484 PAQR9Q6ZVX9 377 aa12.76□□□□□ -0.37
SPTLC2-201ENST00000216484 RNASEH2CQ8TDP1 164 aaKnown RBP12.76□□□□□ -0.37
SPTLC2-201ENST00000216484 BTAF1O14981 1849 aa12.76□□□□□ -0.37
SPTLC2-201ENST00000216484 OR6X1Q8NH79 312 aa12.76□□□□□ -0.37
SPTLC2-201ENST00000216484 NXT2Q9NPJ8 142 aaKnown RBP12.76□□□□□ -0.37
SPTLC2-201ENST00000216484 ASB1Q9Y576 335 aa12.76□□□□□ -0.37
SPTLC2-201ENST00000216484 CNRIP1Q96F85 164 aaPredicted RBP12.76□□□□□ -0.37
SPTLC2-201ENST00000216484 EML6Q6ZMW3 1958 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 CTSVO60911 334 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 MUC1P15941 1255 aaPredicted RBP12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 STARD6P59095 220 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 PAPPA-AS1Q5QFB9 102 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 OR11H7Q8NGC8 314 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 EDA2RQ9HAV5 297 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 RNF7Q9UBF6 113 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 TNFRSF18Q9Y5U5 241 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 C9JCJ5 164 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 TMEM50AO95807 157 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 PF4P02776 101 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 GABRG2P18507 467 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 RPS20P60866 119 aaKnown RBP12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 PSG9Q00887 426 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 ACER2Q5QJU3 275 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 FGF14Q92915 247 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 KCPQ6ZWJ8 1503 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 GGTLC2Q14390 218 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 KIAA1644Q3SXP7 199 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 GUSBP11Q6P575 273 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 KIR3DL3Q8N743 410 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 NEUROG1Q92886 237 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 R4GN57 208 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 SPTAN1Q13813 2472 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 185.5 ms