RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 B4GALT7Q9UBV7 327 aa13.98□□□□□ -0.17
HNRNPU-228ENST00000640306 CLN8Q9UBY8 286 aa13.98□□□□□ -0.17
HNRNPU-228ENST00000640306 SEC14L6B5MCN3 397 aa13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 ZNF737O75373 536 aa13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 CER1O95813 267 aa13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 ARR3P36575 388 aa13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 HBG1P69891 147 aa13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 HBG2P69892 147 aa13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 SLC38A11Q08AI6 406 aa13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 GAMTQ14353 236 aa13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 NRN1LQ496H8 165 aa13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 SMIM7Q9BQ49 75 aa13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 DEFB127Q9H1M4 99 aa13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 SDF2L1Q9HCN8 221 aa13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 FOXJ2Q9P0K8 574 aa13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 GAB2Q9UQC2 676 aa13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 NXPH2O95156 264 aa13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 CYB5R3P00387 301 aaPredicted RBP13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 PMP22Q01453 160 aa13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 LRRC75BQ2VPJ9 315 aa13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 DPPA3Q6W0C5 159 aa13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 RPP25LQ8N5L8 163 aaKnown RBP13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 OR2J1Q9GZK6 312 aa13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 WDR61Q9GZS3 305 aaKnown RBP13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 TMEM9BQ9NQ34 198 aa13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 UFSP2Q9NUQ7 469 aa13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 CACNA1HO95180 2353 aa13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 SS18L1O75177 396 aaPredicted RBP13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 IL18BPO95998 194 aa13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 RNPS1Q15287 305 aaKnown RBP13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 BTNL3Q6UXE8 466 aa13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 SCCPDHQ8NBX0 429 aa13.97□□□□□ -0.17
HNRNPU-228ENST00000640306 TRAV1-1A0A0B4J248 108 aa13.96□□□□□ -0.17
HNRNPU-228ENST00000640306 TAF15Q92804 592 aaKnown RBP eCLIP13.96□□□□□ -0.17
HNRNPU-228ENST00000640306 POM121Q96HA1 1249 aa13.96□□□□□ -0.17
HNRNPU-228ENST00000640306 MPC1Q9Y5U8 109 aa13.96□□□□□ -0.17
HNRNPU-228ENST00000640306 BOD1L1Q8NFC6 3051 aa13.96□□□□□ -0.17
HNRNPU-228ENST00000640306 TNRC6AQ8NDV7 1962 aaKnown RBP13.96□□□□□ -0.18
HNRNPU-228ENST00000640306 OR5H1A6NKK0 313 aa13.96□□□□□ -0.18
HNRNPU-228ENST00000640306 OR5B21A6NL26 309 aa13.96□□□□□ -0.18
HNRNPU-228ENST00000640306 RBMXL2O75526 392 aaKnown RBP13.96□□□□□ -0.18
HNRNPU-228ENST00000640306 IDH3GP51553 393 aaPredicted RBP13.96□□□□□ -0.18
HNRNPU-228ENST00000640306 LURAP1LQ8IV03 231 aa13.96□□□□□ -0.18
HNRNPU-228ENST00000640306 TPRX1Q8N7U7 411 aa13.96□□□□□ -0.18
HNRNPU-228ENST00000640306 OR1L1Q8NH94 360 aa13.96□□□□□ -0.18
HNRNPU-228ENST00000640306 PLPPR2Q96GM1 343 aa13.96□□□□□ -0.18
HNRNPU-228ENST00000640306 VAX2Q9UIW0 290 aa13.96□□□□□ -0.18
HNRNPU-228ENST00000640306 J3QT63 122 aa13.95□□□□□ -0.18
HNRNPU-228ENST00000640306 YKT6O15498 198 aa13.95□□□□□ -0.18
HNRNPU-228ENST00000640306 TMEM41BQ5BJD5 291 aa13.95□□□□□ -0.18
HNRNPU-228ENST00000640306 ACSM6Q6P461 480 aa13.95□□□□□ -0.18
HNRNPU-228ENST00000640306 UNQ6494/PRO21346Q6UXR6 183 aa13.95□□□□□ -0.18
HNRNPU-228ENST00000640306 ZDHHC16Q969W1 377 aa13.95□□□□□ -0.18
HNRNPU-228ENST00000640306 WDYHV1Q96HA8 205 aa13.95□□□□□ -0.18
HNRNPU-228ENST00000640306 PRDM13Q9H4Q3 707 aa13.95□□□□□ -0.18
HNRNPU-228ENST00000640306 LIN7CQ9NUP9 197 aaKnown RBP13.95□□□□□ -0.18
HNRNPU-228ENST00000640306 TREM2Q9NZC2 230 aa13.95□□□□□ -0.18
HNRNPU-228ENST00000640306 MRPS18CQ9Y3D5 142 aaKnown RBP13.95□□□□□ -0.18
HNRNPU-228ENST00000640306 SPENQ96T58 3664 aaKnown RBP13.95□□□□□ -0.18
HNRNPU-228ENST00000640306 ZNF729A6NN14 1252 aaPredicted RBP13.95□□□□□ -0.18
HNRNPU-228ENST00000640306 WNT9BO14905 357 aa13.95□□□□□ -0.18
HNRNPU-228ENST00000640306 COX5BP10606 129 aa13.95□□□□□ -0.18
HNRNPU-228ENST00000640306 CD81P60033 236 aa13.95□□□□□ -0.18
HNRNPU-228ENST00000640306 RPL30P62888 115 aaKnown RBP13.95□□□□□ -0.18
HNRNPU-228ENST00000640306 ZNF826PQ6ZT77 177 aa13.95□□□□□ -0.18
HNRNPU-228ENST00000640306 C16orf82Q7Z2V1 217 aa13.95□□□□□ -0.18
HNRNPU-228ENST00000640306 MBD3L1Q8WWY6 194 aa13.95□□□□□ -0.18
HNRNPU-228ENST00000640306 LSM10Q969L4 123 aaKnown RBP13.95□□□□□ -0.18
HNRNPU-228ENST00000640306 ELOVL1Q9BW60 279 aa13.95□□□□□ -0.18
HNRNPU-228ENST00000640306 OR2D2Q9H210 308 aa13.95□□□□□ -0.18
HNRNPU-228ENST00000640306 AURKAIP1Q9NWT8 199 aaPredicted RBP13.95□□□□□ -0.18
HNRNPU-228ENST00000640306 LNP1A1A4G5 178 aa13.94□□□□□ -0.18
HNRNPU-228ENST00000640306 C9orf172C9J069 976 aa13.94□□□□□ -0.18
HNRNPU-228ENST00000640306 OR3A1P47881 315 aa13.94□□□□□ -0.18
HNRNPU-228ENST00000640306 DEFA6Q01524 100 aa13.94□□□□□ -0.18
HNRNPU-228ENST00000640306 OR52L2PQ8NGH6 319 aa13.94□□□□□ -0.18
HNRNPU-228ENST00000640306 B4E171 279 aa13.94□□□□□ -0.18
HNRNPU-228ENST00000640306 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.94□□□□□ -0.18
HNRNPU-228ENST00000640306 TSPAN7P41732 249 aa13.94□□□□□ -0.18
HNRNPU-228ENST00000640306 NCR3LG1Q68D85 454 aa13.94□□□□□ -0.18
HNRNPU-228ENST00000640306 ZNF497Q6ZNH5 498 aa13.94□□□□□ -0.18
HNRNPU-228ENST00000640306 GTF3AQ92664 365 aaKnown RBP13.94□□□□□ -0.18
HNRNPU-228ENST00000640306 LAMP3Q9UQV4 416 aa13.94□□□□□ -0.18
HNRNPU-228ENST00000640306 TRBV6-6A0A0A6YYG2 114 aa13.94□□□□□ -0.18
HNRNPU-228ENST00000640306 IGHV3-43A0A0B4J1X8 118 aa13.94□□□□□ -0.18
HNRNPU-228ENST00000640306 B4DEV8 164 aa13.94□□□□□ -0.18
HNRNPU-228ENST00000640306 GALR2O43603 387 aaPredicted RBP13.94□□□□□ -0.18
HNRNPU-228ENST00000640306 PSPNO60542 156 aa13.94□□□□□ -0.18
HNRNPU-228ENST00000640306 IGHV3-43DP0DP04 118 aa13.94□□□□□ -0.18
HNRNPU-228ENST00000640306 MRGPRGQ86SM5 289 aa13.94□□□□□ -0.18
HNRNPU-228ENST00000640306 PACRGQ96M98 296 aaPredicted RBP13.94□□□□□ -0.18
HNRNPU-228ENST00000640306 GFOD1Q9NXC2 390 aa13.94□□□□□ -0.18
HNRNPU-228ENST00000640306 SLC25A6P12236 298 aa13.93□□□□□ -0.18
HNRNPU-228ENST00000640306 GPX4P36969 197 aaPredicted RBP13.93□□□□□ -0.18
HNRNPU-228ENST00000640306 TFF3Q07654 80 aa13.93□□□□□ -0.18
HNRNPU-228ENST00000640306 PNRC1Q12796 327 aaPredicted RBP13.93□□□□□ -0.18
HNRNPU-228ENST00000640306 LTC4SQ16873 150 aa13.93□□□□□ -0.18
HNRNPU-228ENST00000640306 LINC00596Q86U02 117 aa13.93□□□□□ -0.18
HNRNPU-228ENST00000640306 GCNT2Q8N0V5 402 aa13.93□□□□□ -0.18
HNRNPU-228ENST00000640306 SVILO95425 2214 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms